RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	GRX7	P38068	203 aa		4.61	□□□□□ -1.67
LOS1	YKL205W	TIF4632	P39936	914 aa	Known RBP	4.61	□□□□□ -1.67
LOS1	YKL205W	RPT4	P53549	437 aa	Known RBP	4.61	□□□□□ -1.67
LOS1	YKL205W	PER1	P25625	357 aa		4.6	□□□□□ -1.67
LOS1	YKL205W	TPS3	P38426	1054 aa	Known RBP	4.6	□□□□□ -1.67
LOS1	YKL205W	AIM21	P40563	679 aa		4.6	□□□□□ -1.67
LOS1	YKL205W	ROG3	P43602	733 aa		4.6	□□□□□ -1.67
LOS1	YKL205W	AI2	P03876	854 aa		4.6	□□□□□ -1.67
LOS1	YKL205W	PGI1	P12709	554 aa	Known RBP	4.6	□□□□□ -1.67
LOS1	YKL205W	PEP3	P27801	918 aa		4.6	□□□□□ -1.67
LOS1	YKL205W	FBP26	P32604	452 aa		4.6	□□□□□ -1.67
LOS1	YKL205W	BMH2	P34730	273 aa	Known RBP	4.6	□□□□□ -1.67
LOS1	YKL205W	PXL1	P36166	706 aa		4.6	□□□□□ -1.67
LOS1	YKL205W	SOL4	P53315	255 aa		4.6	□□□□□ -1.67
LOS1	YKL205W	MPE1	P35728	441 aa	Known RBP	4.59	□□□□□ -1.67
LOS1	YKL205W	CCT3	P39077	534 aa	Known RBP	4.59	□□□□□ -1.67
LOS1	YKL205W	HST1	P53685	503 aa		4.59	□□□□□ -1.67
LOS1	YKL205W	FUS2	Q05670	677 aa		4.59	□□□□□ -1.67
LOS1	YKL205W	PCT1	P13259	424 aa		4.59	□□□□□ -1.67
LOS1	YKL205W	COQ1	P18900	473 aa		4.59	□□□□□ -1.67
LOS1	YKL205W	YBR287W	P38355	427 aa		4.59	□□□□□ -1.67
LOS1	YKL205W	CEX1	Q12453	761 aa		4.59	□□□□□ -1.67
LOS1	YKL205W	ECM29	P38737	1868 aa		4.59	□□□□□ -1.67
LOS1	YKL205W	SRP54	P20424	541 aa	Known RBP	4.59	□□□□□ -1.68
LOS1	YKL205W	NGR1	P32831	672 aa	Known RBP	4.59	□□□□□ -1.68
LOS1	YKL205W	TIM23	P32897	222 aa		4.59	□□□□□ -1.68
LOS1	YKL205W	EMP47	P43555	445 aa		4.59	□□□□□ -1.68
LOS1	YKL205W	YGL138C	P53122	345 aa		4.59	□□□□□ -1.68
LOS1	YKL205W	CUE3	P53137	624 aa	Known RBP	4.59	□□□□□ -1.68
LOS1	YKL205W	SAS4	Q04003	481 aa		4.59	□□□□□ -1.68
LOS1	YKL205W	RNR3	P21672	869 aa	Known RBP	4.58	□□□□□ -1.68
LOS1	YKL205W	TTI1	P36097	1038 aa		4.58	□□□□□ -1.68
LOS1	YKL205W	RPN1	P38764	993 aa	Known RBP	4.58	□□□□□ -1.68
LOS1	YKL205W	DAK2	P43550	591 aa		4.58	□□□□□ -1.68
LOS1	YKL205W	ALG2	P43636	503 aa		4.58	□□□□□ -1.68
LOS1	YKL205W	PEX21	P50091	288 aa		4.58	□□□□□ -1.68
LOS1	YKL205W	CWH41	P53008	833 aa		4.58	□□□□□ -1.68
LOS1	YKL205W	RRT6	P53117	311 aa	Predicted RBP	4.58	□□□□□ -1.68
LOS1	YKL205W	PKH1	Q03407	766 aa		4.58	□□□□□ -1.68
LOS1	YKL205W	GAL2	P13181	574 aa		4.58	□□□□□ -1.68
LOS1	YKL205W	PIB2	P53191	635 aa		4.58	□□□□□ -1.68
LOS1	YKL205W	CUR1	Q06469	252 aa		4.58	□□□□□ -1.68
LOS1	YKL205W	SRM1	P21827	482 aa		4.57	□□□□□ -1.68
LOS1	YKL205W	SRO9	P25567	434 aa	Known RBP	4.57	□□□□□ -1.68
LOS1	YKL205W	RET3	P53600	189 aa		4.57	□□□□□ -1.68
LOS1	YKL205W	MSM1	P22438	575 aa		4.57	□□□□□ -1.68
LOS1	YKL205W	GAS5	Q08193	484 aa		4.57	□□□□□ -1.68
LOS1	YKL205W	HVG1	P0CE11	249 aa		4.57	□□□□□ -1.68
LOS1	YKL205W	PRE8	P23639	250 aa		4.57	□□□□□ -1.68
LOS1	YKL205W	UGA4	P32837	571 aa		4.57	□□□□□ -1.68
LOS1	YKL205W	MOT2	P34909	587 aa	Known RBP	4.57	□□□□□ -1.68
LOS1	YKL205W	PTK1	P36002	662 aa	Predicted RBP	4.57	□□□□□ -1.68
LOS1	YKL205W	RFC1	P38630	861 aa	Known RBP	4.57	□□□□□ -1.68
LOS1	YKL205W	BDP1	P46678	594 aa		4.57	□□□□□ -1.68
LOS1	YKL205W	ENP2	P48234	707 aa	Known RBP	4.57	□□□□□ -1.68
LOS1	YKL205W	NAF1	P53919	492 aa	Known RBP	4.57	□□□□□ -1.68
LOS1	YKL205W	INM2	Q05533	292 aa		4.57	□□□□□ -1.68
LOS1	YKL205W	HRQ1	Q05549	1077 aa		4.57	□□□□□ -1.68
LOS1	YKL205W	DDP1	Q99321	188 aa	Known RBP	4.57	□□□□□ -1.68
LOS1	YKL205W	RAD53	P22216	821 aa		4.56	□□□□□ -1.68
LOS1	YKL205W	RME1	P32338	300 aa	Known RBP	4.56	□□□□□ -1.68
LOS1	YKL205W	NSG2	P53898	299 aa		4.56	□□□□□ -1.68
LOS1	YKL205W	ELG1	Q12050	791 aa		4.56	□□□□□ -1.68
LOS1	YKL205W	FOB1	O13329	566 aa		4.56	□□□□□ -1.68
LOS1	YKL205W	KEX1	P09620	729 aa		4.56	□□□□□ -1.68
LOS1	YKL205W	CKA2	P19454	339 aa		4.56	□□□□□ -1.68
LOS1	YKL205W	BMH1	P29311	267 aa	Known RBP	4.56	□□□□□ -1.68
LOS1	YKL205W	ANP1	P32629	500 aa		4.56	□□□□□ -1.68
LOS1	YKL205W	HXT13	P39924	564 aa		4.56	□□□□□ -1.68
LOS1	YKL205W	JJJ2	P46997	583 aa		4.56	□□□□□ -1.68
LOS1	YKL205W	ALG1	P16661	449 aa		4.56	□□□□□ -1.68
LOS1	YKL205W	SCJ1	P25303	377 aa		4.56	□□□□□ -1.68
LOS1	YKL205W	RER2	P35196	286 aa		4.56	□□□□□ -1.68
LOS1	YKL205W	NET1	P47035	1189 aa		4.56	□□□□□ -1.68
LOS1	YKL205W	LAA1	P39526	2014 aa		4.55	□□□□□ -1.68
LOS1	YKL205W	CTI6	Q08923	506 aa		4.55	□□□□□ -1.68
LOS1	YKL205W	VAS1	P07806	1104 aa	Known RBP	4.55	□□□□□ -1.68
LOS1	YKL205W	TAF13	P11747	167 aa		4.55	□□□□□ -1.68
LOS1	YKL205W	MAK31	P23059	88 aa		4.55	□□□□□ -1.68
LOS1	YKL205W	PBY1	P38254	753 aa		4.55	□□□□□ -1.68
LOS1	YKL205W	PEA2	P40091	420 aa		4.55	□□□□□ -1.68
LOS1	YKL205W	PIP2	P52960	996 aa		4.55	□□□□□ -1.68
LOS1	YKL205W	PUS6	P53294	404 aa		4.55	□□□□□ -1.68
LOS1	YKL205W	ISA1	Q07821	250 aa	Predicted RBP	4.55	□□□□□ -1.68
LOS1	YKL205W	NUC1	P08466	329 aa		4.54	□□□□□ -1.68
LOS1	YKL205W	TGL1	P34163	548 aa		4.54	□□□□□ -1.68
LOS1	YKL205W	VPS24	P36095	224 aa	Known RBP	4.54	□□□□□ -1.68
LOS1	YKL205W	KEL1	P38853	1164 aa	Known RBP	4.54	□□□□□ -1.68
LOS1	YKL205W	HXT17	P53631	564 aa		4.54	□□□□□ -1.68
LOS1	YKL205W	GDE1	Q02979	1223 aa		4.54	□□□□□ -1.68
LOS1	YKL205W	ERG12	P07277	443 aa		4.54	□□□□□ -1.68
LOS1	YKL205W	SRS2	P12954	1174 aa		4.54	□□□□□ -1.68
LOS1	YKL205W	DSE3	Q08729	430 aa		4.54	□□□□□ -1.68
LOS1	YKL205W	SRF1	Q12516	437 aa		4.54	□□□□□ -1.68
LOS1	YKL205W	MBR1	P23493	339 aa		4.54	□□□□□ -1.68
LOS1	YKL205W	CST26	P38226	397 aa		4.54	□□□□□ -1.68
LOS1	YKL205W	STM1	P39015	273 aa	Known RBP	4.54	□□□□□ -1.68
LOS1	YKL205W	CIR1	P42940	261 aa		4.54	□□□□□ -1.68
LOS1	YKL205W	MDM1	Q01846	1127 aa		4.54	□□□□□ -1.68
LOS1	YKL205W	YML020W	Q03722	664 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms