RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	AIM46	P38885	310 aa		1.99	□□□□□ -2.09
SMC4	YLR086W	UTP7	P40055	554 aa	Known RBP	1.99	□□□□□ -2.09
SMC4	YLR086W	GUP1	P53154	560 aa		1.99	□□□□□ -2.09
SMC4	YLR086W	SLP1	Q12232	587 aa		1.99	□□□□□ -2.09
SMC4	YLR086W	YOL098C	Q12496	1037 aa		1.99	□□□□□ -2.09
SMC4	YLR086W	RAS1	P01119	309 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	BUD6	P41697	788 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	YJR115W	P47152	169 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	BIO5	P53744	561 aa	Known RBP	1.98	□□□□□ -2.09
SMC4	YLR086W	CUS1	Q02554	436 aa	Predicted RBP	1.98	□□□□□ -2.09
SMC4	YLR086W	YLR346C	Q06139	101 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	RTT10	Q08924	1013 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	SSF2	Q12153	453 aa	Predicted RBP	1.98	□□□□□ -2.09
SMC4	YLR086W	MSC7	P38694	644 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	OSH7	P38755	437 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	SHU2	P38957	223 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	ACO2	P39533	789 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	SUT1	P53032	299 aa	Known RBP	1.98	□□□□□ -2.09
SMC4	YLR086W	YAF9	P53930	226 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	FOX2	Q02207	900 aa	Known RBP	1.98	□□□□□ -2.09
SMC4	YLR086W	SHE9	Q04172	456 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	FUS1	P11710	512 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	STI1	P15705	589 aa	Known RBP RIP-Chip data	1.98	□□□□□ -2.09	not detected
SMC4	YLR086W	VMA4	P22203	233 aa	Known RBP	1.98	□□□□□ -2.09
SMC4	YLR086W	PYC2	P32327	1180 aa	Known RBP	1.98	□□□□□ -2.09
SMC4	YLR086W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	1.98	□□□□□ -2.09	not detected
SMC4	YLR086W	RRP14	P36080	434 aa	Known RBP	1.98	□□□□□ -2.09
SMC4	YLR086W	HXT13	P39924	564 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	CLA4	P48562	842 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	HXT17	P53631	564 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	SIW14	P53965	281 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	HXT15	P54854	567 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	TOS4	Q06266	489 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	GLO4	Q12320	285 aa		1.98	□□□□□ -2.09
SMC4	YLR086W	CMR1	Q12510	522 aa	Known RBP	1.98	□□□□□ -2.09
SMC4	YLR086W	DUR3	P33413	735 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	NCL1	P38205	684 aa	Known RBP	1.97	□□□□□ -2.09
SMC4	YLR086W	PIC2	P40035	300 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	LYS5	P50113	272 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	ULP1	Q02724	621 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	INP54	Q08227	384 aa	Known RBP	1.97	□□□□□ -2.09
SMC4	YLR086W	TY1A-BL	Q12266	440 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	DIT1	P21623	536 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	ALA1	P40825	983 aa	Known RBP	1.97	□□□□□ -2.09
SMC4	YLR086W	THI12	P42883	340 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	THI5	P43534	340 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	OSW7	P43611	510 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	THI11	P47183	340 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	YGL081W	P53156	320 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	KRE33	P53914	1056 aa	Known RBP	1.97	□□□□□ -2.09
SMC4	YLR086W	THI13	Q07748	340 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	IDI1	P15496	288 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	PET112	P33893	541 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	FAA3	P39002	694 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	ALD3	P54114	506 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	NSE3	Q05541	303 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	PPM2	Q08282	695 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	YIG1	Q08956	461 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	NPR1	P22211	790 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	AGP1	P25376	633 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	BSD2	P38356	321 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	RGA1	P39083	1007 aa		1.97	□□□□□ -2.09
SMC4	YLR086W	TRK1	P12685	1235 aa		1.96	□□□□□ -2.1
SMC4	YLR086W	RPS26A	P39938	119 aa	Known RBP	1.96	□□□□□ -2.1
SMC4	YLR086W	RPS26B	P39939	119 aa	Known RBP	1.96	□□□□□ -2.1
SMC4	YLR086W	INP51	P40559	946 aa	Known RBP	1.96	□□□□□ -2.1
SMC4	YLR086W	YGL140C	P53120	1219 aa		1.96	□□□□□ -2.1
SMC4	YLR086W	YNR040W	P53736	256 aa		1.96	□□□□□ -2.1
SMC4	YLR086W	TY1A-MR1	Q04215	440 aa		1.96	□□□□□ -2.1
SMC4	YLR086W	EXO5	P38289	585 aa		1.96	□□□□□ -2.1
SMC4	YLR086W	YHL008C	P38750	627 aa		1.96	□□□□□ -2.1
SMC4	YLR086W	AIR1	P40507	360 aa	Known RBP	1.96	□□□□□ -2.1
SMC4	YLR086W	SYT1	Q06836	1226 aa		1.96	□□□□□ -2.1
SMC4	YLR086W	TCB1	Q12466	1186 aa		1.96	□□□□□ -2.1
SMC4	YLR086W	DPS1	P04802	557 aa	Known RBP	1.96	□□□□□ -2.1
SMC4	YLR086W	SBA1	P28707	216 aa	Known RBP	1.96	□□□□□ -2.1
SMC4	YLR086W	MCM2	P29469	868 aa		1.96	□□□□□ -2.1
SMC4	YLR086W	MCM5	P29496	775 aa	Known RBP	1.96	□□□□□ -2.1
SMC4	YLR086W	SPF1	P39986	1215 aa	Known RBP	1.96	□□□□□ -2.1
SMC4	YLR086W	CHZ1	P40019	153 aa	Predicted RBP	1.96	□□□□□ -2.1
SMC4	YLR086W	GCV1	P48015	400 aa		1.96	□□□□□ -2.1
SMC4	YLR086W	MTO1	P53070	669 aa		1.96	□□□□□ -2.1
SMC4	YLR086W	GCR2	Q01722	534 aa		1.96	□□□□□ -2.1
SMC4	YLR086W	UTP14	Q04500	899 aa	Known RBP	1.96	□□□□□ -2.1
SMC4	YLR086W	DAL4	Q04895	635 aa		1.96	□□□□□ -2.1
SMC4	YLR086W	CCP1	P00431	361 aa		1.95	□□□□□ -2.1
SMC4	YLR086W	HTS1	P07263	546 aa	Known RBP	1.95	□□□□□ -2.1
SMC4	YLR086W	FPR3	P38911	411 aa	Known RBP	1.95	□□□□□ -2.1
SMC4	YLR086W	NAM8	Q00539	523 aa	Known RBP	1.95	□□□□□ -2.1
SMC4	YLR086W	EEB1	Q02891	456 aa		1.95	□□□□□ -2.1
SMC4	YLR086W	LCB5	Q06147	687 aa	Known RBP	1.95	□□□□□ -2.1
SMC4	YLR086W	BDF2	Q07442	638 aa		1.95	□□□□□ -2.1
SMC4	YLR086W	KNS1	P32350	737 aa	Predicted RBP	1.95	□□□□□ -2.1
SMC4	YLR086W	SNF7	P39929	240 aa	Known RBP	1.95	□□□□□ -2.1
SMC4	YLR086W	IOC3	P43596	787 aa		1.95	□□□□□ -2.1
SMC4	YLR086W	SRC1	Q03707	834 aa		1.95	□□□□□ -2.1
SMC4	YLR086W	SPR28	Q04921	423 aa		1.95	□□□□□ -2.1
SMC4	YLR086W	OPT2	Q06593	877 aa		1.95	□□□□□ -2.1
SMC4	YLR086W	SRF1	Q12516	437 aa		1.95	□□□□□ -2.1
SMC4	YLR086W	HEM13	P11353	328 aa	Known RBP	1.95	□□□□□ -2.1

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms