RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	SAC7	P17121	654 aa		4.61	□□□□□ -1.67
SPE1	YKL184W	YCK2	P23292	546 aa	Known RBP	4.61	□□□□□ -1.67
SPE1	YKL184W	TED1	P40533	473 aa		4.61	□□□□□ -1.67
SPE1	YKL184W	BUD9	P53226	547 aa		4.61	□□□□□ -1.67
SPE1	YKL184W	BIO5	P53744	561 aa	Known RBP	4.61	□□□□□ -1.67
SPE1	YKL184W	YNL011C	P53980	444 aa		4.61	□□□□□ -1.67
SPE1	YKL184W	TY4A-H	Q6Q5P6	413 aa		4.61	□□□□□ -1.67
SPE1	YKL184W	ERP5	P38819	212 aa		4.6	□□□□□ -1.67
SPE1	YKL184W	SOG2	Q08817	791 aa		4.6	□□□□□ -1.67
SPE1	YKL184W	AI3	P03877	415 aa		4.59	□□□□□ -1.67
SPE1	YKL184W	TRL1	P09880	827 aa	Known RBP	4.59	□□□□□ -1.67
SPE1	YKL184W	SFA1	P32771	386 aa		4.59	□□□□□ -1.67
SPE1	YKL184W	LSB6	P42951	607 aa		4.59	□□□□□ -1.67
SPE1	YKL184W	RSC4	Q02206	625 aa		4.59	□□□□□ -1.67
SPE1	YKL184W	RSC6	P25632	483 aa		4.58	□□□□□ -1.68
SPE1	YKL184W	PYC2	P32327	1180 aa	Known RBP	4.58	□□□□□ -1.68
SPE1	YKL184W	NEO1	P40527	1151 aa		4.58	□□□□□ -1.68
SPE1	YKL184W	ALD3	P54114	506 aa		4.58	□□□□□ -1.68
SPE1	YKL184W	CDC55	Q00362	526 aa		4.58	□□□□□ -1.68
SPE1	YKL184W	SPO71	Q03868	1245 aa		4.58	□□□□□ -1.68
SPE1	YKL184W	BSC2	Q05611	235 aa		4.58	□□□□□ -1.68
SPE1	YKL184W	MCA1	Q08601	432 aa		4.58	□□□□□ -1.68
SPE1	YKL184W	YHL008C	P38750	627 aa		4.57	□□□□□ -1.68
SPE1	YKL184W	PAN5	P38787	379 aa		4.57	□□□□□ -1.68
SPE1	YKL184W	MDJ2	P42834	146 aa		4.57	□□□□□ -1.68
SPE1	YKL184W	YPL034W	Q03083	165 aa		4.57	□□□□□ -1.68
SPE1	YKL184W	MAE1	P36013	669 aa	Known RBP	4.56	□□□□□ -1.68
SPE1	YKL184W	AMN1	P38285	549 aa	Predicted RBP	4.56	□□□□□ -1.68
SPE1	YKL184W	FET4	P40988	552 aa		4.56	□□□□□ -1.68
SPE1	YKL184W	YJR124C	P47159	448 aa		4.56	□□□□□ -1.68
SPE1	YKL184W	ARI1	P53111	347 aa	Known RBP	4.56	□□□□□ -1.68
SPE1	YKL184W	GAS5	Q08193	484 aa		4.56	□□□□□ -1.68
SPE1	YKL184W	STM1	P39015	273 aa	Known RBP	4.55	□□□□□ -1.68
SPE1	YKL184W	SAM37	P50110	327 aa		4.55	□□□□□ -1.68
SPE1	YKL184W	YNR065C	P53751	1116 aa		4.55	□□□□□ -1.68
SPE1	YKL184W	GLO4	Q12320	285 aa		4.55	□□□□□ -1.68
SPE1	YKL184W	COQ2	P32378	372 aa		4.55	□□□□□ -1.68
SPE1	YKL184W	TFA2	P36145	328 aa		4.55	□□□□□ -1.68
SPE1	YKL184W	FAR11	P53917	953 aa		4.55	□□□□□ -1.68
SPE1	YKL184W	YHL050C	P38721	697 aa		4.54	□□□□□ -1.68
SPE1	YKL184W	YHR219W	P38900	624 aa		4.54	□□□□□ -1.68
SPE1	YKL184W	NUT2	Q06213	157 aa		4.54	□□□□□ -1.68
SPE1	YKL184W	NOC3	Q07896	663 aa	Predicted RBP	4.54	□□□□□ -1.68
SPE1	YKL184W	ELG1	Q12050	791 aa		4.54	□□□□□ -1.68
SPE1	YKL184W	YLL054C	Q12244	843 aa		4.54	□□□□□ -1.68
SPE1	YKL184W	TY1A-NL1	Q12391	440 aa	Known RBP	4.54	□□□□□ -1.68
SPE1	YKL184W	CIC1	P38779	376 aa	Known RBP	4.53	□□□□□ -1.68
SPE1	YKL184W	SSF1	P38789	453 aa	Predicted RBP	4.53	□□□□□ -1.68
SPE1	YKL184W	POL5	P39985	1022 aa	Known RBP	4.53	□□□□□ -1.68
SPE1	YKL184W	CTR9	P89105	1077 aa		4.53	□□□□□ -1.68
SPE1	YKL184W	YMR074C	Q04773	145 aa		4.53	□□□□□ -1.68
SPE1	YKL184W	MNL2	Q12205	849 aa		4.53	□□□□□ -1.68
SPE1	YKL184W	SLD2	P34252	453 aa		4.52	□□□□□ -1.69
SPE1	YKL184W	HAS1	Q03532	505 aa	Known RBP	4.52	□□□□□ -1.69
SPE1	YKL184W	INP54	Q08227	384 aa	Known RBP	4.52	□□□□□ -1.69
SPE1	YKL184W	FRT1	Q99332	602 aa		4.52	□□□□□ -1.69
SPE1	YKL184W	FLP1	P03870	423 aa		4.51	□□□□□ -1.69
SPE1	YKL184W	HVG1	P0CE11	249 aa		4.51	□□□□□ -1.69
SPE1	YKL184W	CHS2	P14180	963 aa		4.51	□□□□□ -1.69
SPE1	YKL184W	NPR1	P22211	790 aa		4.51	□□□□□ -1.69
SPE1	YKL184W	GCD6	P32501	712 aa	Known RBP	4.51	□□□□□ -1.69
SPE1	YKL184W	THI12	P42883	340 aa		4.51	□□□□□ -1.69
SPE1	YKL184W	THI5	P43534	340 aa		4.51	□□□□□ -1.69
SPE1	YKL184W	THI11	P47183	340 aa		4.51	□□□□□ -1.69
SPE1	YKL184W	PMT7	Q06644	662 aa		4.51	□□□□□ -1.69
SPE1	YKL184W	THI13	Q07748	340 aa		4.51	□□□□□ -1.69
SPE1	YKL184W	SEC20	P28791	383 aa		4.5	□□□□□ -1.69
SPE1	YKL184W	KAE1	P36132	386 aa		4.5	□□□□□ -1.69
SPE1	YKL184W	RVS167	P39743	482 aa	Known RBP	4.5	□□□□□ -1.69
SPE1	YKL184W	MSH6	Q03834	1242 aa		4.5	□□□□□ -1.69
SPE1	YKL184W	SAF1	P38352	637 aa		4.49	□□□□□ -1.69
SPE1	YKL184W	KIP3	P53086	805 aa	Known RBP	4.49	□□□□□ -1.69
SPE1	YKL184W	NUT1	P53114	1132 aa		4.49	□□□□□ -1.69
SPE1	YKL184W	MSC6	Q08818	692 aa	Known RBP	4.49	□□□□□ -1.69
SPE1	YKL184W	YOR223W	Q12015	292 aa		4.49	□□□□□ -1.69
SPE1	YKL184W	HTS1	P07263	546 aa	Known RBP	4.48	□□□□□ -1.69
SPE1	YKL184W	ERS1	P17261	260 aa		4.48	□□□□□ -1.69
SPE1	YKL184W	MCM5	P29496	775 aa	Known RBP	4.48	□□□□□ -1.69
SPE1	YKL184W	RIM11	P38615	370 aa		4.48	□□□□□ -1.69
SPE1	YKL184W	PPX1	P38698	397 aa		4.48	□□□□□ -1.69
SPE1	YKL184W	SHU2	P38957	223 aa		4.48	□□□□□ -1.69
SPE1	YKL184W	AKR1	P39010	764 aa		4.48	□□□□□ -1.69
SPE1	YKL184W	GCV1	P48015	400 aa		4.48	□□□□□ -1.69
SPE1	YKL184W	YCS4	Q06156	1176 aa		4.48	□□□□□ -1.69
SPE1	YKL184W	GPI13	Q07830	1017 aa		4.48	□□□□□ -1.69
SPE1	YKL184W	OXR1	Q08952	273 aa		4.48	□□□□□ -1.69
SPE1	YKL184W	REC8	Q12188	680 aa		4.48	□□□□□ -1.69
SPE1	YKL184W	CMR1	Q12510	522 aa	Known RBP	4.48	□□□□□ -1.69
SPE1	YKL184W	COB	P00163	385 aa		4.47	□□□□□ -1.69
SPE1	YKL184W	PRP5	P21372	849 aa	Predicted RBP	4.47	□□□□□ -1.69
SPE1	YKL184W	PGM1	P33401	570 aa	Known RBP	4.47	□□□□□ -1.69
SPE1	YKL184W	MAC1	P35192	417 aa		4.47	□□□□□ -1.69
SPE1	YKL184W	YKL077W	P36081	392 aa		4.47	□□□□□ -1.69
SPE1	YKL184W	UTP22	P53254	1237 aa	Predicted RBP	4.47	□□□□□ -1.69
SPE1	YKL184W	GIC2	Q06648	383 aa		4.47	□□□□□ -1.69
SPE1	YKL184W	YIG1	Q08956	461 aa		4.47	□□□□□ -1.69
SPE1	YKL184W	VPS35	P34110	944 aa		4.46	□□□□□ -1.69
SPE1	YKL184W	MON1	P53129	644 aa		4.46	□□□□□ -1.69
SPE1	YKL184W	NCE103	P53615	221 aa		4.46	□□□□□ -1.69
SPE1	YKL184W	YAF9	P53930	226 aa		4.46	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms