RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	ULI1	P43604	169 aa		6.65	□□□□□ -1.34
DBP9	YLR276C	YJR142W	P47173	342 aa		6.65	□□□□□ -1.34
DBP9	YLR276C	SAM37	P50110	327 aa		6.65	□□□□□ -1.34
DBP9	YLR276C	SUB1	P54000	292 aa	Known RBP	6.65	□□□□□ -1.34
DBP9	YLR276C	HXT5	P38695	592 aa		6.64	□□□□□ -1.35
DBP9	YLR276C	FAA3	P39002	694 aa		6.64	□□□□□ -1.35
DBP9	YLR276C	CWC24	P53769	259 aa		6.64	□□□□□ -1.35
DBP9	YLR276C	RLP24	Q07915	199 aa	Known RBP	6.64	□□□□□ -1.35
DBP9	YLR276C	KOG1	P38873	1557 aa		6.64	□□□□□ -1.35
DBP9	YLR276C	RSC4	Q02206	625 aa		6.64	□□□□□ -1.35
DBP9	YLR276C	ECM16	Q04217	1267 aa	Known RBP	6.64	□□□□□ -1.35
DBP9	YLR276C	OXR1	Q08952	273 aa		6.64	□□□□□ -1.35
DBP9	YLR276C	SWR1	Q05471	1514 aa		6.63	□□□□□ -1.35
DBP9	YLR276C	MET6	P05694	767 aa	Known RBP	6.63	□□□□□ -1.35
DBP9	YLR276C	MOD5	P07884	428 aa		6.63	□□□□□ -1.35
DBP9	YLR276C	RRN7	P40992	514 aa		6.63	□□□□□ -1.35
DBP9	YLR276C	SUT1	P53032	299 aa	Known RBP	6.63	□□□□□ -1.35
DBP9	YLR276C	YGL081W	P53156	320 aa		6.63	□□□□□ -1.35
DBP9	YLR276C	HAP5	Q02516	242 aa		6.63	□□□□□ -1.35
DBP9	YLR276C	ELP4	Q02884	456 aa	Known RBP	6.63	□□□□□ -1.35
DBP9	YLR276C	NUP159	P40477	1460 aa		6.63	□□□□□ -1.35
DBP9	YLR276C	NUP82	P40368	713 aa		6.62	□□□□□ -1.35
DBP9	YLR276C	NNF2	P53253	936 aa		6.62	□□□□□ -1.35
DBP9	YLR276C	YGR161W-C	Q3E744	92 aa		6.62	□□□□□ -1.35
DBP9	YLR276C	MRPL33	P20084	86 aa		6.62	□□□□□ -1.35
DBP9	YLR276C	TIF11	P38912	153 aa	Known RBP	6.62	□□□□□ -1.35
DBP9	YLR276C	VNX1	P42839	908 aa		6.62	□□□□□ -1.35
DBP9	YLR276C	FAA4	P47912	694 aa	Known RBP	6.62	□□□□□ -1.35
DBP9	YLR276C	NOC3	Q07896	663 aa	Predicted RBP	6.62	□□□□□ -1.35
DBP9	YLR276C	RVB2	Q12464	471 aa	Known RBP	6.62	□□□□□ -1.35
DBP9	YLR276C	GEA1	P47102	1408 aa	Predicted RBP	6.61	□□□□□ -1.35
DBP9	YLR276C	SNQ2	P32568	1501 aa	Known RBP	6.61	□□□□□ -1.35
DBP9	YLR276C	ESP1	Q03018	1630 aa		6.61	□□□□□ -1.35
DBP9	YLR276C	LTV1	P34078	463 aa		6.61	□□□□□ -1.35
DBP9	YLR276C	CIC1	P38779	376 aa	Known RBP	6.61	□□□□□ -1.35
DBP9	YLR276C	UBP12	P39538	1254 aa		6.61	□□□□□ -1.35
DBP9	YLR276C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	6.61	□□□□□ -1.35	not detected
DBP9	YLR276C	GDE1	Q02979	1223 aa		6.61	□□□□□ -1.35
DBP9	YLR276C	CDC34	P14682	295 aa		6.6	□□□□□ -1.35
DBP9	YLR276C	DUT1	P33317	147 aa		6.6	□□□□□ -1.35
DBP9	YLR276C	YHR020W	P38708	688 aa	Known RBP	6.6	□□□□□ -1.35
DBP9	YLR276C	CIN4	P39110	191 aa		6.6	□□□□□ -1.35
DBP9	YLR276C	CHZ1	P40019	153 aa	Predicted RBP	6.6	□□□□□ -1.35
DBP9	YLR276C	YGR053C	P53234	283 aa		6.6	□□□□□ -1.35
DBP9	YLR276C	RPN7	Q06103	429 aa	Known RBP	6.6	□□□□□ -1.35
DBP9	YLR276C	YBL029C-A	Q3E756	94 aa		6.6	□□□□□ -1.35
DBP9	YLR276C	PRT1	P06103	763 aa	Known RBP	6.59	□□□□□ -1.35
DBP9	YLR276C	RAD4	P14736	754 aa		6.59	□□□□□ -1.35
DBP9	YLR276C	SRP54	P20424	541 aa	Known RBP	6.59	□□□□□ -1.35
DBP9	YLR276C	TIM23	P32897	222 aa		6.59	□□□□□ -1.35
DBP9	YLR276C	SAP190	P36123	1033 aa		6.59	□□□□□ -1.35
DBP9	YLR276C	TPM2	P40414	161 aa		6.59	□□□□□ -1.35
DBP9	YLR276C	TPO2	P53283	614 aa		6.59	□□□□□ -1.35
DBP9	YLR276C	VPS72	Q03388	795 aa		6.59	□□□□□ -1.35
DBP9	YLR276C	BSC2	Q05611	235 aa		6.59	□□□□□ -1.35
DBP9	YLR276C	NOP14	Q99207	810 aa	Known RBP	6.59	□□□□□ -1.35
DBP9	YLR276C	ESC1	Q03661	1658 aa	Known RBP	6.59	□□□□□ -1.35
DBP9	YLR276C	UTR2	P32623	467 aa		6.59	□□□□□ -1.35
DBP9	YLR276C	SEC61	P32915	480 aa		6.59	□□□□□ -1.35
DBP9	YLR276C	SPF1	P39986	1215 aa	Known RBP	6.59	□□□□□ -1.35
DBP9	YLR276C	EMW1	P42842	904 aa	Known RBP	6.59	□□□□□ -1.35
DBP9	YLR276C	TAN1	P53072	289 aa	Predicted RBP	6.59	□□□□□ -1.35
DBP9	YLR276C	ISU1	Q03020	165 aa		6.59	□□□□□ -1.35
DBP9	YLR276C	UTP14	Q04500	899 aa	Known RBP	6.59	□□□□□ -1.35
DBP9	YLR276C	NUP157	P40064	1391 aa	Known RBP	6.58	□□□□□ -1.36
DBP9	YLR276C	PRE9	P23638	258 aa	Known RBP	6.58	□□□□□ -1.36
DBP9	YLR276C	SMC1	P32908	1225 aa		6.58	□□□□□ -1.36
DBP9	YLR276C	ARH1	P48360	493 aa		6.58	□□□□□ -1.36
DBP9	YLR276C	YDR344C	Q05510	147 aa		6.58	□□□□□ -1.36
DBP9	YLR276C	YPQ2	Q06328	317 aa		6.58	□□□□□ -1.36
DBP9	YLR276C	CDC45	Q08032	650 aa		6.58	□□□□□ -1.36
DBP9	YLR276C	OPI10	Q08202	246 aa		6.58	□□□□□ -1.36
DBP9	YLR276C	YOL057W	Q08225	711 aa		6.58	□□□□□ -1.36
DBP9	YLR276C	BUD21	Q08492	214 aa	Predicted RBP	6.58	□□□□□ -1.36
DBP9	YLR276C	YPR015C	Q12531	247 aa		6.58	□□□□□ -1.36
DBP9	YLR276C	YKL069W	P36088	180 aa		6.57	□□□□□ -1.36
DBP9	YLR276C	HXT8	P40886	569 aa		6.57	□□□□□ -1.36
DBP9	YLR276C	LSP1	Q12230	341 aa	Known RBP	6.57	□□□□□ -1.36
DBP9	YLR276C	PDR5	P33302	1511 aa	Known RBP	6.57	□□□□□ -1.36
DBP9	YLR276C	PHO8	P11491	566 aa		6.57	□□□□□ -1.36
DBP9	YLR276C	PRI2	P20457	528 aa		6.57	□□□□□ -1.36
DBP9	YLR276C	PAT1	P25644	796 aa	Known RBP	6.57	□□□□□ -1.36
DBP9	YLR276C	YHL008C	P38750	627 aa		6.57	□□□□□ -1.36
DBP9	YLR276C	PMC1	P38929	1173 aa	Predicted RBP	6.57	□□□□□ -1.36
DBP9	YLR276C	NAN1	Q02931	896 aa	Known RBP	6.57	□□□□□ -1.36
DBP9	YLR276C	VPS60	Q03390	229 aa		6.57	□□□□□ -1.36
DBP9	YLR276C	TDA5	Q06417	326 aa	Known RBP	6.57	□□□□□ -1.36
DBP9	YLR276C	MCD1	Q12158	566 aa		6.57	□□□□□ -1.36
DBP9	YLR276C	CLB1	P24868	471 aa		6.56	□□□□□ -1.36
DBP9	YLR276C	DEP1	P31385	405 aa		6.56	□□□□□ -1.36
DBP9	YLR276C	RTG1	P32607	177 aa		6.56	□□□□□ -1.36
DBP9	YLR276C	MRPS18	P42847	217 aa		6.56	□□□□□ -1.36
DBP9	YLR276C	RSC1	P53236	928 aa		6.56	□□□□□ -1.36
DBP9	YLR276C	BNI4	P53858	892 aa		6.56	□□□□□ -1.36
DBP9	YLR276C	DAL4	Q04895	635 aa		6.56	□□□□□ -1.36
DBP9	YLR276C	YOR1	P53049	1477 aa		6.56	□□□□□ -1.36
DBP9	YLR276C	MCM1	P11746	286 aa		6.55	□□□□□ -1.36
DBP9	YLR276C	VMA3	P25515	160 aa		6.55	□□□□□ -1.36
DBP9	YLR276C	VPS27	P40343	622 aa	Known RBP	6.55	□□□□□ -1.36
DBP9	YLR276C	TIM54	P47045	478 aa		6.55	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 516.4 ms