RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C NHA1Q99271 985 aa6.63□□□□□ -1.35
SMD3YLR147C COBP00163 385 aa6.62□□□□□ -1.35
SMD3YLR147C FUS1P11710 512 aa6.62□□□□□ -1.35
SMD3YLR147C SOG2Q08817 791 aa6.62□□□□□ -1.35
SMD3YLR147C DUR3P33413 735 aa6.61□□□□□ -1.35
SMD3YLR147C PPX1P38698 397 aa6.61□□□□□ -1.35
SMD3YLR147C SOK2P53438 785 aaPredicted RBP6.61□□□□□ -1.35
SMD3YLR147C AMN1P38285 549 aaPredicted RBP6.6□□□□□ -1.35
SMD3YLR147C GLO4Q12320 285 aa6.6□□□□□ -1.35
SMD3YLR147C HVG1P0CE11 249 aa6.59□□□□□ -1.35
SMD3YLR147C IPL1P38991 367 aa6.59□□□□□ -1.35
SMD3YLR147C GIP2P40036 548 aa6.59□□□□□ -1.35
SMD3YLR147C BSC2Q05611 235 aa6.59□□□□□ -1.35
SMD3YLR147C SLP1Q12232 587 aa6.59□□□□□ -1.35
SMD3YLR147C FLP1P03870 423 aa6.58□□□□□ -1.36
SMD3YLR147C YCK2P23292 546 aaKnown RBP6.58□□□□□ -1.36
SMD3YLR147C MET4P32389 672 aa6.58□□□□□ -1.36
SMD3YLR147C GUP1P53154 560 aa6.58□□□□□ -1.36
SMD3YLR147C WHI5Q12416 295 aa6.58□□□□□ -1.36
SMD3YLR147C TY4B-PA0A0B7P3V8 1104 aa6.57□□□□□ -1.36
SMD3YLR147C TED1P40533 473 aa6.57□□□□□ -1.36
SMD3YLR147C YJR124CP47159 448 aa6.57□□□□□ -1.36
SMD3YLR147C PUS1Q12211 544 aaKnown RBP6.57□□□□□ -1.36
SMD3YLR147C TY4A-HQ6Q5P6 413 aa6.57□□□□□ -1.36
SMD3YLR147C PHO4P07270 312 aaKnown RBP6.56□□□□□ -1.36
SMD3YLR147C SEC20P28791 383 aa6.56□□□□□ -1.36
SMD3YLR147C RIM11P38615 370 aa6.56□□□□□ -1.36
SMD3YLR147C SKN7P38889 622 aa6.56□□□□□ -1.36
SMD3YLR147C YNR065CP53751 1116 aa6.56□□□□□ -1.36
SMD3YLR147C YMR187CQ03236 431 aa6.56□□□□□ -1.36
SMD3YLR147C MSH6Q03834 1242 aa6.56□□□□□ -1.36
SMD3YLR147C YDR215CQ12240 137 aa6.56□□□□□ -1.36
SMD3YLR147C YPR053CQ6Q5F3 151 aa6.56□□□□□ -1.36
SMD3YLR147C SLD2P34252 453 aa6.55□□□□□ -1.36
SMD3YLR147C YHL008CP38750 627 aa6.55□□□□□ -1.36
SMD3YLR147C SLN1P39928 1220 aaPredicted RBP6.55□□□□□ -1.36
SMD3YLR147C BUD9P53226 547 aa6.55□□□□□ -1.36
SMD3YLR147C INP54Q08227 384 aaKnown RBP6.55□□□□□ -1.36
SMD3YLR147C RRM3P38766 723 aa6.54□□□□□ -1.36
SMD3YLR147C LEM3P42838 414 aa6.54□□□□□ -1.36
SMD3YLR147C LSB6P42951 607 aa6.54□□□□□ -1.36
SMD3YLR147C SAM37P50110 327 aa6.54□□□□□ -1.36
SMD3YLR147C NOC3Q07896 663 aaPredicted RBP6.54□□□□□ -1.36
SMD3YLR147C CMR1Q12510 522 aaKnown RBP6.54□□□□□ -1.36
SMD3YLR147C PRP5P21372 849 aaPredicted RBP6.53□□□□□ -1.36
SMD3YLR147C ECM2P38241 364 aaKnown RBP6.53□□□□□ -1.36
SMD3YLR147C PAN5P38787 379 aa6.53□□□□□ -1.36
SMD3YLR147C SAP155P43612 1002 aa6.53□□□□□ -1.36
SMD3YLR147C PRY1P47032 299 aa6.53□□□□□ -1.36
SMD3YLR147C HAS1Q03532 505 aaKnown RBP6.53□□□□□ -1.36
SMD3YLR147C GAS5Q08193 484 aa6.53□□□□□ -1.36
SMD3YLR147C NPR1P22211 790 aa6.52□□□□□ -1.37
SMD3YLR147C THI12P42883 340 aa6.52□□□□□ -1.37
SMD3YLR147C THI5P43534 340 aa6.52□□□□□ -1.37
SMD3YLR147C THI11P47183 340 aa6.52□□□□□ -1.37
SMD3YLR147C NUT1P53114 1132 aa6.52□□□□□ -1.37
SMD3YLR147C MTC5Q03897 1148 aa6.52□□□□□ -1.37
SMD3YLR147C THI13Q07748 340 aa6.52□□□□□ -1.37
SMD3YLR147C VPS35P34110 944 aa6.51□□□□□ -1.37
SMD3YLR147C POL5P39985 1022 aaKnown RBP6.51□□□□□ -1.37
SMD3YLR147C NEO1P40527 1151 aa6.5□□□□□ -1.37
SMD3YLR147C FET4P40988 552 aa6.5□□□□□ -1.37
SMD3YLR147C DAK2P43550 591 aa6.5□□□□□ -1.37
SMD3YLR147C CCT8P47079 568 aaKnown RBP6.5□□□□□ -1.37
SMD3YLR147C AI3P03877 415 aa6.49□□□□□ -1.37
SMD3YLR147C CIC1P38779 376 aaKnown RBP6.49□□□□□ -1.37
SMD3YLR147C SPO71Q03868 1245 aa6.49□□□□□ -1.37
SMD3YLR147C YCS4Q06156 1176 aa6.49□□□□□ -1.37
SMD3YLR147C TOS4Q06266 489 aa6.49□□□□□ -1.37
SMD3YLR147C SAC7P17121 654 aa6.48□□□□□ -1.37
SMD3YLR147C GCD6P32501 712 aaKnown RBP6.48□□□□□ -1.37
SMD3YLR147C SFA1P32771 386 aa6.48□□□□□ -1.37
SMD3YLR147C MON1P53129 644 aa6.48□□□□□ -1.37
SMD3YLR147C DSE4P53753 1117 aa6.48□□□□□ -1.37
SMD3YLR147C TY1A-NL1Q12391 440 aaKnown RBP6.48□□□□□ -1.37
SMD3YLR147C LSB3P43603 459 aaKnown RBP6.47□□□□□ -1.37
SMD3YLR147C YAF9P53930 226 aa6.47□□□□□ -1.37
SMD3YLR147C PMT7Q06644 662 aa6.47□□□□□ -1.37
SMD3YLR147C MCA1Q08601 432 aa6.47□□□□□ -1.37
SMD3YLR147C HEM3P28789 327 aa6.46□□□□□ -1.38
SMD3YLR147C TAT1P38085 619 aa6.46□□□□□ -1.38
SMD3YLR147C RVS167P39743 482 aaKnown RBP6.46□□□□□ -1.38
SMD3YLR147C ELG1Q12050 791 aa6.46□□□□□ -1.38
SMD3YLR147C HTS1P07263 546 aaKnown RBP6.45□□□□□ -1.38
SMD3YLR147C ATE1P16639 503 aa6.45□□□□□ -1.38
SMD3YLR147C ERS1P17261 260 aa6.44□□□□□ -1.38
SMD3YLR147C MCM5P29496 775 aaKnown RBP6.44□□□□□ -1.38
SMD3YLR147C PRP40P33203 583 aaKnown RBP6.44□□□□□ -1.38
SMD3YLR147C MAE1P36013 669 aaKnown RBP6.44□□□□□ -1.38
SMD3YLR147C ARI1P53111 347 aaKnown RBP6.44□□□□□ -1.38
SMD3YLR147C RRP15Q06511 250 aaPredicted RBP6.44□□□□□ -1.38
SMD3YLR147C UGA4P32837 571 aa6.43□□□□□ -1.38
SMD3YLR147C RPT1P33299 467 aaKnown RBP6.43□□□□□ -1.38
SMD3YLR147C NCE103P53615 221 aa6.43□□□□□ -1.38
SMD3YLR147C YPL034WQ03083 165 aa6.43□□□□□ -1.38
SMD3YLR147C DAL4Q04895 635 aa6.43□□□□□ -1.38
SMD3YLR147C YIG1Q08956 461 aa6.43□□□□□ -1.38
SMD3YLR147C RSC6P25632 483 aa6.42□□□□□ -1.38
SMD3YLR147C POL32P47110 350 aa6.42□□□□□ -1.38
SMD3YLR147C OXR1Q08952 273 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms