RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 FHOD3Q2V2M9 1422 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 GRIN2DO15399 1336 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 FRMPD4Q14CM0 1322 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 MYOM3Q5VTT5 1437 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 RNF103-CHMP3A0A140T963 221 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TRPC5OSA6NMA1 111 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 UPK3BL1B0FP48 263 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 UPK3BL2E5RIL1 263 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 RNF103O00237 685 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TAF4O00268 1085 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ATP2A1O14983 1001 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 EIF3DO15371 548 aaKnown RBP eCLIP3.54□□□□□ -1.84
UBR3-208ENST00000474426 PRODHO43272 600 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 SCO2O43819 266 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 VPS4BO75351 444 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ZNF821O75541 412 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 GSTP1P09211 210 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 TGM1P22735 817 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PKLRP30613 574 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 HTR7P34969 479 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 GP5P40197 560 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 MDH1P40925 334 aaKnown RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 OAZ1P54368 228 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 NAGLUP54802 743 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CDH4P55283 916 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 SKP1P63208 163 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 FCHO2Q0JRZ9 810 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 SLAQ13239 276 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 DRP2Q13474 957 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 NAB1Q13506 487 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 DYRK1AQ13627 763 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PMS2P11Q13670 270 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 MORF4L2Q15014 288 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PTPRRQ15256 657 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 TYSND1Q2T9J0 566 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 CNPY1Q3B7I2 92 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 LIPNQ5VXI9 398 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 KRT40Q6A162 431 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 KIF18BQ86Y91 864 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 OFCC1Q8IZS5 231 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PRCCQ92733 491 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 BPIFA3Q9BQP9 254 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 SH2D3AQ9BRG2 576 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 BDH2Q9BUT1 245 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 OPN3Q9H1Y3 402 aaPredicted RBP3.54□□□□□ -1.84
UBR3-208ENST00000474426 IL26Q9NPH9 171 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 P4HTMQ9NXG6 502 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 ADAMTS6Q9UKP5 1117 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 PCDHB10Q9UN67 800 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 SNX7Q9UNH6 387 aa3.54□□□□□ -1.84
UBR3-208ENST00000474426 FAM205AQ6ZU69 1335 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 ZNF521Q96K83 1311 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 CCDC144AA2RUR9 1427 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 OR6C70A6NIJ9 312 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 ZNF233A6NK53 670 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 TOR1AO14656 332 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 PFDN6O15212 129 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 TOX3O15405 576 aaPredicted RBP3.53□□□□□ -1.84
UBR3-208ENST00000474426 B4GAT1O43505 415 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 NUDT21O43809 227 aaKnown RBP3.53□□□□□ -1.84
UBR3-208ENST00000474426 LGI1O95970 557 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 CALB1P05937 261 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 GNAO1P09471 354 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 CSF1P09603 554 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 ACADMP11310 421 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 POU3F2P20265 443 aaPredicted RBP3.53□□□□□ -1.84
UBR3-208ENST00000474426 CCND1P24385 295 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 TYK2P29597 1187 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 SPAM1P38567 509 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 BUD31P41223 144 aaPredicted RBP3.53□□□□□ -1.84
UBR3-208ENST00000474426 MAGEA1P43355 309 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 CSNK1DP48730 415 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 ZNF165P49910 485 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 BCAR1P56945 870 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 UBE3AQ05086 875 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 RASGEF1BQ0VAM2 473 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 KCNJ8Q15842 424 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 PNLIPRP3Q17RR3 467 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 RALGPS1Q5JS13 557 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 CCNJQ5T5M9 372 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 ALS2CLQ60I27 953 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 OR5M10Q6IEU7 315 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 FUT10Q6P4F1 479 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 NXPE4Q6UWF7 544 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 SHISA2Q6UWI4 295 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 PEX26Q7Z412 305 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 TAC4Q86UU9 113 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 LIX1LQ8IVB5 337 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 CCDC28AQ8IWP9 274 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 BBS7Q8IWZ6 715 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 TIGD4Q8IY51 512 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 GJD3Q8N144 294 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 ARHGAP24Q8N264 748 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 PPM1KQ8N3J5 372 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 SLC15A4Q8N697 577 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 ARFGAP2Q8N6H7 521 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 EIF1ADQ8N9N8 165 aaKnown RBP3.53□□□□□ -1.84
UBR3-208ENST00000474426 MINDY2Q8NBR6 621 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 BBS1Q8NFJ9 593 aa3.53□□□□□ -1.84
UBR3-208ENST00000474426 OR10J5Q8NHC4 309 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms