RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 VAPBO95292 243 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 C22orf31O95567 290 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 PRKCGP05129 697 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 NCAM1P13591 858 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 PGAM1P18669 254 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 NFKB1P19838 968 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 CDH15P55291 814 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 GJA9P57773 515 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 MPP3Q13368 585 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 LAMC2Q13753 1193 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 ARHGAP17Q68EM7 881 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 RASAL3Q86YV0 1011 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 NAT14Q8WUY8 206 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 EZH1Q92800 747 aaPredicted RBP10.93□□□□□ -0.66
LSS-208ENST00000474319 ATP6V1E2Q96A05 226 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 RPL26L1Q9UNX3 145 aaKnown RBP10.93□□□□□ -0.66
LSS-208ENST00000474319 MTF2Q9Y483 593 aaPredicted RBP10.93□□□□□ -0.66
LSS-208ENST00000474319 AP4B1Q9Y6B7 739 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 KCNU1A8MYU2 1149 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 HBP1O60381 514 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 RECQL4O94761 1208 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 ENDOD1O94919 500 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 USP17L7P0C7H9 530 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 PTPN1P18031 435 aaKnown RBP10.93□□□□□ -0.66
LSS-208ENST00000474319 ERCC2P18074 760 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 PROZP22891 400 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 ARHGAP1Q07960 439 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 GRIK4Q16099 956 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 KCNMB4Q86W47 210 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 FAM110BQ8TC76 370 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 SLC35F5Q8WV83 523 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 EME1Q96AY2 570 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 ZFP42Q96MM3 310 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 QKIQ96PU8 341 aaKnown RBP eCLIP10.93□□□□□ -0.66
LSS-208ENST00000474319 PKP2Q99959 881 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 MRPL1Q9BYD6 325 aaKnown RBP10.93□□□□□ -0.66
LSS-208ENST00000474319 ACE2Q9BYF1 805 aaPredicted RBP10.93□□□□□ -0.66
LSS-208ENST00000474319 PIGVQ9NUD9 493 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 DDIT4Q9NX09 232 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 SNX13Q9Y5W8 968 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 SCN1AP35498 2009 aa10.93□□□□□ -0.66
LSS-208ENST00000474319 TSPAN1O60635 241 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 PFDN1O60925 122 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 GCATO75600 419 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 MT-ND1P03886 318 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 ICAM3P32942 547 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 CHN2P52757 468 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 USP46P62068 366 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 FAM110CQ1W6H9 321 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 NADK2Q4G0N4 442 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 HABP4Q5JVS0 413 aaKnown RBP10.92□□□□□ -0.66
LSS-208ENST00000474319 ARCQ7LC44 396 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 ARHGAP22Q7Z5H3 698 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 IFNEQ86WN2 208 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 NT5DC4Q86YG4 428 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 MYO1HQ8N1T3 1032 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.92□□□□□ -0.66
LSS-208ENST00000474319 OR9I1Q8NGQ6 314 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 SLC4A5Q9BY07 1137 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 CDH19Q9H159 772 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 ABHD16BQ9H3Z7 469 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 PNPLA8Q9NP80 782 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 SF3B1O75533 1304 aaKnown RBP eCLIP10.92□□□□□ -0.665e-10■■■■■ 120.6
LSS-208ENST00000474319 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.92□□□□□ -0.66
LSS-208ENST00000474319 FAM149AA5PLN7 773 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 FDFT1P37268 417 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 CASP2P42575 452 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 TPI1P60174 286 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 CDKL1Q00532 357 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 SH2D4BQ5SQS7 431 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 TMCO4Q5TGY1 634 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 SEL1L3Q68CR1 1132 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 ARHGAP36Q6ZRI8 547 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 ACAD11Q709F0 780 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 PQLC1Q8N2U9 271 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 VPS39Q96JC1 886 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 TRAPPC9Q96Q05 1148 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 ILKAPQ9H0C8 392 aaPredicted RBP10.92□□□□□ -0.66
LSS-208ENST00000474319 XPR1Q9UBH6 696 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 AURKAO14965 403 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 BIRC5O15392 142 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 TRIM13O60858 407 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 CRTAMO95727 393 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 UGT1A6P19224 532 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 CEACAM7Q14002 265 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 CYLC2Q14093 348 aaPredicted RBP10.92□□□□□ -0.66
LSS-208ENST00000474319 PPP1R3AQ16821 1122 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 TAPT1Q6NXT6 567 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 BNC2Q6ZN30 1099 aaPredicted RBP10.92□□□□□ -0.66
LSS-208ENST00000474319 KYQ8NBH2 561 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 ZNF512Q96ME7 567 aaPredicted RBP10.92□□□□□ -0.66
LSS-208ENST00000474319 NR1H4Q96RI1 486 aaPredicted RBP10.92□□□□□ -0.66
LSS-208ENST00000474319 DCUN1D5Q9BTE7 237 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 WDR41Q9HAD4 459 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 PREBQ9HCU5 417 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 VCX3AQ9NNX9 186 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 SLC2A6Q9UGQ3 507 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 AURKCQ9UQB9 309 aa10.92□□□□□ -0.66
LSS-208ENST00000474319 GNEQ9Y223 722 aaKnown RBP10.92□□□□□ -0.66
LSS-208ENST00000474319 NRP1O14786 923 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms