RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	CIC1	P38779	376 aa	Known RBP	5.45	□□□□□ -1.54
TPM1	YNL079C	PRK1	P40494	810 aa		5.45	□□□□□ -1.54
TPM1	YNL079C	PPT1	P53043	513 aa		5.45	□□□□□ -1.54
TPM1	YNL079C	RSC2	Q06488	889 aa		5.45	□□□□□ -1.54
TPM1	YNL079C	INP54	Q08227	384 aa	Known RBP	5.45	□□□□□ -1.54
TPM1	YNL079C	COB	P00163	385 aa		5.44	□□□□□ -1.54
TPM1	YNL079C	PYC2	P32327	1180 aa	Known RBP	5.44	□□□□□ -1.54
TPM1	YNL079C	SEC8	P32855	1065 aa		5.44	□□□□□ -1.54
TPM1	YNL079C	RPT1	P33299	467 aa	Known RBP	5.44	□□□□□ -1.54
TPM1	YNL079C	YJR107W	P47145	328 aa		5.44	□□□□□ -1.54
TPM1	YNL079C	SNU71	P53207	620 aa	Known RBP	5.43	□□□□□ -1.54
TPM1	YNL079C	HPF1	Q05164	967 aa		5.43	□□□□□ -1.54
TPM1	YNL079C	MRP10	O75012	95 aa		5.42	□□□□□ -1.54
TPM1	YNL079C	DUR3	P33413	735 aa		5.42	□□□□□ -1.54
TPM1	YNL079C	ECM2	P38241	364 aa	Known RBP	5.42	□□□□□ -1.54
TPM1	YNL079C	YJL181W	P46987	611 aa		5.42	□□□□□ -1.54
TPM1	YNL079C	JJJ3	P47138	172 aa		5.42	□□□□□ -1.54
TPM1	YNL079C	YCS4	Q06156	1176 aa		5.42	□□□□□ -1.54
TPM1	YNL079C	DPH6	Q12429	685 aa		5.42	□□□□□ -1.54
TPM1	YNL079C	GPM1	P00950	247 aa	Known RBP	5.41	□□□□□ -1.54
TPM1	YNL079C	FUS1	P11710	512 aa		5.41	□□□□□ -1.54
TPM1	YNL079C	INP51	P40559	946 aa	Known RBP	5.41	□□□□□ -1.54
TPM1	YNL079C	MSH6	Q03834	1242 aa		5.41	□□□□□ -1.54
TPM1	YNL079C	TOS4	Q06266	489 aa		5.41	□□□□□ -1.54
TPM1	YNL079C	OXR1	Q08952	273 aa		5.41	□□□□□ -1.54
TPM1	YNL079C	DNA2	P38859	1522 aa		5.4	□□□□□ -1.54
TPM1	YNL079C	PDC5	P16467	563 aa	Known RBP	5.4	□□□□□ -1.54
TPM1	YNL079C	KNS1	P32350	737 aa	Predicted RBP	5.4	□□□□□ -1.54
TPM1	YNL079C	NUT1	P53114	1132 aa		5.4	□□□□□ -1.54
TPM1	YNL079C	YGR035C	P53222	116 aa		5.4	□□□□□ -1.54
TPM1	YNL079C	BIO5	P53744	561 aa	Known RBP	5.4	□□□□□ -1.54
TPM1	YNL079C	ALD3	P54114	506 aa		5.4	□□□□□ -1.54
TPM1	YNL079C	OYE2	Q03558	400 aa	Known RBP	5.4	□□□□□ -1.54
TPM1	YNL079C	REV3	P14284	1504 aa		5.39	□□□□□ -1.55
TPM1	YNL079C	KOG1	P38873	1557 aa		5.39	□□□□□ -1.55
TPM1	YNL079C	MET1	P36150	593 aa		5.39	□□□□□ -1.55
TPM1	YNL079C	FYV10	P40492	516 aa		5.39	□□□□□ -1.55
TPM1	YNL079C	GLO4	Q12320	285 aa		5.39	□□□□□ -1.55
TPM1	YNL079C	HXK1	P04806	485 aa	Known RBP	5.38	□□□□□ -1.55
TPM1	YNL079C	MCM2	P29469	868 aa		5.38	□□□□□ -1.55
TPM1	YNL079C	PRP40	P33203	583 aa	Known RBP	5.38	□□□□□ -1.55
TPM1	YNL079C	TFA2	P36145	328 aa		5.38	□□□□□ -1.55
TPM1	YNL079C	RIM11	P38615	370 aa		5.38	□□□□□ -1.55
TPM1	YNL079C	RVS167	P39743	482 aa	Known RBP	5.38	□□□□□ -1.55
TPM1	YNL079C	SAP155	P43612	1002 aa		5.38	□□□□□ -1.55
TPM1	YNL079C	DAL4	Q04895	635 aa		5.38	□□□□□ -1.55
TPM1	YNL079C	HVG1	P0CE11	249 aa		5.37	□□□□□ -1.55
TPM1	YNL079C	PAM1	P37304	830 aa	Known RBP	5.37	□□□□□ -1.55
TPM1	YNL079C	AMN1	P38285	549 aa	Predicted RBP	5.37	□□□□□ -1.55
TPM1	YNL079C	FAA3	P39002	694 aa		5.37	□□□□□ -1.55
TPM1	YNL079C	MON1	P53129	644 aa		5.37	□□□□□ -1.55
TPM1	YNL079C	YGR122W	P53272	402 aa		5.37	□□□□□ -1.55
TPM1	YNL079C	SPR28	Q04921	423 aa		5.37	□□□□□ -1.55
TPM1	YNL079C	SOG2	Q08817	791 aa		5.37	□□□□□ -1.55
TPM1	YNL079C	CMR1	Q12510	522 aa	Known RBP	5.37	□□□□□ -1.55
TPM1	YNL079C	SIN3	P22579	1536 aa		5.37	□□□□□ -1.55
TPM1	YNL079C	PRP5	P21372	849 aa	Predicted RBP	5.36	□□□□□ -1.55
TPM1	YNL079C	NPR1	P22211	790 aa		5.36	□□□□□ -1.55
TPM1	YNL079C	RPS26A	P39938	119 aa	Known RBP	5.36	□□□□□ -1.55
TPM1	YNL079C	RPS26B	P39939	119 aa	Known RBP	5.36	□□□□□ -1.55
TPM1	YNL079C	YJR124C	P47159	448 aa		5.36	□□□□□ -1.55
TPM1	YNL079C	YNR065C	P53751	1116 aa		5.36	□□□□□ -1.55
TPM1	YNL079C	YPL062W	Q02781	134 aa		5.36	□□□□□ -1.55
TPM1	YNL079C	PMT7	Q06644	662 aa		5.36	□□□□□ -1.55
TPM1	YNL079C	CYC8	P14922	966 aa		5.35	□□□□□ -1.55
TPM1	YNL079C	KAR2	P16474	682 aa	Known RBP	5.35	□□□□□ -1.55
TPM1	YNL079C	NAR1	P23503	491 aa	Known RBP	5.35	□□□□□ -1.55
TPM1	YNL079C	UGA4	P32837	571 aa		5.35	□□□□□ -1.55
TPM1	YNL079C	GUP1	P53154	560 aa		5.35	□□□□□ -1.55
TPM1	YNL079C	YAF9	P53930	226 aa		5.35	□□□□□ -1.55
TPM1	YNL079C	THO2	P53552	1597 aa	Known RBP	5.34	□□□□□ -1.55
TPM1	YNL079C	RAD2	P07276	1031 aa		5.34	□□□□□ -1.55
TPM1	YNL079C	MCM5	P29496	775 aa	Known RBP	5.34	□□□□□ -1.55
TPM1	YNL079C	LSB6	P42951	607 aa		5.34	□□□□□ -1.55
TPM1	YNL079C	SOK2	P53438	785 aa	Predicted RBP	5.34	□□□□□ -1.55
TPM1	YNL079C	ULP1	Q02724	621 aa		5.34	□□□□□ -1.55
TPM1	YNL079C	GIS4	Q04233	774 aa		5.34	□□□□□ -1.55
TPM1	YNL079C	TRK2	P28584	889 aa		5.33	□□□□□ -1.56
TPM1	YNL079C	PGM2	P37012	569 aa	Known RBP	5.33	□□□□□ -1.56
TPM1	YNL079C	ALG14	P38242	237 aa		5.33	□□□□□ -1.56
TPM1	YNL079C	GIP2	P40036	548 aa		5.33	□□□□□ -1.56
TPM1	YNL079C	NOP7	P53261	605 aa	Known RBP	5.33	□□□□□ -1.56
TPM1	YNL079C	YPL109C	Q02981	657 aa		5.33	□□□□□ -1.56
TPM1	YNL079C	RMD1	Q03441	430 aa		5.33	□□□□□ -1.56
TPM1	YNL079C	SSK2	P53599	1579 aa		5.33	□□□□□ -1.56
TPM1	YNL079C	FET4	P40988	552 aa		5.32	□□□□□ -1.56
TPM1	YNL079C	LEM3	P42838	414 aa		5.32	□□□□□ -1.56
TPM1	YNL079C	MRPS18	P42847	217 aa		5.32	□□□□□ -1.56
TPM1	YNL079C	ADI1	Q03677	179 aa		5.32	□□□□□ -1.56
TPM1	YNL079C	SVF1	Q05515	481 aa		5.32	□□□□□ -1.56
TPM1	YNL079C	SLP1	Q12232	587 aa		5.32	□□□□□ -1.56
TPM1	YNL079C	PRE9	P23638	258 aa	Known RBP	5.31	□□□□□ -1.56
TPM1	YNL079C	PEP7	P32609	515 aa		5.31	□□□□□ -1.56
TPM1	YNL079C	NOG1	Q02892	647 aa	Known RBP	5.31	□□□□□ -1.56
TPM1	YNL079C	HAS1	Q03532	505 aa	Known RBP	5.31	□□□□□ -1.56
TPM1	YNL079C	ESF1	Q06344	628 aa	Known RBP	5.31	□□□□□ -1.56
TPM1	YNL079C	MCD1	Q12158	566 aa		5.31	□□□□□ -1.56
TPM1	YNL079C	BUD4	P47136	1447 aa		5.31	□□□□□ -1.56
TPM1	YNL079C	AI1	P03875	834 aa		5.3	□□□□□ -1.56
TPM1	YNL079C	HTS1	P07263	546 aa	Known RBP	5.3	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms