RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 PGAP3Q96FM1 320 aaPredicted RBP13.58□□□□□ -0.24
COPS3-214ENST00000577246 OSBPL1AQ9BXW6 950 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 PIGVQ9NUD9 493 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 HECAQ9UBI9 543 aaPredicted RBP13.58□□□□□ -0.24
COPS3-214ENST00000577246 PCDHGC3Q9UN70 934 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 SPTA1P02549 2419 aa13.58□□□□□ -0.24
COPS3-214ENST00000577246 NAV2Q8IVL1 2488 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 IGLV3-10A0A075B6K4 115 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 C16orf96A6NNT2 1141 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 RNF103O00237 685 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 SUV39H1O43463 412 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 PPFIA2O75334 1257 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 ZNF821O75541 412 aaPredicted RBP13.57□□□□□ -0.24
COPS3-214ENST00000577246 TSHRP16473 764 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 CCKBRP32239 447 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 SULT1E1P49888 294 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 DEUP1Q05D60 604 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 SRSF1Q07955 248 aaKnown RBP eCLIP13.57□□□□□ -0.24
COPS3-214ENST00000577246 C1orf61Q13536 156 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 POLD3Q15054 466 aaPredicted RBP13.57□□□□□ -0.24
COPS3-214ENST00000577246 MANEAQ5SRI9 462 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 PASD1Q8IV76 773 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 ZNF683Q8IZ20 524 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 FMR1NBQ8N0W7 255 aaPredicted RBP13.57□□□□□ -0.24
COPS3-214ENST00000577246 RYBPQ8N488 228 aaPredicted RBP13.57□□□□□ -0.24
COPS3-214ENST00000577246 OR7D4Q8NG98 312 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 CENPTQ96BT3 561 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 NPY6RQ99463 290 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 ZYG11BQ9C0D3 744 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.57□□□□□ -0.24
COPS3-214ENST00000577246 MPP6Q9NZW5 540 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 GULP1Q9UBP9 304 aa13.57□□□□□ -0.24
COPS3-214ENST00000577246 TMEM110-MUSTN1A8MSY1 372 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 TM7SF2O76062 418 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 FGFR1OPO95684 399 aaKnown RBP13.56□□□□□ -0.24
COPS3-214ENST00000577246 RPLP0P05388 317 aaKnown RBP13.56□□□□□ -0.24
COPS3-214ENST00000577246 CTSEP14091 401 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 HTR1BP28222 390 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 KRT9P35527 623 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 MARSP56192 900 aaKnown RBP13.56□□□□□ -0.24
COPS3-214ENST00000577246 SNRPD1P62314 119 aaKnown RBP13.56□□□□□ -0.24
COPS3-214ENST00000577246 GNA12Q03113 381 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 PTK2Q05397 1052 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 TPRG1LQ5T0D9 272 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 KLHL10Q6JEL2 608 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 TTI2Q6NXR4 508 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 VPS36Q86VN1 386 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 GKN2Q86XP6 184 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 WDTC1Q8N5D0 677 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 ATL2Q8NHH9 583 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 CXorf40AQ8TE69 158 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 CCDC74AQ96AQ1 378 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 HAPLN3Q96S86 360 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 CPEB1Q9BZB8 566 aaKnown RBP13.56□□□□□ -0.24
COPS3-214ENST00000577246 TCEAL2Q9H3H9 227 aaPredicted RBP13.56□□□□□ -0.24
COPS3-214ENST00000577246 ACP6Q9NPH0 428 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 PISDQ9UG56 409 aa13.56□□□□□ -0.24
COPS3-214ENST00000577246 FCF1Q9Y324 198 aaKnown RBP13.56□□□□□ -0.24
COPS3-214ENST00000577246 NOBOXO60393 691 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 SRGAP2O75044 1071 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 ZMPSTE24O75844 475 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 RASGRP1O95267 797 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 GSRP00390 522 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 ERBB2P04626 1255 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 FAM87AP0C7U9 286 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 CD82P27701 267 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 IGFALSP35858 605 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 EIF4A3P38919 411 aaKnown RBP13.55□□□□□ -0.24
COPS3-214ENST00000577246 ABL2P42684 1182 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 PEX5P50542 639 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 HK3P52790 923 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 ARF5P84085 180 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 RAD51Q06609 339 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 SLC25A52Q3SY17 297 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 COLEC12Q5KU26 742 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 B3GNT8Q7Z7M8 397 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 KYQ8NBH2 561 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 PCDH19Q8TAB3 1148 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 NELFBQ8WX92 580 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 NT5C3BQ969T7 300 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 CMKLR1Q99788 373 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 FOXP3Q9BZS1 431 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 TM6SF2Q9BZW4 377 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 CLPBQ9H078 707 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 RETREG1Q9H6L5 497 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 SIRPGQ9P1W8 387 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 HPCAL4Q9UM19 191 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 GPR34Q9UPC5 381 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 ITM2BQ9Y287 266 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 LOXL2Q9Y4K0 774 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 PCDHGA4Q9Y5G9 962 aa13.55□□□□□ -0.24
COPS3-214ENST00000577246 A0A1W2PQC6 194 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 KRIT1O00522 736 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 POP4O95707 220 aaKnown RBP13.54□□□□□ -0.24
COPS3-214ENST00000577246 ITGB6P18564 788 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 SCNN1AP37088 669 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 RNASE9P60153 205 aaKnown RBP13.54□□□□□ -0.24
COPS3-214ENST00000577246 TGIF1Q15583 401 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 ARHGAP44Q17R89 818 aa13.54□□□□□ -0.24
COPS3-214ENST00000577246 TMEM164Q5U3C3 297 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms