RNA–Protein interactions for RNA: YPR038W

IRC16, Transcript of Dubious open reading frame, yeast

Gene IRC16, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC16	YPR038W	KAR5	Q04746	504 aa		4.7	□□□□□ -1.66
IRC16	YPR038W	YLR122C	Q12312	125 aa		4.7	□□□□□ -1.66
IRC16	YPR038W	TY1A-NL1	Q12391	440 aa	Known RBP	4.7	□□□□□ -1.66
IRC16	YPR038W	YKR073C	P36153	106 aa		4.69	□□□□□ -1.66
IRC16	YPR038W	SAF1	P38352	637 aa		4.69	□□□□□ -1.66
IRC16	YPR038W	AKR1	P39010	764 aa		4.69	□□□□□ -1.66
IRC16	YPR038W	BOL3	P39724	118 aa		4.69	□□□□□ -1.66
IRC16	YPR038W	SUT1	P53032	299 aa	Known RBP	4.69	□□□□□ -1.66
IRC16	YPR038W	YGR130C	P53278	816 aa		4.69	□□□□□ -1.66
IRC16	YPR038W	NAM7	P30771	971 aa	Known RBP	4.68	□□□□□ -1.66
IRC16	YPR038W	BOI1	P38041	980 aa	Known RBP	4.68	□□□□□ -1.66
IRC16	YPR038W	TOS1	P38288	455 aa		4.68	□□□□□ -1.66
IRC16	YPR038W	NTA1	P40354	457 aa		4.68	□□□□□ -1.66
IRC16	YPR038W	YIL165C	P40446	119 aa		4.68	□□□□□ -1.66
IRC16	YPR038W	AIM46	P38885	310 aa		4.67	□□□□□ -1.66
IRC16	YPR038W	RAD55	P38953	406 aa		4.67	□□□□□ -1.66
IRC16	YPR038W	ATG1	P53104	897 aa		4.67	□□□□□ -1.66
IRC16	YPR038W	GLO3	P38682	493 aa	Known RBP	4.66	□□□□□ -1.66
IRC16	YPR038W	INP51	P40559	946 aa	Known RBP	4.66	□□□□□ -1.66
IRC16	YPR038W	ACF4	P47129	309 aa		4.66	□□□□□ -1.66
IRC16	YPR038W	UFD2	P54860	961 aa		4.66	□□□□□ -1.66
IRC16	YPR038W	RPB10	P22139	70 aa		4.65	□□□□□ -1.67
IRC16	YPR038W	IRS4	P36115	615 aa	Known RBP	4.65	□□□□□ -1.67
IRC16	YPR038W	PAN5	P38787	379 aa		4.65	□□□□□ -1.67
IRC16	YPR038W	QDR1	P40475	563 aa		4.65	□□□□□ -1.67
IRC16	YPR038W	RGD2	P43556	714 aa		4.65	□□□□□ -1.67
IRC16	YPR038W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
IRC16	YPR038W	CYC7	P00045	113 aa		4.64	□□□□□ -1.67
IRC16	YPR038W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
IRC16	YPR038W	KTR2	P33550	425 aa		4.64	□□□□□ -1.67
IRC16	YPR038W	PSY2	P40164	858 aa		4.64	□□□□□ -1.67
IRC16	YPR038W	GUP1	P53154	560 aa		4.64	□□□□□ -1.67
IRC16	YPR038W	EMG1	Q06287	252 aa	Known RBP	4.64	□□□□□ -1.67
IRC16	YPR038W	REC8	Q12188	680 aa		4.64	□□□□□ -1.67
IRC16	YPR038W	LEM3	P42838	414 aa		4.63	□□□□□ -1.67
IRC16	YPR038W	BRE4	Q07660	1125 aa		4.63	□□□□□ -1.67
IRC16	YPR038W	TIF6	Q12522	245 aa	Known RBP	4.63	□□□□□ -1.67
IRC16	YPR038W	MAE1	P36013	669 aa	Known RBP	4.62	□□□□□ -1.67
IRC16	YPR038W	SPO74	P45819	413 aa		4.62	□□□□□ -1.67
IRC16	YPR038W	BIO5	P53744	561 aa	Known RBP	4.62	□□□□□ -1.67
IRC16	YPR038W	FUS1	P11710	512 aa		4.61	□□□□□ -1.67
IRC16	YPR038W	CTH1	P47976	325 aa		4.61	□□□□□ -1.67
IRC16	YPR038W	TRS120	Q04183	1289 aa		4.61	□□□□□ -1.67
IRC16	YPR038W	HAT1	Q12341	374 aa		4.61	□□□□□ -1.67
IRC16	YPR038W	YBL113C	Q7M4S9	792 aa		4.61	□□□□□ -1.67
IRC16	YPR038W	TRL1	P09880	827 aa	Known RBP	4.6	□□□□□ -1.67
IRC16	YPR038W	GRS1	P38088	690 aa	Known RBP	4.6	□□□□□ -1.67
IRC16	YPR038W	NEO1	P40527	1151 aa		4.6	□□□□□ -1.67
IRC16	YPR038W	SPO71	Q03868	1245 aa		4.6	□□□□□ -1.67
IRC16	YPR038W	SOG2	Q08817	791 aa		4.6	□□□□□ -1.67
IRC16	YPR038W	ERP5	P38819	212 aa		4.59	□□□□□ -1.67
IRC16	YPR038W	ALD3	P54114	506 aa		4.59	□□□□□ -1.67
IRC16	YPR038W	RSC4	Q02206	625 aa		4.59	□□□□□ -1.67
IRC16	YPR038W	MAG2	Q06436	670 aa	Known RBP	4.59	□□□□□ -1.67
IRC16	YPR038W	MSB1	P21339	1137 aa	Known RBP	4.58	□□□□□ -1.68
IRC16	YPR038W	TFA2	P36145	328 aa		4.58	□□□□□ -1.68
IRC16	YPR038W	POL5	P39985	1022 aa	Known RBP	4.58	□□□□□ -1.68
IRC16	YPR038W	YNL011C	P53980	444 aa		4.58	□□□□□ -1.68
IRC16	YPR038W	ELG1	Q12050	791 aa		4.58	□□□□□ -1.68
IRC16	YPR038W	PYC2	P32327	1180 aa	Known RBP	4.57	□□□□□ -1.68
IRC16	YPR038W	ECM2	P38241	364 aa	Known RBP	4.57	□□□□□ -1.68
IRC16	YPR038W	MDJ2	P42834	146 aa		4.57	□□□□□ -1.68
IRC16	YPR038W	NCE103	P53615	221 aa		4.57	□□□□□ -1.68
IRC16	YPR038W	CDC55	Q00362	526 aa		4.57	□□□□□ -1.68
IRC16	YPR038W	AOS1	Q06624	347 aa		4.57	□□□□□ -1.68
IRC16	YPR038W	BSC2	Q05611	235 aa		4.56	□□□□□ -1.68
IRC16	YPR038W	GIC2	Q06648	383 aa		4.56	□□□□□ -1.68
IRC16	YPR038W	ERS1	P17261	260 aa		4.55	□□□□□ -1.68
IRC16	YPR038W	SSF1	P38789	453 aa	Predicted RBP	4.55	□□□□□ -1.68
IRC16	YPR038W	STM1	P39015	273 aa	Known RBP	4.55	□□□□□ -1.68
IRC16	YPR038W	YJR124C	P47159	448 aa		4.55	□□□□□ -1.68
IRC16	YPR038W	KIP3	P53086	805 aa	Known RBP	4.55	□□□□□ -1.68
IRC16	YPR038W	GLO4	Q12320	285 aa		4.55	□□□□□ -1.68
IRC16	YPR038W	HVG1	P0CE11	249 aa		4.54	□□□□□ -1.68
IRC16	YPR038W	FET4	P40988	552 aa		4.54	□□□□□ -1.68
IRC16	YPR038W	YNR065C	P53751	1116 aa		4.54	□□□□□ -1.68
IRC16	YPR038W	FAR11	P53917	953 aa		4.54	□□□□□ -1.68
IRC16	YPR038W	SDH1	Q00711	640 aa		4.54	□□□□□ -1.68
IRC16	YPR038W	YMR074C	Q04773	145 aa		4.54	□□□□□ -1.68
IRC16	YPR038W	NUT2	Q06213	157 aa		4.54	□□□□□ -1.68
IRC16	YPR038W	MNL2	Q12205	849 aa		4.54	□□□□□ -1.68
IRC16	YPR038W	ELM1	P32801	640 aa		4.53	□□□□□ -1.68
IRC16	YPR038W	SAM37	P50110	327 aa		4.53	□□□□□ -1.68
IRC16	YPR038W	CTR9	P89105	1077 aa		4.53	□□□□□ -1.68
IRC16	YPR038W	MSH6	Q03834	1242 aa		4.53	□□□□□ -1.68
IRC16	YPR038W	FLP1	P03870	423 aa		4.52	□□□□□ -1.69
IRC16	YPR038W	YHL050C	P38721	697 aa		4.52	□□□□□ -1.69
IRC16	YPR038W	YHL008C	P38750	627 aa		4.52	□□□□□ -1.69
IRC16	YPR038W	CIC1	P38779	376 aa	Known RBP	4.52	□□□□□ -1.69
IRC16	YPR038W	YHR219W	P38900	624 aa		4.52	□□□□□ -1.69
IRC16	YPR038W	HAS1	Q03532	505 aa	Known RBP	4.52	□□□□□ -1.69
IRC16	YPR038W	NSI1	Q12457	570 aa		4.52	□□□□□ -1.69
IRC16	YPR038W	SEC20	P28791	383 aa		4.51	□□□□□ -1.69
IRC16	YPR038W	PPX1	P38698	397 aa		4.51	□□□□□ -1.69
IRC16	YPR038W	UBP5	P39944	805 aa		4.51	□□□□□ -1.69
IRC16	YPR038W	PMT7	Q06644	662 aa		4.51	□□□□□ -1.69
IRC16	YPR038W	NOC3	Q07896	663 aa	Predicted RBP	4.51	□□□□□ -1.69
IRC16	YPR038W	YLL054C	Q12244	843 aa		4.51	□□□□□ -1.69
IRC16	YPR038W	FRT1	Q99332	602 aa		4.51	□□□□□ -1.69
IRC16	YPR038W	RNQ1	P25367	405 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 56.3 ms