RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C TIF6Q12522 245 aaKnown RBP6.15□□□□□ -1.42
BUD28YLR062C FLO1P32768 1537 aa6.15□□□□□ -1.43
BUD28YLR062C SNF3P10870 884 aa6.14□□□□□ -1.43
BUD28YLR062C DCW1P36091 449 aa6.14□□□□□ -1.43
BUD28YLR062C PIF1P07271 859 aa6.13□□□□□ -1.43
BUD28YLR062C GAL2P13181 574 aa6.13□□□□□ -1.43
BUD28YLR062C GUT1P32190 709 aa6.13□□□□□ -1.43
BUD28YLR062C PTK1P36002 662 aaPredicted RBP6.13□□□□□ -1.43
BUD28YLR062C VNX1P42839 908 aa6.13□□□□□ -1.43
BUD28YLR062C APL6P46682 809 aa6.13□□□□□ -1.43
BUD28YLR062C SPP1Q03012 353 aa6.13□□□□□ -1.43
BUD28YLR062C RRI2Q12348 645 aa6.13□□□□□ -1.43
BUD28YLR062C MOT2P34909 587 aaKnown RBP6.12□□□□□ -1.43
BUD28YLR062C KEL1P38853 1164 aaKnown RBP6.12□□□□□ -1.43
BUD28YLR062C HTA1P04911 132 aaKnown RBP6.11□□□□□ -1.43
BUD28YLR062C HTA2P04912 132 aa6.11□□□□□ -1.43
BUD28YLR062C RAD53P22216 821 aa6.11□□□□□ -1.43
BUD28YLR062C MDL2P33311 773 aa6.11□□□□□ -1.43
BUD28YLR062C EAP1P36041 632 aaKnown RBP6.11□□□□□ -1.43
BUD28YLR062C APE3P37302 537 aaKnown RBP6.11□□□□□ -1.43
BUD28YLR062C KTR3P38130 404 aaPredicted RBP6.11□□□□□ -1.43
BUD28YLR062C FUN12P39730 1002 aaKnown RBP6.11□□□□□ -1.43
BUD28YLR062C POL32P47110 350 aa6.11□□□□□ -1.43
BUD28YLR062C NSG2P53898 299 aa6.11□□□□□ -1.43
BUD28YLR062C PUF6Q04373 656 aaKnown RBP6.11□□□□□ -1.43
BUD28YLR062C NCB2Q92317 146 aa6.11□□□□□ -1.43
BUD28YLR062C CYB2P00175 591 aa6.1□□□□□ -1.43
BUD28YLR062C PFK2P16862 959 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
BUD28YLR062C SPB4P25808 606 aaPredicted RBP6.1□□□□□ -1.43
BUD28YLR062C YGL242CP53066 181 aa6.1□□□□□ -1.43
BUD28YLR062C RBA50Q04418 439 aa6.1□□□□□ -1.43
BUD28YLR062C PPM2Q08282 695 aa6.1□□□□□ -1.43
BUD28YLR062C ADP1P25371 1049 aa6.09□□□□□ -1.43
BUD28YLR062C BOI1P38041 980 aaKnown RBP6.09□□□□□ -1.43
BUD28YLR062C GRX7P38068 203 aa6.09□□□□□ -1.43
BUD28YLR062C TPS3P38426 1054 aaKnown RBP6.09□□□□□ -1.43
BUD28YLR062C RSC30P38781 883 aa6.09□□□□□ -1.43
BUD28YLR062C TIF11P38912 153 aaKnown RBP6.09□□□□□ -1.43
BUD28YLR062C NCS6P53088 359 aa6.09□□□□□ -1.43
BUD28YLR062C GIN4Q12263 1142 aa6.09□□□□□ -1.43
BUD28YLR062C PMA1P05030 918 aaKnown RBP6.08□□□□□ -1.44
BUD28YLR062C NOP2P40991 618 aaKnown RBP6.08□□□□□ -1.44
BUD28YLR062C ULI1P43604 169 aa6.08□□□□□ -1.44
BUD28YLR062C ALO1P54783 526 aaKnown RBP6.08□□□□□ -1.44
BUD28YLR062C PCL8Q08966 492 aa6.08□□□□□ -1.44
BUD28YLR062C NOT3P06102 836 aaKnown RBP6.07□□□□□ -1.44
BUD28YLR062C ASH1P34233 588 aa6.07□□□□□ -1.44
BUD28YLR062C NMD2P38798 1089 aaKnown RBP6.07□□□□□ -1.44
BUD28YLR062C PIP2P52960 996 aa6.07□□□□□ -1.44
BUD28YLR062C MLC1P53141 149 aa6.07□□□□□ -1.44
BUD28YLR062C PEX29Q03370 554 aa6.07□□□□□ -1.44
BUD28YLR062C KIN1P13185 1064 aa6.06□□□□□ -1.44
BUD28YLR062C YBL028CP38202 106 aa6.06□□□□□ -1.44
BUD28YLR062C MSH4P40965 878 aaPredicted RBP6.06□□□□□ -1.44
BUD28YLR062C REF2P42073 533 aaPredicted RBP6.06□□□□□ -1.44
BUD28YLR062C BDP1P46678 594 aa6.06□□□□□ -1.44
BUD28YLR062C JIP4Q03361 876 aa6.06□□□□□ -1.44
BUD28YLR062C PDR18P53756 1333 aa6.05□□□□□ -1.44
BUD28YLR062C TUB2P02557 457 aaKnown RBP6.05□□□□□ -1.44
BUD28YLR062C PBS2P08018 668 aa6.05□□□□□ -1.44
BUD28YLR062C SDH2P21801 266 aa6.05□□□□□ -1.44
BUD28YLR062C NPL4P33755 580 aa6.05□□□□□ -1.44
BUD28YLR062C GEF1P37020 779 aa6.05□□□□□ -1.44
BUD28YLR062C ECM21P38167 1117 aaKnown RBP6.05□□□□□ -1.44
BUD28YLR062C ACA1P39970 489 aa6.04□□□□□ -1.44
BUD28YLR062C YMR147WP40218 223 aaKnown RBP6.04□□□□□ -1.44
BUD28YLR062C SPR3P41901 512 aa6.04□□□□□ -1.44
BUD28YLR062C IOC3P43596 787 aa6.04□□□□□ -1.44
BUD28YLR062C PIB2P53191 635 aa6.04□□□□□ -1.44
BUD28YLR062C KAR5Q04746 504 aa6.04□□□□□ -1.44
BUD28YLR062C KEL3Q08979 651 aaPredicted RBP6.04□□□□□ -1.44
BUD28YLR062C CDC16P09798 840 aa6.03□□□□□ -1.44
BUD28YLR062C YDJ1P25491 409 aaKnown RBP6.03□□□□□ -1.44
BUD28YLR062C OCT1P35999 772 aa6.03□□□□□ -1.44
BUD28YLR062C YEL023CP39992 682 aa6.03□□□□□ -1.44
BUD28YLR062C NET1P47035 1189 aa6.03□□□□□ -1.44
BUD28YLR062C IRC8P47046 822 aa6.03□□□□□ -1.44
BUD28YLR062C SNU71P53207 620 aaKnown RBP6.03□□□□□ -1.44
BUD28YLR062C YGR273CP53329 174 aa6.03□□□□□ -1.44
BUD28YLR062C YLR225CQ05948 407 aaKnown RBP6.03□□□□□ -1.44
BUD28YLR062C SGD1Q06132 899 aa6.03□□□□□ -1.44
BUD28YLR062C YDL124WQ07551 312 aaKnown RBP6.03□□□□□ -1.44
BUD28YLR062C FBP1P09201 348 aa6.02□□□□□ -1.45
BUD28YLR062C IXR1P33417 597 aa6.02□□□□□ -1.45
BUD28YLR062C PBY1P38254 753 aa6.02□□□□□ -1.45
BUD28YLR062C KIC1P38692 1080 aa6.02□□□□□ -1.45
BUD28YLR062C MRPS35P53292 345 aa6.02□□□□□ -1.45
BUD28YLR062C PKH3Q03306 898 aaPredicted RBP6.02□□□□□ -1.45
BUD28YLR062C YPL260WQ08977 551 aa6.02□□□□□ -1.45
BUD28YLR062C ECM29P38737 1868 aa6.01□□□□□ -1.45
BUD28YLR062C MPH3P0CE00 602 aa6.01□□□□□ -1.45
BUD28YLR062C PRE8P23639 250 aa6.01□□□□□ -1.45
BUD28YLR062C CST26P38226 397 aa6.01□□□□□ -1.45
BUD28YLR062C ERG7P38604 731 aa6.01□□□□□ -1.45
BUD28YLR062C RFC1P38630 861 aaKnown RBP6.01□□□□□ -1.45
BUD28YLR062C OSH3P38713 996 aaKnown RBP6.01□□□□□ -1.45
BUD28YLR062C RMD1Q03441 430 aa6.01□□□□□ -1.45
BUD28YLR062C LDB19Q12502 818 aa6.01□□□□□ -1.45
BUD28YLR062C LAM4P38800 1345 aa6□□□□□ -1.45
BUD28YLR062C SRM1P21827 482 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms