RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W MGA2P40578 1113 aa6.65□□□□□ -1.35
VPS5YOR069W HUL4P40985 892 aa6.65□□□□□ -1.35
VPS5YOR069W YLR407WQ06070 228 aa6.65□□□□□ -1.35
VPS5YOR069W LPD1P09624 499 aaKnown RBP6.64□□□□□ -1.35
VPS5YOR069W YOR223WQ12015 292 aa6.64□□□□□ -1.35
VPS5YOR069W PGI1P12709 554 aaKnown RBP6.64□□□□□ -1.35
VPS5YOR069W SDH5Q08230 162 aa6.64□□□□□ -1.35
VPS5YOR069W URB1P34241 1764 aaKnown RBP6.63□□□□□ -1.35
VPS5YOR069W RAD3P06839 778 aa6.63□□□□□ -1.35
VPS5YOR069W RGP1P16664 663 aa6.63□□□□□ -1.35
VPS5YOR069W SPT5P27692 1063 aaKnown RBP6.63□□□□□ -1.35
VPS5YOR069W SLA1P32790 1244 aa6.63□□□□□ -1.35
VPS5YOR069W YNL011CP53980 444 aa6.63□□□□□ -1.35
VPS5YOR069W YDR338CQ05497 695 aa6.63□□□□□ -1.35
VPS5YOR069W HCR1Q05775 265 aaKnown RBP6.63□□□□□ -1.35
VPS5YOR069W ESF1Q06344 628 aaKnown RBP6.63□□□□□ -1.35
VPS5YOR069W OSH2Q12451 1283 aa6.63□□□□□ -1.35
VPS5YOR069W HSP82P02829 709 aaKnown RBP6.62□□□□□ -1.35
VPS5YOR069W HXK1P04806 485 aaKnown RBP6.62□□□□□ -1.35
VPS5YOR069W CBF5P33322 483 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
VPS5YOR069W PXL1P36166 706 aa6.62□□□□□ -1.35
VPS5YOR069W CCC2P38995 1004 aa6.62□□□□□ -1.35
VPS5YOR069W MIC19P43594 170 aa6.62□□□□□ -1.35
VPS5YOR069W BOP3P53958 396 aa6.62□□□□□ -1.35
VPS5YOR069W YIL177CP40434 1758 aa6.62□□□□□ -1.35
VPS5YOR069W YJL225CP40889 1758 aa6.62□□□□□ -1.35
VPS5YOR069W TOP1P04786 769 aa6.62□□□□□ -1.35
VPS5YOR069W RAD1P06777 1100 aa6.62□□□□□ -1.35
VPS5YOR069W ARD1P07347 238 aaPredicted RBP6.62□□□□□ -1.35
VPS5YOR069W PEP3P27801 918 aa6.62□□□□□ -1.35
VPS5YOR069W IMP2'P32351 346 aa6.62□□□□□ -1.35
VPS5YOR069W MIF2P35201 549 aa6.62□□□□□ -1.35
VPS5YOR069W EPL1P43572 832 aa6.62□□□□□ -1.35
VPS5YOR069W YJR079WP47126 109 aa6.62□□□□□ -1.35
VPS5YOR069W HOT1Q03213 719 aa6.62□□□□□ -1.35
VPS5YOR069W ALE1Q08548 619 aa6.62□□□□□ -1.35
VPS5YOR069W PRP16P15938 1071 aaPredicted RBP6.61□□□□□ -1.35
VPS5YOR069W DAL7P21826 554 aa6.61□□□□□ -1.35
VPS5YOR069W CDC60P26637 1090 aaKnown RBP6.61□□□□□ -1.35
VPS5YOR069W SEC65P29478 273 aa6.61□□□□□ -1.35
VPS5YOR069W HEL1P36113 551 aa6.61□□□□□ -1.35
VPS5YOR069W ADE17P38009 592 aaKnown RBP6.61□□□□□ -1.35
VPS5YOR069W BUD16P39988 312 aa6.61□□□□□ -1.35
VPS5YOR069W YMR1P47147 688 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
VPS5YOR069W TAN1P53072 289 aaPredicted RBP6.61□□□□□ -1.35
VPS5YOR069W ECM23Q02710 187 aa6.61□□□□□ -1.35
VPS5YOR069W GFD1Q04839 188 aaKnown RBP6.61□□□□□ -1.35
VPS5YOR069W VAC14Q06708 880 aa6.61□□□□□ -1.35
VPS5YOR069W BNI1P41832 1953 aa6.61□□□□□ -1.35
VPS5YOR069W ZUO1P32527 433 aaKnown RBP6.6□□□□□ -1.35
VPS5YOR069W SAC6P32599 642 aaKnown RBP6.6□□□□□ -1.35
VPS5YOR069W NFU1P32860 256 aa6.6□□□□□ -1.35
VPS5YOR069W VPS8P39702 1274 aa6.6□□□□□ -1.35
VPS5YOR069W EPS1P40557 701 aa6.6□□□□□ -1.35
VPS5YOR069W HXT10P43581 546 aa6.6□□□□□ -1.35
VPS5YOR069W YJR008WP47085 338 aa6.6□□□□□ -1.35
VPS5YOR069W STE23Q06010 1027 aa6.6□□□□□ -1.35
VPS5YOR069W PRE10P21242 288 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
VPS5YOR069W SEC14P24280 304 aaKnown RBP6.6□□□□□ -1.35
VPS5YOR069W SMF1P38925 575 aa6.6□□□□□ -1.35
VPS5YOR069W NNF2P53253 936 aa6.6□□□□□ -1.35
VPS5YOR069W VTC3Q02725 835 aa6.6□□□□□ -1.35
VPS5YOR069W VPS30Q02948 557 aa6.6□□□□□ -1.35
VPS5YOR069W MDM38Q08179 573 aa6.6□□□□□ -1.35
VPS5YOR069W AFT2Q08957 416 aa6.6□□□□□ -1.35
VPS5YOR069W SEC23P15303 768 aaKnown RBP6.59□□□□□ -1.35
VPS5YOR069W PTC4P38089 393 aa6.59□□□□□ -1.35
VPS5YOR069W TRS85P46944 698 aa6.59□□□□□ -1.35
VPS5YOR069W RPL22AP05749 121 aaKnown RBP6.59□□□□□ -1.36
VPS5YOR069W DIT2P21595 489 aa6.59□□□□□ -1.36
VPS5YOR069W RAD51P25454 400 aa6.59□□□□□ -1.36
VPS5YOR069W YSW1P38280 609 aa6.59□□□□□ -1.36
VPS5YOR069W MCX1P38323 520 aaPredicted RBP6.59□□□□□ -1.36
VPS5YOR069W EFM2P38347 419 aa6.59□□□□□ -1.36
VPS5YOR069W VPS64Q03944 604 aa6.59□□□□□ -1.36
VPS5YOR069W SMC6Q12749 1114 aa6.59□□□□□ -1.36
VPS5YOR069W SSK22P25390 1331 aaPredicted RBP6.59□□□□□ -1.36
VPS5YOR069W TY4B-HP0C2J7 1802 aa6.58□□□□□ -1.36
VPS5YOR069W TY4B-JP47024 1803 aa6.58□□□□□ -1.36
VPS5YOR069W RAD53P22216 821 aa6.58□□□□□ -1.36
VPS5YOR069W CNS1P33313 385 aa6.58□□□□□ -1.36
VPS5YOR069W ISW1P38144 1129 aa6.58□□□□□ -1.36
VPS5YOR069W YJR142WP47173 342 aa6.58□□□□□ -1.36
VPS5YOR069W NUR1Q12066 484 aa6.58□□□□□ -1.36
VPS5YOR069W JIP3O13555 125 aa6.57□□□□□ -1.36
VPS5YOR069W PMR1P13586 950 aa6.57□□□□□ -1.36
VPS5YOR069W OPI1P21957 404 aa6.57□□□□□ -1.36
VPS5YOR069W YET1P35723 206 aa6.57□□□□□ -1.36
VPS5YOR069W SHM1P37292 490 aaPredicted RBP6.57□□□□□ -1.36
VPS5YOR069W OSH3P38713 996 aaKnown RBP6.57□□□□□ -1.36
VPS5YOR069W ATG3P40344 310 aa6.57□□□□□ -1.36
VPS5YOR069W EFM4P40516 257 aa6.57□□□□□ -1.36
VPS5YOR069W SEC26P41810 973 aaKnown RBP6.57□□□□□ -1.36
VPS5YOR069W FYV8P46949 817 aaKnown RBP6.57□□□□□ -1.36
VPS5YOR069W ERG5P54781 538 aa6.57□□□□□ -1.36
VPS5YOR069W EIS1Q05050 843 aaKnown RBP6.57□□□□□ -1.36
VPS5YOR069W NOP6Q07623 225 aaKnown RBP6.57□□□□□ -1.36
VPS5YOR069W HMI1Q12039 706 aa6.57□□□□□ -1.36
VPS5YOR069W RPS6AP0CX37 236 aaKnown RBP6.57□□□□□ -1.36
VPS5YOR069W RPS6BP0CX38 236 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms