RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W CEF1Q03654 590 aaPredicted RBP8.14□□□□□ -1.11
CTF3YLR381W YLR257WQ06146 321 aaKnown RBP8.14□□□□□ -1.11
CTF3YLR381W VPS35P34110 944 aa8.14□□□□□ -1.11
CTF3YLR381W EFM2P38347 419 aa8.14□□□□□ -1.11
CTF3YLR381W HSM3P38348 480 aa8.14□□□□□ -1.11
CTF3YLR381W MSN5P52918 1224 aa8.14□□□□□ -1.11
CTF3YLR381W YML108WQ03759 105 aa8.14□□□□□ -1.11
CTF3YLR381W YKU80Q04437 629 aa8.14□□□□□ -1.11
CTF3YLR381W YMR111CQ04461 462 aaPredicted RBP8.14□□□□□ -1.11
CTF3YLR381W PRE10P21242 288 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11not detected
CTF3YLR381W SYG1P40528 902 aa8.13□□□□□ -1.11
CTF3YLR381W YIL001WP40560 513 aa8.13□□□□□ -1.11
CTF3YLR381W MRX12P47084 519 aa8.13□□□□□ -1.11
CTF3YLR381W SHE10P53075 577 aa8.13□□□□□ -1.11
CTF3YLR381W TPO2P53283 614 aa8.13□□□□□ -1.11
CTF3YLR381W HEH2Q03281 663 aa8.13□□□□□ -1.11
CTF3YLR381W RPO26P20435 155 aa8.13□□□□□ -1.11
CTF3YLR381W DPB3P27344 201 aa8.13□□□□□ -1.11
CTF3YLR381W SSZ1P38788 538 aaKnown RBP8.13□□□□□ -1.11
CTF3YLR381W SPC72P39723 622 aa8.13□□□□□ -1.11
CTF3YLR381W HOS2P53096 452 aaPredicted RBP8.13□□□□□ -1.11
CTF3YLR381W MAL13P53338 473 aa8.13□□□□□ -1.11
CTF3YLR381W VTC3Q02725 835 aa8.13□□□□□ -1.11
CTF3YLR381W VAM6Q07468 1049 aa8.13□□□□□ -1.11
CTF3YLR381W SDH5Q08230 162 aa8.13□□□□□ -1.11
CTF3YLR381W MAK21Q12176 1025 aaKnown RBP8.13□□□□□ -1.11
CTF3YLR381W KCC4P25389 1037 aa8.12□□□□□ -1.11
CTF3YLR381W ARB1P40024 610 aaKnown RBP8.12□□□□□ -1.11
CTF3YLR381W AIM21P40563 679 aa8.12□□□□□ -1.11
CTF3YLR381W MAD1P40957 749 aa8.12□□□□□ -1.11
CTF3YLR381W LSC1P53598 329 aaKnown RBP8.12□□□□□ -1.11
CTF3YLR381W NKP2Q06162 153 aa8.12□□□□□ -1.11
CTF3YLR381W SFH1Q06168 426 aa8.12□□□□□ -1.11
CTF3YLR381W PET122P10355 254 aa8.11□□□□□ -1.11
CTF3YLR381W SPE2P21182 396 aa8.11□□□□□ -1.11
CTF3YLR381W SEG2P34250 1132 aa8.11□□□□□ -1.11
CTF3YLR381W PIH1P38768 344 aa8.11□□□□□ -1.11
CTF3YLR381W RPT2P40327 437 aaKnown RBP8.11□□□□□ -1.11
CTF3YLR381W ITT1Q04638 464 aa8.11□□□□□ -1.11
CTF3YLR381W YOR223WQ12015 292 aa8.11□□□□□ -1.11
CTF3YLR381W KRE5P22023 1365 aa8.11□□□□□ -1.11
CTF3YLR381W BNR1P40450 1375 aa8.11□□□□□ -1.11
CTF3YLR381W TYR1P20049 452 aa8.11□□□□□ -1.11
CTF3YLR381W DAL7P21826 554 aa8.11□□□□□ -1.11
CTF3YLR381W TBS1P38114 1094 aa8.11□□□□□ -1.11
CTF3YLR381W RTG3P38165 486 aa8.11□□□□□ -1.11
CTF3YLR381W MET18P40469 1032 aa8.11□□□□□ -1.11
CTF3YLR381W PLP1Q04004 230 aa8.11□□□□□ -1.11
CTF3YLR381W RIX7Q07844 837 aaKnown RBP8.11□□□□□ -1.11
CTF3YLR381W BUD7Q08754 746 aa8.11□□□□□ -1.11
CTF3YLR381W RTR1P40084 226 aaPredicted RBP8.1□□□□□ -1.11
CTF3YLR381W HEL2Q05580 639 aaKnown RBP8.1□□□□□ -1.11
CTF3YLR381W MPC54Q08550 464 aa8.1□□□□□ -1.11
CTF3YLR381W MCM16Q12262 181 aa8.1□□□□□ -1.11
CTF3YLR381W TRS33Q99394 268 aa8.1□□□□□ -1.11
CTF3YLR381W SIR4P11978 1358 aa8.1□□□□□ -1.11
CTF3YLR381W HXT13P39924 564 aa8.1□□□□□ -1.11
CTF3YLR381W POB3Q04636 552 aaKnown RBP8.1□□□□□ -1.11
CTF3YLR381W WHI5Q12416 295 aa8.1□□□□□ -1.11
CTF3YLR381W YBT1P32386 1661 aa8.09□□□□□ -1.11
CTF3YLR381W RPL17AP05740 184 aaKnown RBP8.09□□□□□ -1.11
CTF3YLR381W SEC23P15303 768 aaKnown RBP8.09□□□□□ -1.11
CTF3YLR381W REI1P38344 393 aaPredicted RBP8.09□□□□□ -1.11
CTF3YLR381W ETP1P38748 585 aaKnown RBP8.09□□□□□ -1.11
CTF3YLR381W VID27P40157 782 aa8.09□□□□□ -1.11
CTF3YLR381W YGL242CP53066 181 aa8.09□□□□□ -1.11
CTF3YLR381W FUS2Q05670 677 aa8.09□□□□□ -1.11
CTF3YLR381W ADE3P07245 946 aaKnown RBP8.09□□□□□ -1.12
CTF3YLR381W YMR085WP0CF18 432 aa8.09□□□□□ -1.12
CTF3YLR381W UBC1P21734 215 aaKnown RBP8.09□□□□□ -1.12
CTF3YLR381W YEL043WP32618 956 aa8.09□□□□□ -1.12
CTF3YLR381W ECM32P32644 1121 aaKnown RBP8.09□□□□□ -1.12
CTF3YLR381W TAF5P38129 798 aa8.09□□□□□ -1.12
CTF3YLR381W UBP13P38187 747 aa8.09□□□□□ -1.12
CTF3YLR381W DMA1P38823 416 aa8.09□□□□□ -1.12
CTF3YLR381W SDS3P40505 327 aa8.09□□□□□ -1.12
CTF3YLR381W HUL4P40985 892 aa8.09□□□□□ -1.12
CTF3YLR381W STB1P42845 420 aa8.09□□□□□ -1.12
CTF3YLR381W TRS85P46944 698 aa8.09□□□□□ -1.12
CTF3YLR381W YJR079WP47126 109 aa8.09□□□□□ -1.12
CTF3YLR381W BNI5P53890 448 aaKnown RBP8.09□□□□□ -1.12
CTF3YLR381W FAR11P53917 953 aa8.09□□□□□ -1.12
CTF3YLR381W RSM28Q03430 361 aa8.09□□□□□ -1.12
CTF3YLR381W YSP2Q06681 1438 aa8.08□□□□□ -1.12
CTF3YLR381W CDC31P06704 161 aaKnown RBP8.08□□□□□ -1.12
CTF3YLR381W PET494P07390 489 aaPredicted RBP8.08□□□□□ -1.12
CTF3YLR381W HMG1P12683 1054 aa8.08□□□□□ -1.12
CTF3YLR381W SSA4P22202 642 aaKnown RBP8.08□□□□□ -1.12
CTF3YLR381W SEC15P22224 910 aa8.08□□□□□ -1.12
CTF3YLR381W HSP78P33416 811 aa8.08□□□□□ -1.12
CTF3YLR381W COY1P34237 679 aa8.08□□□□□ -1.12
CTF3YLR381W NUP120P35729 1037 aa8.08□□□□□ -1.12
CTF3YLR381W AMN1P38285 549 aaPredicted RBP8.08□□□□□ -1.12
CTF3YLR381W PPX1P38698 397 aa8.08□□□□□ -1.12
CTF3YLR381W RBL2P48606 106 aaKnown RBP8.08□□□□□ -1.12
CTF3YLR381W COP1P53622 1201 aaKnown RBP8.08□□□□□ -1.12
CTF3YLR381W RCM1P53972 490 aa8.08□□□□□ -1.12
CTF3YLR381W CDC25P04821 1589 aa8.08□□□□□ -1.12
CTF3YLR381W ADH4P10127 382 aa8.07□□□□□ -1.12
CTF3YLR381W MSM1P22438 575 aa8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 128.2 ms