RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeast

Gene SSN8, Length 972 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSN8	YNL025C	FIR1	P40020	876 aa		4.24	□□□□□ -1.73
SSN8	YNL025C	INP51	P40559	946 aa	Known RBP	4.24	□□□□□ -1.73
SSN8	YNL025C	HXT8	P40886	569 aa		4.24	□□□□□ -1.73
SSN8	YNL025C	PPT1	P53043	513 aa		4.24	□□□□□ -1.73
SSN8	YNL025C	SOG2	Q08817	791 aa		4.24	□□□□□ -1.73
SSN8	YNL025C	APC11	Q12157	165 aa		4.24	□□□□□ -1.73
SSN8	YNL025C	YLR122C	Q12312	125 aa		4.24	□□□□□ -1.73
SSN8	YNL025C	TY1A-NL1	Q12391	440 aa	Known RBP	4.24	□□□□□ -1.73
SSN8	YNL025C	SSA1	P10591	642 aa	Known RBP	4.23	□□□□□ -1.73
SSN8	YNL025C	TED1	P40533	473 aa		4.23	□□□□□ -1.73
SSN8	YNL025C	CTH1	P47976	325 aa		4.23	□□□□□ -1.73
SSN8	YNL025C	SOK2	P53438	785 aa	Predicted RBP	4.23	□□□□□ -1.73
SSN8	YNL025C	BIO5	P53744	561 aa	Known RBP	4.23	□□□□□ -1.73
SSN8	YNL025C	EMG1	Q06287	252 aa	Known RBP	4.23	□□□□□ -1.73
SSN8	YNL025C	BRE4	Q07660	1125 aa		4.23	□□□□□ -1.73
SSN8	YNL025C	RRN6	P32786	894 aa		4.22	□□□□□ -1.73
SSN8	YNL025C	GEF1	P37020	779 aa		4.22	□□□□□ -1.73
SSN8	YNL025C	SAF1	P38352	637 aa		4.22	□□□□□ -1.73
SSN8	YNL025C	NTA1	P40354	457 aa		4.22	□□□□□ -1.73
SSN8	YNL025C	SNU71	P53207	620 aa	Known RBP	4.22	□□□□□ -1.73
SSN8	YNL025C	FUS1	P11710	512 aa		4.21	□□□□□ -1.74
SSN8	YNL025C	AIM46	P38885	310 aa		4.21	□□□□□ -1.74
SSN8	YNL025C	NOB1	Q08444	459 aa	Known RBP	4.21	□□□□□ -1.74
SSN8	YNL025C	LSO1	Q3E827	93 aa		4.21	□□□□□ -1.74
SSN8	YNL025C	RGD2	P43556	714 aa		4.2	□□□□□ -1.74
SSN8	YNL025C	PNP1	Q05788	311 aa		4.2	□□□□□ -1.74
SSN8	YNL025C	CHS2	P14180	963 aa		4.19	□□□□□ -1.74
SSN8	YNL025C	SMC1	P32908	1225 aa		4.19	□□□□□ -1.74
SSN8	YNL025C	KTR2	P33550	425 aa		4.19	□□□□□ -1.74
SSN8	YNL025C	PAN5	P38787	379 aa		4.19	□□□□□ -1.74
SSN8	YNL025C	MET10	P39692	1035 aa		4.19	□□□□□ -1.74
SSN8	YNL025C	POL5	P39985	1022 aa	Known RBP	4.19	□□□□□ -1.74
SSN8	YNL025C	YJL181W	P46987	611 aa		4.19	□□□□□ -1.74
SSN8	YNL025C	ALD3	P54114	506 aa		4.19	□□□□□ -1.74
SSN8	YNL025C	REC8	Q12188	680 aa		4.19	□□□□□ -1.74
SSN8	YNL025C	TFA2	P36145	328 aa		4.18	□□□□□ -1.74
SSN8	YNL025C	YGR130C	P53278	816 aa		4.18	□□□□□ -1.74
SSN8	YNL025C	GIS1	Q03833	894 aa		4.18	□□□□□ -1.74
SSN8	YNL025C	SPO71	Q03868	1245 aa		4.18	□□□□□ -1.74
SSN8	YNL025C	YML083C	Q04526	418 aa		4.18	□□□□□ -1.74
SSN8	YNL025C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	RIP-Chip
SSN8	YNL025C	HVG1	P0CE11	249 aa		4.17	□□□□□ -1.74
SSN8	YNL025C	MAE1	P36013	669 aa	Known RBP	4.17	□□□□□ -1.74
SSN8	YNL025C	IRS4	P36115	615 aa	Known RBP	4.17	□□□□□ -1.74
SSN8	YNL025C	MAG2	Q06436	670 aa	Known RBP	4.17	□□□□□ -1.74
SSN8	YNL025C	MSB1	P21339	1137 aa	Known RBP	4.16	□□□□□ -1.74
SSN8	YNL025C	RNQ1	P25367	405 aa		4.16	□□□□□ -1.74
SSN8	YNL025C	BOI1	P38041	980 aa	Known RBP	4.16	□□□□□ -1.74
SSN8	YNL025C	RAD55	P38953	406 aa		4.16	□□□□□ -1.74
SSN8	YNL025C	SPO74	P45819	413 aa		4.16	□□□□□ -1.74
SSN8	YNL025C	NCE103	P53615	221 aa		4.16	□□□□□ -1.74
SSN8	YNL025C	YKL222C	P35995	705 aa		4.15	□□□□□ -1.75
SSN8	YNL025C	PSY2	P40164	858 aa		4.15	□□□□□ -1.75
SSN8	YNL025C	SUT1	P53032	299 aa	Known RBP	4.15	□□□□□ -1.75
SSN8	YNL025C	YNR065C	P53751	1116 aa		4.15	□□□□□ -1.75
SSN8	YNL025C	SUB1	P54000	292 aa	Known RBP	4.15	□□□□□ -1.75
SSN8	YNL025C	ELG1	Q12050	791 aa		4.15	□□□□□ -1.75
SSN8	YNL025C	TIF6	Q12522	245 aa	Known RBP	4.15	□□□□□ -1.75
SSN8	YNL025C	FUR4	P05316	633 aa	Known RBP	4.14	□□□□□ -1.75
SSN8	YNL025C	YCR015C	P25616	317 aa		4.14	□□□□□ -1.75
SSN8	YNL025C	BRN1	P38170	754 aa		4.14	□□□□□ -1.75
SSN8	YNL025C	AKR1	P39010	764 aa		4.14	□□□□□ -1.75
SSN8	YNL025C	SUB2	Q07478	446 aa	Known RBP	4.14	□□□□□ -1.75
SSN8	YNL025C	GLO4	Q12320	285 aa		4.14	□□□□□ -1.75
SSN8	YNL025C	CYC7	P00045	113 aa		4.13	□□□□□ -1.75
SSN8	YNL025C	NAM7	P30771	971 aa	Known RBP	4.13	□□□□□ -1.75
SSN8	YNL025C	ASF1	P32447	279 aa		4.13	□□□□□ -1.75
SSN8	YNL025C	YJR124C	P47159	448 aa		4.13	□□□□□ -1.75
SSN8	YNL025C	FAR11	P53917	953 aa		4.13	□□□□□ -1.75
SSN8	YNL025C	RPB10	P22139	70 aa		4.12	□□□□□ -1.75
SSN8	YNL025C	HEM3	P28789	327 aa		4.12	□□□□□ -1.75
SSN8	YNL025C	VPS72	Q03388	795 aa		4.12	□□□□□ -1.75
SSN8	YNL025C	HAS1	Q03532	505 aa	Known RBP	4.12	□□□□□ -1.75
SSN8	YNL025C	PYC2	P32327	1180 aa	Known RBP	4.11	□□□□□ -1.75
SSN8	YNL025C	BOL3	P39724	118 aa		4.11	□□□□□ -1.75
SSN8	YNL025C	NUG1	P40010	520 aa	Known RBP	4.11	□□□□□ -1.75
SSN8	YNL025C	NEO1	P40527	1151 aa		4.11	□□□□□ -1.75
SSN8	YNL025C	FET4	P40988	552 aa		4.11	□□□□□ -1.75
SSN8	YNL025C	DOS2	P54858	310 aa		4.11	□□□□□ -1.75
SSN8	YNL025C	RSC4	Q02206	625 aa		4.11	□□□□□ -1.75
SSN8	YNL025C	GIC2	Q06648	383 aa		4.11	□□□□□ -1.75
SSN8	YNL025C	YLL054C	Q12244	843 aa		4.11	□□□□□ -1.75
SSN8	YNL025C	KIP3	P53086	805 aa	Known RBP	4.1	□□□□□ -1.75
SSN8	YNL025C	UFD2	P54860	961 aa		4.1	□□□□□ -1.75
SSN8	YNL025C	YOR223W	Q12015	292 aa		4.1	□□□□□ -1.75
SSN8	YNL025C	ERS1	P17261	260 aa		4.09	□□□□□ -1.75
SSN8	YNL025C	NIT1	P40447	199 aa		4.09	□□□□□ -1.75
SSN8	YNL025C	PRP5	P21372	849 aa	Predicted RBP	4.08	□□□□□ -1.76
SSN8	YNL025C	PAM1	P37304	830 aa	Known RBP	4.08	□□□□□ -1.76
SSN8	YNL025C	YTA7	P40340	1379 aa		4.08	□□□□□ -1.76
SSN8	YNL025C	GCV1	P48015	400 aa		4.08	□□□□□ -1.76
SSN8	YNL025C	RTS3	P53289	263 aa		4.08	□□□□□ -1.76
SSN8	YNL025C	RPL34A	P87262	121 aa	Predicted RBP	4.08	□□□□□ -1.76
SSN8	YNL025C	CTR9	P89105	1077 aa		4.08	□□□□□ -1.76
SSN8	YNL025C	YOR059C	Q08448	450 aa	Known RBP	4.08	□□□□□ -1.76
SSN8	YNL025C	SEG2	P34250	1132 aa		4.07	□□□□□ -1.76
SSN8	YNL025C	MNN4	P36044	1178 aa		4.07	□□□□□ -1.76
SSN8	YNL025C	RIM11	P38615	370 aa		4.07	□□□□□ -1.76
SSN8	YNL025C	ACF4	P47129	309 aa		4.07	□□□□□ -1.76
SSN8	YNL025C	YIG1	Q08956	461 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 67.8 ms