RNA–Protein interactions for RNA: YLR178C

TFS1, Transcript of Inhibitor of carboxypeptidase Y (Prc1p), and Ras GAP (Ira2p), yeastyeast

Gene TFS1, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFS1YLR178C SWI1P09547 1314 aa6.74□□□□□ -1.33
TFS1YLR178C SSK22P25390 1331 aaPredicted RBP6.74□□□□□ -1.33
TFS1YLR178C TY1A-DR4O74302 440 aa6.73□□□□□ -1.33
TFS1YLR178C TY1A-HP0C2I4 478 aaKnown RBP6.73□□□□□ -1.33
TFS1YLR178C TY1A-AP0CX57 440 aa6.73□□□□□ -1.33
TFS1YLR178C TY1A-PR1P0CX58 440 aa6.73□□□□□ -1.33
TFS1YLR178C TY1A-ORP0CX59 440 aa6.73□□□□□ -1.33
TFS1YLR178C TY1A-PR2P0CX60 440 aa6.73□□□□□ -1.33
TFS1YLR178C TY1A-DR5P0CX65 440 aa6.73□□□□□ -1.33
TFS1YLR178C TY1A-ER2P0CX66 440 aa6.73□□□□□ -1.33
TFS1YLR178C TY1A-GR3P0CX67 440 aa6.73□□□□□ -1.33
TFS1YLR178C TY1A-LR1P0CX68 440 aa6.73□□□□□ -1.33
TFS1YLR178C TY1A-MR2P0CX69 440 aa6.73□□□□□ -1.33
TFS1YLR178C RAM1P22007 431 aa6.73□□□□□ -1.33
TFS1YLR178C FRD1P32614 470 aaKnown RBP6.73□□□□□ -1.33
TFS1YLR178C TY1A-JR2P47099 440 aa6.73□□□□□ -1.33
TFS1YLR178C YRB30P53107 440 aaPredicted RBP6.73□□□□□ -1.33
TFS1YLR178C BNI4P53858 892 aa6.73□□□□□ -1.33
TFS1YLR178C KIN4Q01919 800 aa6.73□□□□□ -1.33
TFS1YLR178C TY1A-DR1Q03856 440 aa6.73□□□□□ -1.33
TFS1YLR178C TY1A-ML1Q04706 440 aaKnown RBP6.73□□□□□ -1.33
TFS1YLR178C BUD20Q08004 166 aaPredicted RBP6.73□□□□□ -1.33
TFS1YLR178C TY1A-BRQ12217 440 aa6.73□□□□□ -1.33
TFS1YLR178C GRX6Q12438 231 aa6.73□□□□□ -1.33
TFS1YLR178C RVB2Q12464 471 aaKnown RBP6.73□□□□□ -1.33
TFS1YLR178C TY1A-NL2Q12470 440 aa6.73□□□□□ -1.33
TFS1YLR178C TY1A-GR2Q12485 440 aa6.73□□□□□ -1.33
TFS1YLR178C SUP35P05453 685 aaKnown RBP6.72□□□□□ -1.33
TFS1YLR178C ICL1P28240 557 aaPredicted RBP6.72□□□□□ -1.33
TFS1YLR178C SIS2P36024 562 aa6.72□□□□□ -1.33
TFS1YLR178C YPP1P46951 817 aa6.72□□□□□ -1.33
TFS1YLR178C SYF1Q04048 859 aaPredicted RBP6.72□□□□□ -1.33
TFS1YLR178C YDR306CQ06640 478 aa6.72□□□□□ -1.33
TFS1YLR178C YDL206WQ12424 762 aa6.72□□□□□ -1.33
TFS1YLR178C RPS9BP05755 195 aaKnown RBP6.71□□□□□ -1.34
TFS1YLR178C PUP1P25043 261 aa6.71□□□□□ -1.34
TFS1YLR178C YKU70P32807 602 aa6.71□□□□□ -1.34
TFS1YLR178C ELP4Q02884 456 aaKnown RBP6.71□□□□□ -1.34
TFS1YLR178C FCP1Q03254 732 aa6.71□□□□□ -1.34
TFS1YLR178C PSH1Q12161 406 aa6.71□□□□□ -1.34
TFS1YLR178C PMD1P32634 1753 aa6.7□□□□□ -1.34
TFS1YLR178C RAD2P07276 1031 aa6.7□□□□□ -1.34
TFS1YLR178C DAL5P15365 543 aa6.7□□□□□ -1.34
TFS1YLR178C ITC1P53125 1264 aa6.7□□□□□ -1.34
TFS1YLR178C YGR122WP53272 402 aa6.7□□□□□ -1.34
TFS1YLR178C MCM16Q12262 181 aa6.7□□□□□ -1.34
TFS1YLR178C SWC3P31376 625 aa6.69□□□□□ -1.34
TFS1YLR178C RAD24P32641 659 aa6.69□□□□□ -1.34
TFS1YLR178C PEP12P32854 288 aa6.69□□□□□ -1.34
TFS1YLR178C SPT23P35210 1082 aa6.69□□□□□ -1.34
TFS1YLR178C RPA14P50106 137 aa6.69□□□□□ -1.34
TFS1YLR178C RPL34AP87262 121 aaPredicted RBP6.69□□□□□ -1.34
TFS1YLR178C UBP16Q02863 499 aa6.69□□□□□ -1.34
TFS1YLR178C YML083CQ04526 418 aa6.69□□□□□ -1.34
TFS1YLR178C AIR2Q12476 344 aaKnown RBP6.69□□□□□ -1.34
TFS1YLR178C RDS2P19541 446 aaKnown RBP6.68□□□□□ -1.34
TFS1YLR178C TGL4P36165 910 aa6.68□□□□□ -1.34
TFS1YLR178C YJR008WP47085 338 aa6.68□□□□□ -1.34
TFS1YLR178C CSI1Q04368 295 aa6.68□□□□□ -1.34
TFS1YLR178C YPR097WQ06839 1073 aa6.68□□□□□ -1.34
TFS1YLR178C SNU66Q12420 587 aaPredicted RBP6.68□□□□□ -1.34
TFS1YLR178C DPH6Q12429 685 aa6.68□□□□□ -1.34
TFS1YLR178C YPR015CQ12531 247 aa6.68□□□□□ -1.34
TFS1YLR178C ISF1P32488 338 aa6.67□□□□□ -1.34
TFS1YLR178C SHC1P39000 512 aa6.67□□□□□ -1.34
TFS1YLR178C UBP12P39538 1254 aa6.67□□□□□ -1.34
TFS1YLR178C PTC2P39966 464 aaKnown RBP6.67□□□□□ -1.34
TFS1YLR178C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
TFS1YLR178C PRT1P06103 763 aaKnown RBP6.66□□□□□ -1.34
TFS1YLR178C MSM1P22438 575 aa6.66□□□□□ -1.34
TFS1YLR178C NGR1P32831 672 aaKnown RBP6.66□□□□□ -1.34
TFS1YLR178C PAC1P39946 494 aaKnown RBP6.66□□□□□ -1.34
TFS1YLR178C BOI2P39969 1040 aa6.66□□□□□ -1.34
TFS1YLR178C EMP47P43555 445 aa6.66□□□□□ -1.34
TFS1YLR178C UBX2Q04228 584 aa6.66□□□□□ -1.34
TFS1YLR178C ATG20Q07528 640 aa6.66□□□□□ -1.34
TFS1YLR178C ALR1Q08269 859 aa6.66□□□□□ -1.34
TFS1YLR178C PRS1P32895 427 aaKnown RBP6.65□□□□□ -1.34
TFS1YLR178C YIL092WP40497 633 aa6.65□□□□□ -1.34
TFS1YLR178C SEN54Q02825 467 aaPredicted RBP6.65□□□□□ -1.34
TFS1YLR178C SRC1Q03707 834 aa6.65□□□□□ -1.34
TFS1YLR178C MTC5Q03897 1148 aa6.65□□□□□ -1.34
TFS1YLR178C SAC3P46674 1301 aa6.65□□□□□ -1.35
TFS1YLR178C THS1P04801 734 aaKnown RBP6.64□□□□□ -1.35
TFS1YLR178C RPS19AP07280 144 aaKnown RBP6.64□□□□□ -1.35
TFS1YLR178C RPS19BP07281 144 aaPredicted RBP6.64□□□□□ -1.35
TFS1YLR178C TEC1P18412 486 aa6.64□□□□□ -1.35
TFS1YLR178C RET1P22276 1149 aaKnown RBP6.64□□□□□ -1.35
TFS1YLR178C CDC3P32457 520 aaKnown RBP6.64□□□□□ -1.35
TFS1YLR178C YNG2P38806 282 aaKnown RBP6.64□□□□□ -1.35
TFS1YLR178C FUN12P39730 1002 aaKnown RBP6.64□□□□□ -1.35
TFS1YLR178C FIG4P42837 879 aa6.64□□□□□ -1.35
TFS1YLR178C THI3Q07471 609 aa6.64□□□□□ -1.35
TFS1YLR178C PDC1P06169 563 aaKnown RBP6.63□□□□□ -1.35
TFS1YLR178C MGM1P32266 881 aa6.63□□□□□ -1.35
TFS1YLR178C ICP55P40051 511 aa6.63□□□□□ -1.35
TFS1YLR178C KTR7P40504 517 aa6.63□□□□□ -1.35
TFS1YLR178C RRN7P40992 514 aa6.63□□□□□ -1.35
TFS1YLR178C RPT4P53549 437 aaKnown RBP6.63□□□□□ -1.35
TFS1YLR178C YML082WQ04533 649 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms