RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W BIK1P11709 440 aa6.9□□□□□ -1.31
ATG4YNL223W IMP2'P32351 346 aa6.9□□□□□ -1.31
ATG4YNL223W CRG1P38892 291 aaRIP-Chip data6.9□□□□□ -1.31not detected
ATG4YNL223W CTF18P49956 741 aa6.9□□□□□ -1.31
ATG4YNL223W FLO1P32768 1537 aa6.89□□□□□ -1.31
ATG4YNL223W CHO2P05374 869 aaKnown RBP6.89□□□□□ -1.31
ATG4YNL223W ARG82P07250 355 aa6.89□□□□□ -1.31
ATG4YNL223W ICL1P28240 557 aaPredicted RBP6.89□□□□□ -1.31
ATG4YNL223W FBP26P32604 452 aa6.89□□□□□ -1.31
ATG4YNL223W YKU70P32807 602 aa6.89□□□□□ -1.31
ATG4YNL223W MDL2P33311 773 aa6.89□□□□□ -1.31
ATG4YNL223W YER156CP40093 338 aaKnown RBP6.89□□□□□ -1.31
ATG4YNL223W HST1P53685 503 aa6.89□□□□□ -1.31
ATG4YNL223W ARP5P53946 755 aa6.89□□□□□ -1.31
ATG4YNL223W HAP5Q02516 242 aa6.89□□□□□ -1.31
ATG4YNL223W PRP42Q03776 544 aaKnown RBP6.89□□□□□ -1.31
ATG4YNL223W ESF1Q06344 628 aaKnown RBP6.89□□□□□ -1.31
ATG4YNL223W SPN1Q06505 410 aaPredicted RBP6.89□□□□□ -1.31
ATG4YNL223W GAS5Q08193 484 aa6.89□□□□□ -1.31
ATG4YNL223W MATALPHA2P0CY08 210 aa6.88□□□□□ -1.31
ATG4YNL223W HMLALPHA2P0CY09 210 aa6.88□□□□□ -1.31
ATG4YNL223W CLC1P17891 233 aa6.88□□□□□ -1.31
ATG4YNL223W RER2P35196 286 aa6.88□□□□□ -1.31
ATG4YNL223W RRP8P38961 392 aaKnown RBP6.88□□□□□ -1.31
ATG4YNL223W GSM1P42950 618 aa6.88□□□□□ -1.31
ATG4YNL223W YHL017WP38745 532 aa6.87□□□□□ -1.31
ATG4YNL223W HYR1P40581 163 aaKnown RBP6.87□□□□□ -1.31
ATG4YNL223W YKE2P52553 114 aa6.87□□□□□ -1.31
ATG4YNL223W YGL081WP53156 320 aa6.87□□□□□ -1.31
ATG4YNL223W RPS15Q01855 142 aaKnown RBP6.87□□□□□ -1.31
ATG4YNL223W DPL1Q05567 589 aa6.87□□□□□ -1.31
ATG4YNL223W PSK2Q08217 1101 aa6.87□□□□□ -1.31
ATG4YNL223W CPA2P03965 1118 aaKnown RBP6.86□□□□□ -1.31
ATG4YNL223W PRX1P34227 261 aaKnown RBP6.86□□□□□ -1.31
ATG4YNL223W TTI1P36097 1038 aa6.86□□□□□ -1.31
ATG4YNL223W YHL050CP38721 697 aa6.86□□□□□ -1.31
ATG4YNL223W SLN1P39928 1220 aaPredicted RBP6.86□□□□□ -1.31
ATG4YNL223W CIR1P42940 261 aa6.86□□□□□ -1.31
ATG4YNL223W PIP2P52960 996 aa6.86□□□□□ -1.31
ATG4YNL223W NSG2P53898 299 aa6.86□□□□□ -1.31
ATG4YNL223W UFD2P54860 961 aa6.86□□□□□ -1.31
ATG4YNL223W YLR407WQ06070 228 aa6.86□□□□□ -1.31
ATG4YNL223W EST2Q06163 884 aa6.86□□□□□ -1.31
ATG4YNL223W ELG1Q12050 791 aa6.86□□□□□ -1.31
ATG4YNL223W YPL150WQ12152 901 aa6.86□□□□□ -1.31
ATG4YNL223W FLO11P08640 1367 aa6.86□□□□□ -1.31
ATG4YNL223W RPS7AP26786 190 aaKnown RBP6.85□□□□□ -1.31
ATG4YNL223W ARL1P38116 183 aaKnown RBP6.85□□□□□ -1.31
ATG4YNL223W RTS1P38903 757 aa6.85□□□□□ -1.31
ATG4YNL223W MGA2P40578 1113 aa6.85□□□□□ -1.31
ATG4YNL223W APL6P46682 809 aa6.85□□□□□ -1.31
ATG4YNL223W ENT3P47160 408 aa6.85□□□□□ -1.31
ATG4YNL223W PUS6P53294 404 aa6.85□□□□□ -1.31
ATG4YNL223W HDA1P53973 706 aa6.85□□□□□ -1.31
ATG4YNL223W RRG1Q12167 365 aaPredicted RBP6.85□□□□□ -1.31
ATG4YNL223W MBR1P23493 339 aa6.85□□□□□ -1.31
ATG4YNL223W MYO3P36006 1272 aa6.85□□□□□ -1.31
ATG4YNL223W SHC1P39000 512 aa6.85□□□□□ -1.31
ATG4YNL223W PTK2P47116 818 aaKnown RBP6.85□□□□□ -1.31
ATG4YNL223W PEX14P53112 341 aa6.85□□□□□ -1.31
ATG4YNL223W COG8Q04632 607 aa6.85□□□□□ -1.31
ATG4YNL223W MRD1Q06106 887 aaKnown RBP6.85□□□□□ -1.31
ATG4YNL223W ACK1Q07622 623 aaPredicted RBP6.85□□□□□ -1.31
ATG4YNL223W TOP1P04786 769 aa6.84□□□□□ -1.31
ATG4YNL223W KEX1P09620 729 aa6.84□□□□□ -1.31
ATG4YNL223W ANP1P32629 500 aa6.84□□□□□ -1.31
ATG4YNL223W SIS2P36024 562 aa6.84□□□□□ -1.31
ATG4YNL223W EPL1P43572 832 aa6.84□□□□□ -1.31
ATG4YNL223W CST9Q06032 482 aa6.84□□□□□ -1.31
ATG4YNL223W TFC6Q06339 672 aa6.84□□□□□ -1.31
ATG4YNL223W PEX19Q07418 342 aa6.84□□□□□ -1.31
ATG4YNL223W RPS9BP05755 195 aaKnown RBP6.83□□□□□ -1.32
ATG4YNL223W MST1P07236 462 aa6.83□□□□□ -1.32
ATG4YNL223W MPH3P0CE00 602 aa6.83□□□□□ -1.32
ATG4YNL223W AFG2P32794 780 aa6.83□□□□□ -1.32
ATG4YNL223W AKR1P39010 764 aa6.83□□□□□ -1.32
ATG4YNL223W BUD6P41697 788 aa6.83□□□□□ -1.32
ATG4YNL223W YPL260WQ08977 551 aa6.83□□□□□ -1.32
ATG4YNL223W AIM44Q99299 758 aa6.83□□□□□ -1.32
ATG4YNL223W RAD61Q99359 647 aa6.83□□□□□ -1.32
ATG4YNL223W PFK2P16862 959 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
ATG4YNL223W MRM1P25270 412 aa6.82□□□□□ -1.32
ATG4YNL223W KNS1P32350 737 aaPredicted RBP6.82□□□□□ -1.32
ATG4YNL223W ELM1P32801 640 aa6.82□□□□□ -1.32
ATG4YNL223W MAL33P38157 468 aa6.82□□□□□ -1.32
ATG4YNL223W RFC5P38251 354 aa6.82□□□□□ -1.32
ATG4YNL223W VID27P40157 782 aa6.82□□□□□ -1.32
ATG4YNL223W YJL171CP46992 396 aa6.82□□□□□ -1.32
ATG4YNL223W KRE33P53914 1056 aaKnown RBP6.82□□□□□ -1.32
ATG4YNL223W CBP3P21560 335 aa6.81□□□□□ -1.32
ATG4YNL223W RIT1P23796 513 aa6.81□□□□□ -1.32
ATG4YNL223W RDS1P25611 832 aa6.81□□□□□ -1.32
ATG4YNL223W PRO3P32263 286 aaKnown RBP6.81□□□□□ -1.32
ATG4YNL223W RVS167P39743 482 aaKnown RBP6.81□□□□□ -1.32
ATG4YNL223W KEL3Q08979 651 aaPredicted RBP6.81□□□□□ -1.32
ATG4YNL223W APC11Q12157 165 aa6.81□□□□□ -1.32
ATG4YNL223W GSC2P40989 1895 aa6.81□□□□□ -1.32
ATG4YNL223W FRS2P15625 503 aaKnown RBP6.8□□□□□ -1.32
ATG4YNL223W DIT2P21595 489 aa6.8□□□□□ -1.32
ATG4YNL223W MAK31P23059 88 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 1564.7 ms