RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 COPG1Q9Y678 874 aaKnown RBP24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 USP3Q9Y6I4 520 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 GIPC1O14908 333 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 H2AFYO75367 372 aaKnown RBP24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 HOXD12P35452 270 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 GRIA4P48058 902 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 PSME3P61289 254 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 SLC2A14Q8TDB8 520 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 RNF139Q8WU17 664 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 IPO11Q9UI26 975 aaKnown RBP24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 VANGL2Q9ULK5 521 aa24.3■■□□□ 1.48
CSNK1E-203ENST00000396832 FUCA1P04066 466 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 ALDH2P05091 517 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 BCAP31P51572 246 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 HMBOX1Q6NT76 420 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 LYSMD3Q7Z3D4 306 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 CENPSQ8N2Z9 138 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 PPWD1Q96BP3 646 aaKnown RBP24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 CORO1BQ9BR76 489 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 DRC3Q9H069 523 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 ARMC7Q9H6L4 198 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 PCDHGA7Q9Y5G6 932 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 FAM72CH0Y354 149 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 GAS2O43903 313 aaKnown RBP24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 ADAM23O75077 832 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 GABRB3P28472 473 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 SPRP35270 261 aaPredicted RBP24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 RXRGP48443 463 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 ADIGQ0VDE8 80 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 FAM72AQ5TYM5 149 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 FAM72DQ6L9T8 149 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 NANOGP8Q6NSW7 305 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 CYP2R1Q6VVX0 501 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 FAM72BQ86X60 149 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 CCNYL1Q8N7R7 359 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 RNF169Q8NCN4 708 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 TBC1D15Q8TC07 691 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 LPGAT1Q92604 370 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 HNRNPABQ99729 332 aaKnown RBP24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 VRTNQ9H8Y1 702 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 CXorf21Q9HAI6 301 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 GOLGA2P5Q9HBQ8 144 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 TUBA8Q9NY65 449 aaPredicted RBP24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 SUCOQ9UBS9 1254 aaKnown RBP24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 ZNF112Q9UJU3 913 aa24.29■■□□□ 1.48
CSNK1E-203ENST00000396832 FAM155AB1AL88 458 aaPredicted RBP24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 E7ENX8 843 aa24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 CLDN5O00501 218 aa24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 NDUFV1P49821 464 aa24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 TTC33Q6PID6 262 aaPredicted RBP24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 RPS27LQ71UM5 84 aaKnown RBP24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 TFAP2CQ92754 450 aa24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 RPF2Q9H7B2 306 aaKnown RBP24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 GJD2Q9UKL4 321 aa24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 KCNU1A8MYU2 1149 aa24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 K7EPI3 171 aa24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 SOCS7O14512 581 aa24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 LIMK2P53671 638 aa24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 IL31Q6EBC2 164 aa24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 C16orf87Q6PH81 154 aa24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 ISL2Q96A47 359 aa24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 ACE2Q9BYF1 805 aaPredicted RBP24.28■■□□□ 1.48
CSNK1E-203ENST00000396832 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.28■■□□□ 1.481e-8■■□□□ 12.8
CSNK1E-203ENST00000396832 GNAO1P09471 354 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 TGFB3P10600 412 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 HDCP19113 662 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 UGT1A6P19224 532 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 UGT1A1P22309 533 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 UGT1A4P22310 534 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 UGT1A3P35503 534 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 UGT1A5P35504 534 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 TNFAIP2Q03169 654 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 CCDC92Q53HC0 331 aaPredicted RBP24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 CLEC14AQ86T13 490 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 KCTD4Q8WVF5 259 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 NEURL2Q9BR09 285 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 KLK14Q9P0G3 267 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 ADAM28Q9UKQ2 775 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 A0A1W2PPW3 197 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 H3BMQ9 156 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 SOCS2O14508 198 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 RALGDSQ12967 914 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 ATP1A4Q13733 1029 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 GK5Q6ZS86 529 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 CHSY3Q70JA7 882 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 SLC15A3Q8IY34 581 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 COG8Q96MW5 612 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 APBA2Q99767 749 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 GPATCH1Q9BRR8 931 aaKnown RBP24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 NAT9Q9BTE0 207 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 SNX10Q9Y5X0 201 aa24.27■■□□□ 1.48
CSNK1E-203ENST00000396832 HTR3EA5X5Y0 456 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 TRIM64CA6NLI5 447 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 HBP1O60381 514 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 E2F6O75461 281 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 MT-CO1P00395 513 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 MPOP05164 745 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 AKAP5P24588 427 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 SLC7A1P30825 629 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms