RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 FAM90A2PQ658T7 463 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 C16orf89Q6UX73 402 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 KIAA1324Q6UXG2 1013 aaKnown RBP4.67□□□□□ -1.66
LINC00393-202ENST00000452852 RINLQ6ZS11 566 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 ZNF551Q7Z340 670 aaPredicted RBP4.67□□□□□ -1.66
LINC00393-202ENST00000452852 AMIGO2Q86SJ2 522 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 CCDC191Q8NCU4 936 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 CLEC4CQ8WTT0 213 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 CELF1Q92879 486 aaKnown RBP4.67□□□□□ -1.66
LINC00393-202ENST00000452852 GLG1Q92896 1179 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 CUL5Q93034 780 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 ARRDC3Q96B67 414 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 PPP1R10Q96QC0 940 aaKnown RBP4.67□□□□□ -1.66
LINC00393-202ENST00000452852 PIGSQ96S52 555 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 AP1M1Q9BXS5 423 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 MROH8Q9H579 483 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 ARHGEF3Q9NR81 526 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 PCDHB16Q9NRJ7 776 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 SERTAD4Q9NUC0 356 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 SEPT11Q9NVA2 429 aaKnown RBP4.67□□□□□ -1.66
LINC00393-202ENST00000452852 FBXO28Q9NVF7 368 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 TBC1D14Q9P2M4 693 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 ADAM21Q9UKJ8 722 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 ECM29Q5VYK3 1845 aa4.67□□□□□ -1.66
LINC00393-202ENST00000452852 TBC1D3DA0A087WVF3 549 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TBC1D3IA0A087WXS9 549 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TBC1D3EA0A087X179 549 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TBC1D3KA0A087X1G2 549 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 hCG_1807616A0A1W2PRN6 198 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 GXYLT2A0PJZ3 443 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TBC1D3BA6NDS4 549 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TBC1D3FA6NER0 549 aaPredicted RBP4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TBC1D3LB9A6J9 549 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 GCOM1H8Y6P7 765 aaPredicted RBP4.66□□□□□ -1.66
LINC00393-202ENST00000452852 SLC16A3O15427 465 aaKnown RBP4.66□□□□□ -1.66
LINC00393-202ENST00000452852 NXPH3O95157 252 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 DNTTP04053 509 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 PCCAP05165 728 aaPredicted RBP4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TBC1D3HP0C7X1 549 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 EBLN1P0CF75 366 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 ACADMP11310 421 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 LYL1P12980 280 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 EPHA8P29322 1005 aaPredicted RBP4.66□□□□□ -1.66
LINC00393-202ENST00000452852 GALNSP34059 522 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 LIPAP38571 399 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 MLH1P40692 756 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 CCT8P50990 548 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 CLCN2P51788 898 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 RCAN1P53805 252 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 HUNKP57058 714 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 C21orf58P58505 322 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 NHLH1Q02575 133 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 CAMK1Q14012 370 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 CLCA4Q14CN2 919 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 FAM133BQ5BKY9 247 aaKnown RBP4.66□□□□□ -1.66
LINC00393-202ENST00000452852 RILPL1Q5EBL4 403 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TREML2Q5T2D2 321 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 C1QTNF12Q5T7M4 302 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TEDDM1Q5T9Z0 273 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TBC1D3GQ6DHY5 549 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TBC1D3CQ6IPX1 549 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 DPY19L3Q6ZPD9 716 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 KRT77Q7Z794 578 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 PXKQ7Z7A4 578 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 CAND1Q86VP6 1230 aaKnown RBP4.66□□□□□ -1.66
LINC00393-202ENST00000452852 P3H2Q8IVL5 708 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TBC1D3Q8IZP1 549 aaPredicted RBP4.66□□□□□ -1.66
LINC00393-202ENST00000452852 LSM14AQ8ND56 463 aaKnown RBP4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TBC1D16Q8TBP0 767 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 SLC2A12Q8TD20 617 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 RUFY2Q8WXA3 655 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 NPIPB3Q92617 1050 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 SARAFQ96BY9 339 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 ELP4Q96EB1 424 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 PRR11Q96HE9 360 aaPredicted RBP4.66□□□□□ -1.66
LINC00393-202ENST00000452852 CLPBQ9H078 707 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 BRF2Q9HAW0 419 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 PLSCR4Q9NRQ2 329 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 TMLHEQ9NVH6 421 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 NKX1-2Q9UD57 310 aaPredicted RBP4.66□□□□□ -1.66
LINC00393-202ENST00000452852 POLLQ9UGP5 575 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 PCDHGB4Q9UN71 923 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 GDAQ9Y2T3 454 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 PCDHB2Q9Y5E7 798 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 COL4A1P02462 1669 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 PCSK5Q92824 1860 aa4.66□□□□□ -1.66
LINC00393-202ENST00000452852 A0A1B0GUL6 1792 aa4.65□□□□□ -1.66
LINC00393-202ENST00000452852 PAPPA2Q9BXP8 1791 aa4.65□□□□□ -1.66
LINC00393-202ENST00000452852 CCDC187A0A096LP49 1063 aa4.65□□□□□ -1.67
LINC00393-202ENST00000452852 SH2D7A6NKC9 451 aaPredicted RBP4.65□□□□□ -1.67
LINC00393-202ENST00000452852 TSPY2A6NKD2 308 aa4.65□□□□□ -1.67
LINC00393-202ENST00000452852 TSPAN4O14817 238 aa4.65□□□□□ -1.67
LINC00393-202ENST00000452852 TULP3O75386 442 aa4.65□□□□□ -1.67
LINC00393-202ENST00000452852 ZNF853P0CG23 659 aa4.65□□□□□ -1.67
LINC00393-202ENST00000452852 TSPY3P0CV98 308 aa4.65□□□□□ -1.67
LINC00393-202ENST00000452852 TSPY8P0CW00 308 aa4.65□□□□□ -1.67
LINC00393-202ENST00000452852 CD19P15391 556 aa4.65□□□□□ -1.67
LINC00393-202ENST00000452852 PORP16435 677 aaPredicted RBP4.65□□□□□ -1.67
LINC00393-202ENST00000452852 ZNF37AP17032 561 aaPredicted RBP4.65□□□□□ -1.67
LINC00393-202ENST00000452852 NDUFB7P17568 137 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms