RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 YKT6O15498 198 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 MSI1O43347 362 aaKnown RBP6.07□□□□□ -1.44
VPS33B-207ENST00000557470 SIN3BO75182 1162 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 RNASEH2AO75792 299 aaKnown RBP6.07□□□□□ -1.44
VPS33B-207ENST00000557470 ZBED1O96006 694 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 NR3C1P04150 777 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 ATP5BP06576 529 aaKnown RBP6.07□□□□□ -1.44
VPS33B-207ENST00000557470 CD53P19397 219 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 SYT1P21579 422 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 GLDCP23378 1020 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 CD38P28907 300 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 CD70P32970 193 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 ACTN2P35609 894 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 ARRB1P49407 418 aaPredicted RBP6.07□□□□□ -1.44
VPS33B-207ENST00000557470 HARS2P49590 506 aaKnown RBP6.07□□□□□ -1.44
VPS33B-207ENST00000557470 TKTL1P51854 596 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 NXPH1P58417 271 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 BNIP3Q12983 259 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 CUL4AQ13619 759 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 CUL4BQ13620 913 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 STK38Q15208 465 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 CST6Q15828 149 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 HNRNPA1L2Q32P51 320 aaKnown RBP6.07□□□□□ -1.44
VPS33B-207ENST00000557470 TAF1BQ53T94 588 aaPredicted RBP6.07□□□□□ -1.44
VPS33B-207ENST00000557470 RAB41Q5JT25 222 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 ADGRF1Q5T601 910 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 SFMBT2Q5VUG0 894 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 SHC4Q6S5L8 630 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 C1orf229Q6ZS94 237 aaPredicted RBP6.07□□□□□ -1.44
VPS33B-207ENST00000557470 BHLHA9Q7RTU4 235 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 PIGZQ86VD9 579 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 JAMLQ86YT9 394 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 SLC9A9Q8IVB4 645 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 GRAMD1CQ8IYS0 662 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 ZNF295-AS1Q8N0V1 137 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 ARHGAP18Q8N392 663 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 DCBLD1Q8N8Z6 715 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 IQUBQ8NA54 791 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 OR2T34Q8NGX1 318 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 GOLGA5Q8TBA6 731 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 TAS1R2Q8TE23 839 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 RFFLQ8WZ73 363 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 SKA1Q96BD8 255 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 ANAPC16Q96DE5 110 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 TMA16Q96EY4 203 aaKnown RBP6.07□□□□□ -1.44
VPS33B-207ENST00000557470 ABHD17AQ96GS6 310 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 MYO19Q96H55 970 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 SLC39A13Q96H72 371 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 NAF1Q96HR8 494 aaKnown RBP6.07□□□□□ -1.44
VPS33B-207ENST00000557470 SERAC1Q96JX3 654 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 HEXIM2Q96MH2 286 aaKnown RBP6.07□□□□□ -1.44
VPS33B-207ENST00000557470 LGMNQ99538 433 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 IMPG2Q9BZV3 1241 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 SEMA4CQ9C0C4 833 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 NEUROG2Q9H2A3 272 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 KCTD10Q9H3F6 313 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 MAGEF1Q9HAY2 307 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 CYP3A43Q9HB55 503 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 CPNE5Q9HCH3 593 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 FBXL12Q9NXK8 326 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 SUN2Q9UH99 717 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 STOML2Q9UJZ1 356 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 CLCA2Q9UQC9 943 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 NCKAP1Q9Y2A7 1128 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 PCDHB1Q9Y5F3 818 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 PTPN13Q12923 2485 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 MYLKQ15746 1914 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 ARID1BQ8NFD5 2236 aaPredicted RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 COL12A1Q99715 3063 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 UBR5O95071 2799 aaPredicted RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 GOLGA6L7A0A1B0GV03 622 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 PVALEFA0A1B0GWK0 134 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 CAPN8A6NHC0 703 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 LRRC72A6NJI9 287 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 TTC34A8MYJ7 566 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 ALG1L2C9J202 215 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 TLR4O00206 839 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 TULP2O00295 520 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 IKBKBO14920 756 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 POLR2DO15514 142 aaKnown RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 KLRC4O43908 158 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 BNIP3LO60238 219 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 TBL1XO60907 577 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 RNASEH1O60930 286 aaKnown RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 SDC3O75056 442 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 LATS1O95835 1130 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 TRIM49P0CI25 452 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 TRIM49CP0CI26 452 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 PCSK2P16519 638 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 CKMT2P17540 419 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 POLR2EP19388 210 aaKnown RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 CSKP41240 450 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 AFMP43652 599 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 GCLMP48507 274 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 PSMD8P48556 350 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 CCR5P51681 352 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 ADPRHP54922 357 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 PCBP4P57723 403 aaKnown RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 ZNF445P59923 1031 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 PPP2CBP62714 309 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms