RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W SLP1Q12232 587 aa5.71□□□□□ -1.5
VMA5YKL080W CDC3P32457 520 aaKnown RBP5.7□□□□□ -1.5
VMA5YKL080W SOK2P53438 785 aaPredicted RBP5.7□□□□□ -1.5
VMA5YKL080W RSC2Q06488 889 aa5.7□□□□□ -1.5
VMA5YKL080W YLR122CQ12312 125 aa5.7□□□□□ -1.5
VMA5YKL080W TY1A-NL1Q12391 440 aaKnown RBP5.7□□□□□ -1.5
VMA5YKL080W TIF6Q12522 245 aaKnown RBP5.7□□□□□ -1.5
VMA5YKL080W SMC1P32908 1225 aa5.69□□□□□ -1.5
VMA5YKL080W NTA1P40354 457 aa5.69□□□□□ -1.5
VMA5YKL080W HAT1Q12341 374 aa5.69□□□□□ -1.5
VMA5YKL080W CTH1P47976 325 aa5.68□□□□□ -1.5
VMA5YKL080W GRS1P38088 690 aaKnown RBP5.67□□□□□ -1.5
VMA5YKL080W PSY2P40164 858 aa5.67□□□□□ -1.5
VMA5YKL080W IRC24P40580 263 aa5.67□□□□□ -1.5
VMA5YKL080W RSC6P25632 483 aa5.66□□□□□ -1.5
VMA5YKL080W NAM7P30771 971 aaKnown RBP5.66□□□□□ -1.5
VMA5YKL080W COQ2P32378 372 aa5.66□□□□□ -1.5
VMA5YKL080W IRS4P36115 615 aaKnown RBP5.66□□□□□ -1.5
VMA5YKL080W KAE1P36132 386 aa5.66□□□□□ -1.5
VMA5YKL080W INP51P40559 946 aaKnown RBP5.66□□□□□ -1.5
VMA5YKL080W MED7Q08278 222 aa5.66□□□□□ -1.5
VMA5YKL080W ERP5P38819 212 aa5.65□□□□□ -1.5
VMA5YKL080W YBL113CQ7M4S9 792 aa5.65□□□□□ -1.5
VMA5YKL080W SAF1P38352 637 aa5.64□□□□□ -1.51
VMA5YKL080W AVT1P47082 602 aa5.64□□□□□ -1.51
VMA5YKL080W ATG1P53104 897 aa5.64□□□□□ -1.51
VMA5YKL080W TRL1P09880 827 aaKnown RBP5.63□□□□□ -1.51
VMA5YKL080W BIO5P53744 561 aaKnown RBP5.63□□□□□ -1.51
VMA5YKL080W PYC2P32327 1180 aaKnown RBP5.62□□□□□ -1.51
VMA5YKL080W TFA2P36145 328 aa5.62□□□□□ -1.51
VMA5YKL080W TOS1P38288 455 aa5.62□□□□□ -1.51
VMA5YKL080W ACF4P47129 309 aa5.62□□□□□ -1.51
VMA5YKL080W YGR130CP53278 816 aa5.62□□□□□ -1.51
VMA5YKL080W ALD3P54114 506 aa5.62□□□□□ -1.51
VMA5YKL080W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
VMA5YKL080W REC8Q12188 680 aa5.62□□□□□ -1.51
VMA5YKL080W FUS1P11710 512 aa5.61□□□□□ -1.51
VMA5YKL080W PUB1P32588 453 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51 RIP-Chip
VMA5YKL080W MDJ2P42834 146 aa5.61□□□□□ -1.51
VMA5YKL080W UFD2P54860 961 aa5.61□□□□□ -1.51
VMA5YKL080W TRS120Q04183 1289 aa5.61□□□□□ -1.51
VMA5YKL080W ECM2P38241 364 aaKnown RBP5.6□□□□□ -1.51
VMA5YKL080W PAN5P38787 379 aa5.6□□□□□ -1.51
VMA5YKL080W AKR1P39010 764 aa5.6□□□□□ -1.51
VMA5YKL080W NEO1P40527 1151 aa5.6□□□□□ -1.51
VMA5YKL080W YJR124CP47159 448 aa5.6□□□□□ -1.51
VMA5YKL080W DSE4P53753 1117 aa5.6□□□□□ -1.51
VMA5YKL080W YNL011CP53980 444 aa5.59□□□□□ -1.51
VMA5YKL080W BRE4Q07660 1125 aa5.59□□□□□ -1.51
VMA5YKL080W CHS2P14180 963 aa5.58□□□□□ -1.52
VMA5YKL080W LIP5P32875 414 aa5.58□□□□□ -1.52
VMA5YKL080W GUP1P53154 560 aa5.58□□□□□ -1.52
VMA5YKL080W YNR065CP53751 1116 aa5.58□□□□□ -1.52
VMA5YKL080W CTR9P89105 1077 aa5.58□□□□□ -1.52
VMA5YKL080W SOG2Q08817 791 aa5.58□□□□□ -1.52
VMA5YKL080W FRT1Q99332 602 aa5.58□□□□□ -1.52
VMA5YKL080W POL5P39985 1022 aaKnown RBP5.57□□□□□ -1.52
VMA5YKL080W RSC4Q02206 625 aa5.57□□□□□ -1.52
VMA5YKL080W MAG2Q06436 670 aaKnown RBP5.57□□□□□ -1.52
VMA5YKL080W GLO4Q12320 285 aa5.57□□□□□ -1.52
VMA5YKL080W SEA4P38164 1038 aa5.56□□□□□ -1.52
VMA5YKL080W NCE103P53615 221 aa5.56□□□□□ -1.52
VMA5YKL080W NUT2Q06213 157 aa5.56□□□□□ -1.52
VMA5YKL080W MNL2Q12205 849 aa5.56□□□□□ -1.52
VMA5YKL080W COBP00163 385 aa5.55□□□□□ -1.52
VMA5YKL080W YHL008CP38750 627 aa5.55□□□□□ -1.52
VMA5YKL080W SPO74P45819 413 aa5.55□□□□□ -1.52
VMA5YKL080W BSC2Q05611 235 aa5.55□□□□□ -1.52
VMA5YKL080W CYC7P00045 113 aa5.54□□□□□ -1.52
VMA5YKL080W DUR3P33413 735 aa5.54□□□□□ -1.52
VMA5YKL080W HAS1Q03532 505 aaKnown RBP5.54□□□□□ -1.52
VMA5YKL080W SPO71Q03868 1245 aa5.54□□□□□ -1.52
VMA5YKL080W GPI13Q07830 1017 aa5.54□□□□□ -1.52
VMA5YKL080W MAE1P36013 669 aaKnown RBP5.53□□□□□ -1.52
VMA5YKL080W YHL050CP38721 697 aa5.53□□□□□ -1.52
VMA5YKL080W YHR219WP38900 624 aa5.53□□□□□ -1.52
VMA5YKL080W FET4P40988 552 aa5.53□□□□□ -1.52
VMA5YKL080W LEM3P42838 414 aa5.53□□□□□ -1.52
VMA5YKL080W CDC55Q00362 526 aa5.53□□□□□ -1.52
VMA5YKL080W AOS1Q06624 347 aa5.53□□□□□ -1.52
VMA5YKL080W INP54Q08227 384 aaKnown RBP5.53□□□□□ -1.52
VMA5YKL080W ERS1P17261 260 aa5.52□□□□□ -1.53
VMA5YKL080W YMR074CQ04773 145 aa5.52□□□□□ -1.53
VMA5YKL080W ELG1Q12050 791 aa5.52□□□□□ -1.53
VMA5YKL080W ELM1P32801 640 aa5.51□□□□□ -1.53
VMA5YKL080W FLP1P03870 423 aa5.5□□□□□ -1.53
VMA5YKL080W HVG1P0CE11 249 aa5.5□□□□□ -1.53
VMA5YKL080W NPR1P22211 790 aa5.5□□□□□ -1.53
VMA5YKL080W SSF1P38789 453 aaPredicted RBP5.5□□□□□ -1.53
VMA5YKL080W THI12P42883 340 aa5.5□□□□□ -1.53
VMA5YKL080W THI5P43534 340 aa5.5□□□□□ -1.53
VMA5YKL080W THI11P47183 340 aa5.5□□□□□ -1.53
VMA5YKL080W KIP3P53086 805 aaKnown RBP5.5□□□□□ -1.53
VMA5YKL080W MON1P53129 644 aa5.5□□□□□ -1.53
VMA5YKL080W THI13Q07748 340 aa5.5□□□□□ -1.53
VMA5YKL080W MSB1P21339 1137 aaKnown RBP5.49□□□□□ -1.53
VMA5YKL080W NOC3Q07896 663 aaPredicted RBP5.49□□□□□ -1.53
VMA5YKL080W CMR1Q12510 522 aaKnown RBP5.49□□□□□ -1.53
VMA5YKL080W MCM5P29496 775 aaKnown RBP5.47□□□□□ -1.53
VMA5YKL080W RIM11P38615 370 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms