RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT6	YGR116W	SPT5	P27692	1063 aa	Known RBP	4.09	□□□□□ -1.75
SPT6	YGR116W	SWC3	P31376	625 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	SRB4	P32569	687 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	SRP40	P32583	406 aa	Predicted RBP	4.09	□□□□□ -1.75
SPT6	YGR116W	VTC3	Q02725	835 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	SPO19	Q03029	223 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	APL4	Q12028	832 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	HXK1	P04806	485 aa	Known RBP	4.09	□□□□□ -1.75
SPT6	YGR116W	PDC1	P06169	563 aa	Known RBP	4.09	□□□□□ -1.75
SPT6	YGR116W	MATALPHA2	P0CY08	210 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	HMLALPHA2	P0CY09	210 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	MRPS28	P21771	286 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	PCH2	P38126	564 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	CIC1	P38779	376 aa	Known RBP	4.09	□□□□□ -1.75
SPT6	YGR116W	BUD16	P39988	312 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	ISW2	Q08773	1120 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	RRP43	P25359	394 aa	Predicted RBP	4.09	□□□□□ -1.75
SPT6	YGR116W	ASF1	P32447	279 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	SAC6	P32599	642 aa	Known RBP	4.09	□□□□□ -1.75
SPT6	YGR116W	STO1	P34160	861 aa	Known RBP	4.09	□□□□□ -1.75
SPT6	YGR116W	VID28	P40547	921 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	HUL4	P40985	892 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	MRPS35	P53292	345 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	YDR306C	Q06640	478 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	VAC14	Q06708	880 aa		4.09	□□□□□ -1.75
SPT6	YGR116W	CDC8	P00572	216 aa		4.09	□□□□□ -1.76
SPT6	YGR116W	RAD1	P06777	1100 aa		4.09	□□□□□ -1.76
SPT6	YGR116W	PHO13	P19881	312 aa		4.09	□□□□□ -1.76
SPT6	YGR116W	ADE17	P38009	592 aa	Known RBP	4.09	□□□□□ -1.76
SPT6	YGR116W	PXR1	P53335	271 aa	Predicted RBP	4.09	□□□□□ -1.76
SPT6	YGR116W	RAD5	P32849	1169 aa	Predicted RBP	4.08	□□□□□ -1.76
SPT6	YGR116W	YSW1	P38280	609 aa		4.08	□□□□□ -1.76
SPT6	YGR116W	EFM2	P38347	419 aa		4.08	□□□□□ -1.76
SPT6	YGR116W	TRS85	P46944	698 aa		4.08	□□□□□ -1.76
SPT6	YGR116W	LCB5	Q06147	687 aa	Known RBP	4.08	□□□□□ -1.76
SPT6	YGR116W	SEC23	P15303	768 aa	Known RBP	4.08	□□□□□ -1.76
SPT6	YGR116W	ENP2	P48234	707 aa	Known RBP	4.08	□□□□□ -1.76
SPT6	YGR116W	YNR029C	P53729	429 aa	Known RBP	4.08	□□□□□ -1.76
SPT6	YGR116W	RGP1	P16664	663 aa		4.08	□□□□□ -1.76
SPT6	YGR116W	CDC60	P26637	1090 aa	Known RBP	4.08	□□□□□ -1.76
SPT6	YGR116W	FBP26	P32604	452 aa		4.08	□□□□□ -1.76
SPT6	YGR116W	MCX1	P38323	520 aa	Predicted RBP	4.08	□□□□□ -1.76
SPT6	YGR116W	NUR1	Q12066	484 aa		4.08	□□□□□ -1.76
SPT6	YGR116W	HEL1	P36113	551 aa		4.07	□□□□□ -1.76
SPT6	YGR116W	YMR124W	P39523	943 aa	Known RBP	4.07	□□□□□ -1.76
SPT6	YGR116W	CTI6	Q08923	506 aa		4.07	□□□□□ -1.76
SPT6	YGR116W	RPB2	P08518	1224 aa	Known RBP	4.07	□□□□□ -1.76
SPT6	YGR116W	CDC10	P25342	322 aa	Known RBP	4.07	□□□□□ -1.76
SPT6	YGR116W	RAD51	P25454	400 aa		4.07	□□□□□ -1.76
SPT6	YGR116W	PEP3	P27801	918 aa		4.07	□□□□□ -1.76
SPT6	YGR116W	OLA1	P38219	394 aa	Known RBP	4.07	□□□□□ -1.76
SPT6	YGR116W	SEC26	P41810	973 aa	Known RBP	4.07	□□□□□ -1.76
SPT6	YGR116W	BTN2	P53286	410 aa		4.07	□□□□□ -1.76
SPT6	YGR116W	UTP5	Q04177	643 aa	Known RBP	4.07	□□□□□ -1.76
SPT6	YGR116W	DIT2	P21595	489 aa		4.07	□□□□□ -1.76
SPT6	YGR116W	SEC9	P40357	651 aa		4.07	□□□□□ -1.76
SPT6	YGR116W	DUR1,2	P32528	1835 aa	Known RBP	4.07	□□□□□ -1.76
SPT6	YGR116W	UBP12	P39538	1254 aa		4.07	□□□□□ -1.76
SPT6	YGR116W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SPT6	YGR116W	YVC1	Q12324	675 aa		4.07	□□□□□ -1.76
SPT6	YGR116W	MTF2	P10849	440 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	PSY4	P38193	441 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	MAD1	P40957	749 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	YJR079W	P47126	109 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	STR2	P47164	639 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	ALO1	P54783	526 aa	Known RBP	4.06	□□□□□ -1.76
SPT6	YGR116W	YDR338C	Q05497	695 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	NOP6	Q07623	225 aa	Known RBP	4.06	□□□□□ -1.76
SPT6	YGR116W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SPT6	YGR116W	OPI1	P21957	404 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	CLB4	P24871	460 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	IMP2'	P32351	346 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	ECM32	P32644	1121 aa	Known RBP	4.06	□□□□□ -1.76
SPT6	YGR116W	MIF2	P35201	549 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	MIC19	P43594	170 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	SGM1	P47166	707 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	PRP16	P15938	1071 aa	Predicted RBP	4.06	□□□□□ -1.76
SPT6	YGR116W	GAL11	P19659	1081 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	YME2	P32843	850 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SPT6	YGR116W	RRP15	Q06511	250 aa	Predicted RBP	4.06	□□□□□ -1.76
SPT6	YGR116W	OPY2	Q06810	360 aa		4.06	□□□□□ -1.76
SPT6	YGR116W	SLK19	Q08581	821 aa	Known RBP	4.06	□□□□□ -1.76
SPT6	YGR116W	SSF2	Q12153	453 aa	Predicted RBP	4.06	□□□□□ -1.76
SPT6	YGR116W	CDC37	P06101	506 aa	Known RBP	4.05	□□□□□ -1.76
SPT6	YGR116W	MPH3	P0CE00	602 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	PMR1	P13586	950 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
SPT6	YGR116W	YLR287C	Q05881	355 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	YLR407W	Q06070	228 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	SDH5	Q08230	162 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	TMA16	Q08687	178 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	PGA3	Q12746	312 aa	Known RBP	4.05	□□□□□ -1.76
SPT6	YGR116W	NBL1	Q3E7Y6	73 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	YMR085W	P0CF18	432 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	MRD1	Q06106	887 aa	Known RBP	4.05	□□□□□ -1.76
SPT6	YGR116W	HMI1	Q12039	706 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	RRP6	Q12149	733 aa	Known RBP	4.05	□□□□□ -1.76
SPT6	YGR116W	TFC3	P34111	1160 aa		4.05	□□□□□ -1.76
SPT6	YGR116W	SEG2	P34250	1132 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms