RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeast

Gene SWD2, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD2	YKL018W	ECM2	P38241	364 aa	Known RBP	6.03	□□□□□ -1.44
SWD2	YKL018W	BUD9	P53226	547 aa		6.03	□□□□□ -1.44
SWD2	YKL018W	FUS1	P11710	512 aa		6.02	□□□□□ -1.45
SWD2	YKL018W	OMA1	P36163	345 aa		6.02	□□□□□ -1.45
SWD2	YKL018W	INP52	P50942	1183 aa		6.02	□□□□□ -1.45
SWD2	YKL018W	HAT1	Q12341	374 aa		6.02	□□□□□ -1.45
SWD2	YKL018W	SAC7	P17121	654 aa		6.01	□□□□□ -1.45
SWD2	YKL018W	GRS1	P38088	690 aa	Known RBP	6.01	□□□□□ -1.45
SWD2	YKL018W	ACF4	P47129	309 aa		6.01	□□□□□ -1.45
SWD2	YKL018W	GUP1	P53154	560 aa		6.01	□□□□□ -1.45
SWD2	YKL018W	DSE4	P53753	1117 aa		6.01	□□□□□ -1.45
SWD2	YKL018W	GAS5	Q08193	484 aa		6.01	□□□□□ -1.45
SWD2	YKL018W	TY4B-P	A0A0B7P3V8	1104 aa		6	□□□□□ -1.45
SWD2	YKL018W	LEM3	P42838	414 aa		6	□□□□□ -1.45
SWD2	YKL018W	BIO5	P53744	561 aa	Known RBP	6	□□□□□ -1.45
SWD2	YKL018W	TY4A-H	Q6Q5P6	413 aa		6	□□□□□ -1.45
SWD2	YKL018W	AI3	P03877	415 aa		5.99	□□□□□ -1.45
SWD2	YKL018W	RSC6	P25632	483 aa		5.99	□□□□□ -1.45
SWD2	YKL018W	NEO1	P40527	1151 aa		5.99	□□□□□ -1.45
SWD2	YKL018W	ALD3	P54114	506 aa		5.99	□□□□□ -1.45
SWD2	YKL018W	YBL113C	Q7M4S9	792 aa		5.99	□□□□□ -1.45
SWD2	YKL018W	SFA1	P32771	386 aa		5.98	□□□□□ -1.45
SWD2	YKL018W	PAN5	P38787	379 aa		5.98	□□□□□ -1.45
SWD2	YKL018W	TRS120	Q04183	1289 aa		5.98	□□□□□ -1.45
SWD2	YKL018W	SOG2	Q08817	791 aa		5.98	□□□□□ -1.45
SWD2	YKL018W	PYC2	P32327	1180 aa	Known RBP	5.97	□□□□□ -1.45
SWD2	YKL018W	ERP5	P38819	212 aa		5.97	□□□□□ -1.45
SWD2	YKL018W	YNL011C	P53980	444 aa		5.97	□□□□□ -1.45
SWD2	YKL018W	COQ2	P32378	372 aa		5.96	□□□□□ -1.46
SWD2	YKL018W	YJR124C	P47159	448 aa		5.96	□□□□□ -1.46
SWD2	YKL018W	ARI1	P53111	347 aa	Known RBP	5.96	□□□□□ -1.46
SWD2	YKL018W	SPO71	Q03868	1245 aa		5.96	□□□□□ -1.46
SWD2	YKL018W	MAE1	P36013	669 aa	Known RBP	5.95	□□□□□ -1.46
SWD2	YKL018W	TFA2	P36145	328 aa		5.95	□□□□□ -1.46
SWD2	YKL018W	BSC2	Q05611	235 aa		5.95	□□□□□ -1.46
SWD2	YKL018W	TRL1	P09880	827 aa	Known RBP	5.94	□□□□□ -1.46
SWD2	YKL018W	YHL008C	P38750	627 aa		5.94	□□□□□ -1.46
SWD2	YKL018W	FET4	P40988	552 aa		5.94	□□□□□ -1.46
SWD2	YKL018W	AVT1	P47082	602 aa		5.94	□□□□□ -1.46
SWD2	YKL018W	RSC4	Q02206	625 aa		5.94	□□□□□ -1.46
SWD2	YKL018W	YNR065C	P53751	1116 aa		5.93	□□□□□ -1.46
SWD2	YKL018W	GLO4	Q12320	285 aa		5.93	□□□□□ -1.46
SWD2	YKL018W	TY1A-NL1	Q12391	440 aa	Known RBP	5.93	□□□□□ -1.46
SWD2	YKL018W	MDJ2	P42834	146 aa		5.92	□□□□□ -1.46
SWD2	YKL018W	CDC55	Q00362	526 aa		5.92	□□□□□ -1.46
SWD2	YKL018W	YMR074C	Q04773	145 aa		5.92	□□□□□ -1.46
SWD2	YKL018W	ELG1	Q12050	791 aa		5.92	□□□□□ -1.46
SWD2	YKL018W	POL5	P39985	1022 aa	Known RBP	5.91	□□□□□ -1.46
SWD2	YKL018W	FAR11	P53917	953 aa		5.91	□□□□□ -1.46
SWD2	YKL018W	AKR1	P39010	764 aa		5.9	□□□□□ -1.46
SWD2	YKL018W	HAS1	Q03532	505 aa	Known RBP	5.9	□□□□□ -1.46
SWD2	YKL018W	KAE1	P36132	386 aa		5.89	□□□□□ -1.47
SWD2	YKL018W	CTR9	P89105	1077 aa		5.89	□□□□□ -1.47
SWD2	YKL018W	NUT2	Q06213	157 aa		5.89	□□□□□ -1.47
SWD2	YKL018W	CHS2	P14180	963 aa		5.88	□□□□□ -1.47
SWD2	YKL018W	NOC3	Q07896	663 aa	Predicted RBP	5.88	□□□□□ -1.47
SWD2	YKL018W	INP54	Q08227	384 aa	Known RBP	5.88	□□□□□ -1.47
SWD2	YKL018W	YLL054C	Q12244	843 aa		5.88	□□□□□ -1.47
SWD2	YKL018W	FRT1	Q99332	602 aa		5.88	□□□□□ -1.47
SWD2	YKL018W	SAF1	P38352	637 aa		5.87	□□□□□ -1.47
SWD2	YKL018W	YHL050C	P38721	697 aa		5.87	□□□□□ -1.47
SWD2	YKL018W	YHR219W	P38900	624 aa		5.87	□□□□□ -1.47
SWD2	YKL018W	SAM37	P50110	327 aa		5.87	□□□□□ -1.47
SWD2	YKL018W	KIP3	P53086	805 aa	Known RBP	5.87	□□□□□ -1.47
SWD2	YKL018W	REC8	Q12188	680 aa		5.87	□□□□□ -1.47
SWD2	YKL018W	MNL2	Q12205	849 aa		5.87	□□□□□ -1.47
SWD2	YKL018W	HVG1	P0CE11	249 aa		5.86	□□□□□ -1.47
SWD2	YKL018W	ERS1	P17261	260 aa		5.86	□□□□□ -1.47
SWD2	YKL018W	NPR1	P22211	790 aa		5.86	□□□□□ -1.47
SWD2	YKL018W	NAM7	P30771	971 aa	Known RBP	5.86	□□□□□ -1.47
SWD2	YKL018W	AOS1	Q06624	347 aa		5.86	□□□□□ -1.47
SWD2	YKL018W	FLP1	P03870	423 aa		5.85	□□□□□ -1.47
SWD2	YKL018W	PGM1	P33401	570 aa	Known RBP	5.85	□□□□□ -1.47
SWD2	YKL018W	CIC1	P38779	376 aa	Known RBP	5.85	□□□□□ -1.47
SWD2	YKL018W	SSF1	P38789	453 aa	Predicted RBP	5.85	□□□□□ -1.47
SWD2	YKL018W	STM1	P39015	273 aa	Known RBP	5.85	□□□□□ -1.47
SWD2	YKL018W	THI12	P42883	340 aa		5.85	□□□□□ -1.47
SWD2	YKL018W	THI5	P43534	340 aa		5.85	□□□□□ -1.47
SWD2	YKL018W	THI11	P47183	340 aa		5.85	□□□□□ -1.47
SWD2	YKL018W	THI13	Q07748	340 aa		5.85	□□□□□ -1.47
SWD2	YKL018W	COB	P00163	385 aa		5.84	□□□□□ -1.47
SWD2	YKL018W	NCE103	P53615	221 aa		5.84	□□□□□ -1.47
SWD2	YKL018W	PMT7	Q06644	662 aa		5.84	□□□□□ -1.47
SWD2	YKL018W	MED7	Q08278	222 aa		5.84	□□□□□ -1.47
SWD2	YKL018W	YOR223W	Q12015	292 aa		5.84	□□□□□ -1.47
SWD2	YKL018W	YLR122C	Q12312	125 aa		5.84	□□□□□ -1.47
SWD2	YKL018W	CMR1	Q12510	522 aa	Known RBP	5.84	□□□□□ -1.47
SWD2	YKL018W	MCM5	P29496	775 aa	Known RBP	5.83	□□□□□ -1.48
SWD2	YKL018W	RIM11	P38615	370 aa		5.83	□□□□□ -1.48
SWD2	YKL018W	MON1	P53129	644 aa		5.83	□□□□□ -1.48
SWD2	YKL018W	YGR130C	P53278	816 aa		5.83	□□□□□ -1.48
SWD2	YKL018W	MSH6	Q03834	1242 aa		5.83	□□□□□ -1.48
SWD2	YKL018W	GIC2	Q06648	383 aa		5.83	□□□□□ -1.48
SWD2	YKL018W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
SWD2	YKL018W	RVS167	P39743	482 aa	Known RBP	5.82	□□□□□ -1.48
SWD2	YKL018W	GCV1	P48015	400 aa		5.82	□□□□□ -1.48
SWD2	YKL018W	NUT1	P53114	1132 aa		5.82	□□□□□ -1.48
SWD2	YKL018W	GPI13	Q07830	1017 aa		5.82	□□□□□ -1.48
SWD2	YKL018W	HTS1	P07263	546 aa	Known RBP	5.81	□□□□□ -1.48
SWD2	YKL018W	GCD6	P32501	712 aa	Known RBP	5.81	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms