RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W YBL113CQ7M4S9 792 aa2.19□□□□□ -2.06
SLX4YLR135W VAN1P23642 535 aa2.18□□□□□ -2.06
SLX4YLR135W PPX1P38698 397 aa2.18□□□□□ -2.06
SLX4YLR135W PNP1Q05788 311 aa2.18□□□□□ -2.06
SLX4YLR135W PDI1P17967 522 aaKnown RBP2.18□□□□□ -2.06
SLX4YLR135W ERP5P38819 212 aa2.18□□□□□ -2.06
SLX4YLR135W BOL3P39724 118 aa2.18□□□□□ -2.06
SLX4YLR135W ALD4P46367 519 aaKnown RBP2.18□□□□□ -2.06
SLX4YLR135W REC8Q12188 680 aa2.18□□□□□ -2.06
SLX4YLR135W FUR4P05316 633 aaKnown RBP2.17□□□□□ -2.06
SLX4YLR135W CYT1P07143 309 aa2.17□□□□□ -2.06
SLX4YLR135W RPS6AP0CX37 236 aaKnown RBP2.17□□□□□ -2.06
SLX4YLR135W RPS6BP0CX38 236 aaPredicted RBP2.17□□□□□ -2.06
SLX4YLR135W MDJ2P42834 146 aa2.17□□□□□ -2.06
SLX4YLR135W ACF4P47129 309 aa2.17□□□□□ -2.06
SLX4YLR135W SNU71P53207 620 aaKnown RBP2.17□□□□□ -2.06
SLX4YLR135W PUN1Q06991 263 aa2.17□□□□□ -2.06
SLX4YLR135W MSC6Q08818 692 aaKnown RBP2.17□□□□□ -2.06
SLX4YLR135W TY1A-NL1Q12391 440 aaKnown RBP2.17□□□□□ -2.06
SLX4YLR135W SWI5P08153 709 aa2.17□□□□□ -2.06
SLX4YLR135W MCM1P11746 286 aa2.17□□□□□ -2.06
SLX4YLR135W PRP6P19735 899 aaPredicted RBP2.17□□□□□ -2.06
SLX4YLR135W SUV3P32580 737 aa2.17□□□□□ -2.06
SLX4YLR135W NTH2P35172 780 aa2.17□□□□□ -2.06
SLX4YLR135W THI80P35202 319 aa2.17□□□□□ -2.06
SLX4YLR135W LSO1Q3E827 93 aa2.17□□□□□ -2.06
SLX4YLR135W YHL050CP38721 697 aa2.16□□□□□ -2.06
SLX4YLR135W YHR219WP38900 624 aa2.16□□□□□ -2.06
SLX4YLR135W IPL1P38991 367 aa2.16□□□□□ -2.06
SLX4YLR135W CWH41P53008 833 aa2.16□□□□□ -2.06
SLX4YLR135W YPQ2Q06328 317 aa2.16□□□□□ -2.06
SLX4YLR135W RRP15Q06511 250 aaPredicted RBP2.16□□□□□ -2.06
SLX4YLR135W APC11Q12157 165 aa2.16□□□□□ -2.06
SLX4YLR135W RRN6P32786 894 aa2.15□□□□□ -2.06
SLX4YLR135W PAM1P37304 830 aaKnown RBP2.15□□□□□ -2.06
SLX4YLR135W GRS1P38088 690 aaKnown RBP2.15□□□□□ -2.06
SLX4YLR135W QDR1P40475 563 aa2.15□□□□□ -2.06
SLX4YLR135W CAB1Q04430 367 aa2.15□□□□□ -2.06
SLX4YLR135W SCD5P34758 872 aa2.15□□□□□ -2.07
SLX4YLR135W NOP7P53261 605 aaKnown RBP2.15□□□□□ -2.07
SLX4YLR135W UTP4Q06679 776 aaKnown RBP2.15□□□□□ -2.07
SLX4YLR135W WHI5Q12416 295 aa2.15□□□□□ -2.07
SLX4YLR135W YBR197CP38306 217 aa2.14□□□□□ -2.07
SLX4YLR135W GLO3P38682 493 aaKnown RBP2.14□□□□□ -2.07
SLX4YLR135W HXT5P38695 592 aa2.14□□□□□ -2.07
SLX4YLR135W SVF1Q05515 481 aa2.14□□□□□ -2.07
SLX4YLR135W NUT2Q06213 157 aa2.14□□□□□ -2.07
SLX4YLR135W TY4B-PA0A0B7P3V8 1104 aa2.14□□□□□ -2.07
SLX4YLR135W BOI1P38041 980 aaKnown RBP2.14□□□□□ -2.07
SLX4YLR135W UFD2P54860 961 aa2.14□□□□□ -2.07
SLX4YLR135W TRS120Q04183 1289 aa2.14□□□□□ -2.07
SLX4YLR135W TY4A-HQ6Q5P6 413 aa2.14□□□□□ -2.07
SLX4YLR135W FRT1Q99332 602 aa2.14□□□□□ -2.07
SLX4YLR135W ISC10P32645 267 aa2.13□□□□□ -2.07
SLX4YLR135W KTR2P33550 425 aa2.13□□□□□ -2.07
SLX4YLR135W SEA4P38164 1038 aa2.13□□□□□ -2.07
SLX4YLR135W ORC1P54784 914 aaPredicted RBP2.13□□□□□ -2.07
SLX4YLR135W RPS31P05759 152 aaKnown RBP2.13□□□□□ -2.07
SLX4YLR135W MRPL33P20084 86 aa2.13□□□□□ -2.07
SLX4YLR135W MET4P32389 672 aa2.13□□□□□ -2.07
SLX4YLR135W POL32P47110 350 aa2.13□□□□□ -2.07
SLX4YLR135W YJR107WP47145 328 aa2.13□□□□□ -2.07
SLX4YLR135W ATE1P16639 503 aa2.12□□□□□ -2.07
SLX4YLR135W TSA1P34760 196 aaKnown RBP2.12□□□□□ -2.07
SLX4YLR135W ALD2P47771 506 aa2.12□□□□□ -2.07
SLX4YLR135W FOX2Q02207 900 aaKnown RBP2.12□□□□□ -2.07
SLX4YLR135W RPB10P22139 70 aa2.11□□□□□ -2.07
SLX4YLR135W MGE1P38523 228 aa2.11□□□□□ -2.07
SLX4YLR135W CDC55Q00362 526 aa2.11□□□□□ -2.07
SLX4YLR135W MNL2Q12205 849 aa2.11□□□□□ -2.07
SLX4YLR135W PHO4P07270 312 aaKnown RBP2.11□□□□□ -2.07
SLX4YLR135W NAP1P25293 417 aaKnown RBP2.11□□□□□ -2.07
SLX4YLR135W GCD6P32501 712 aaKnown RBP2.11□□□□□ -2.07
SLX4YLR135W SMC1P32908 1225 aa2.11□□□□□ -2.07
SLX4YLR135W GPI13Q07830 1017 aa2.11□□□□□ -2.07
SLX4YLR135W DYS1P38791 387 aa2.1□□□□□ -2.07
SLX4YLR135W TED1P40533 473 aa2.1□□□□□ -2.07
SLX4YLR135W AIM44Q99299 758 aa2.1□□□□□ -2.07
SLX4YLR135W RPC31P17890 251 aa2.1□□□□□ -2.07
SLX4YLR135W VMA3P25515 160 aa2.1□□□□□ -2.07
SLX4YLR135W MLF3P32047 452 aa2.1□□□□□ -2.07
SLX4YLR135W HSP78P33416 811 aa2.1□□□□□ -2.07
SLX4YLR135W MET10P39692 1035 aa2.1□□□□□ -2.07
SLX4YLR135W NTA1P40354 457 aa2.1□□□□□ -2.07
SLX4YLR135W HXT8P40886 569 aa2.1□□□□□ -2.07
SLX4YLR135W THI12P42883 340 aa2.1□□□□□ -2.07
SLX4YLR135W THI5P43534 340 aa2.1□□□□□ -2.07
SLX4YLR135W THI11P47183 340 aa2.1□□□□□ -2.07
SLX4YLR135W YNL165WP53891 406 aa2.1□□□□□ -2.07
SLX4YLR135W RSC4Q02206 625 aa2.1□□□□□ -2.07
SLX4YLR135W RMD1Q03441 430 aa2.1□□□□□ -2.07
SLX4YLR135W THI13Q07748 340 aa2.1□□□□□ -2.07
SLX4YLR135W GCD1P09032 578 aaPredicted RBP2.09□□□□□ -2.07
SLX4YLR135W VPS35P34110 944 aa2.09□□□□□ -2.07
SLX4YLR135W LDH1P38139 375 aa2.09□□□□□ -2.07
SLX4YLR135W DAK2P43550 591 aa2.09□□□□□ -2.07
SLX4YLR135W SAM37P50110 327 aa2.09□□□□□ -2.07
SLX4YLR135W RIM8P53179 542 aa2.09□□□□□ -2.07
SLX4YLR135W YNL011CP53980 444 aa2.09□□□□□ -2.07
SLX4YLR135W SEC8P32855 1065 aa2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms