RNA–Protein interactions for RNA: YGL197W

MDS3, Transcript of Putative component of the TOR regulatory pathway, yeastyeast

Gene MDS3, Length 4,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDS3YGL197W ELM1P32801 640 aa2.38□□□□□ -2.03
MDS3YGL197W KAE1P36132 386 aa2.38□□□□□ -2.03
MDS3YGL197W ISW1P38144 1129 aa2.38□□□□□ -2.03
MDS3YGL197W ALG14P38242 237 aa2.38□□□□□ -2.03
MDS3YGL197W FIR1P40020 876 aa2.38□□□□□ -2.03
MDS3YGL197W UTP7P40055 554 aaKnown RBP2.38□□□□□ -2.03
MDS3YGL197W YPL034WQ03083 165 aa2.38□□□□□ -2.03
MDS3YGL197W BNI1P41832 1953 aa2.38□□□□□ -2.03
MDS3YGL197W RPC31P17890 251 aa2.38□□□□□ -2.03
MDS3YGL197W ARL1P38116 183 aaKnown RBP2.38□□□□□ -2.03
MDS3YGL197W SRS2P12954 1174 aa2.38□□□□□ -2.03
MDS3YGL197W SSA4P22202 642 aaKnown RBP2.38□□□□□ -2.03
MDS3YGL197W GIP1P38229 639 aa2.38□□□□□ -2.03
MDS3YGL197W HAL5P38970 855 aaKnown RBP2.38□□□□□ -2.03
MDS3YGL197W TY1A-DR3Q12441 440 aa2.38□□□□□ -2.03
MDS3YGL197W SKI3P17883 1432 aaKnown RBP2.38□□□□□ -2.03
MDS3YGL197W SPT6P23615 1451 aaKnown RBP2.37□□□□□ -2.03
MDS3YGL197W PGM1P33401 570 aaKnown RBP2.37□□□□□ -2.03
MDS3YGL197W YJL007CP47080 104 aa2.37□□□□□ -2.03
MDS3YGL197W TIF1P10081 395 aaKnown RBP2.37□□□□□ -2.03
MDS3YGL197W YNL108CP53929 270 aa2.37□□□□□ -2.03
MDS3YGL197W SPO71Q03868 1245 aa2.37□□□□□ -2.03
MDS3YGL197W CHC1P22137 1653 aaKnown RBP2.37□□□□□ -2.03
MDS3YGL197W DNA2P38859 1522 aa2.37□□□□□ -2.03
MDS3YGL197W RPS31P05759 152 aaKnown RBP2.36□□□□□ -2.03
MDS3YGL197W BIM1P40013 344 aa2.36□□□□□ -2.03
MDS3YGL197W RPO31P04051 1460 aa2.36□□□□□ -2.03
MDS3YGL197W PRK1P40494 810 aa2.36□□□□□ -2.03
MDS3YGL197W ECL1P48235 211 aa2.36□□□□□ -2.03
MDS3YGL197W YDJ1P25491 409 aaKnown RBP2.36□□□□□ -2.03
MDS3YGL197W SHU2P38957 223 aa2.36□□□□□ -2.03
MDS3YGL197W NIT1P40447 199 aa2.36□□□□□ -2.03
MDS3YGL197W SHM1P37292 490 aaPredicted RBP2.36□□□□□ -2.03
MDS3YGL197W SAF1P38352 637 aa2.36□□□□□ -2.03
MDS3YGL197W HXT5P38695 592 aa2.36□□□□□ -2.03
MDS3YGL197W ALD2P47771 506 aa2.36□□□□□ -2.03
MDS3YGL197W BUD9P53226 547 aa2.36□□□□□ -2.03
MDS3YGL197W ENO1P00924 437 aaKnown RBP2.35□□□□□ -2.03
MDS3YGL197W MLF3P32047 452 aa2.35□□□□□ -2.03
MDS3YGL197W MSC7P38694 644 aa2.35□□□□□ -2.03
MDS3YGL197W MTO1P53070 669 aa2.35□□□□□ -2.03
MDS3YGL197W SOG2Q08817 791 aa2.35□□□□□ -2.03
MDS3YGL197W KOG1P38873 1557 aa2.35□□□□□ -2.03
MDS3YGL197W PDI1P17967 522 aaKnown RBP2.34□□□□□ -2.03
MDS3YGL197W RDS2P19541 446 aaKnown RBP2.34□□□□□ -2.03
MDS3YGL197W MRPL33P20084 86 aa2.34□□□□□ -2.03
MDS3YGL197W ISF1P32488 338 aa2.34□□□□□ -2.03
MDS3YGL197W PUB1P32588 453 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
MDS3YGL197W UFD2P54860 961 aa2.34□□□□□ -2.03
MDS3YGL197W CUS1Q02554 436 aaPredicted RBP2.34□□□□□ -2.03
MDS3YGL197W Q0182Q9ZZW1 134 aa2.34□□□□□ -2.03
MDS3YGL197W YOR093CQ12275 1648 aa2.34□□□□□ -2.03
MDS3YGL197W CHS2P14180 963 aa2.34□□□□□ -2.03
MDS3YGL197W PGM2P37012 569 aaKnown RBP2.34□□□□□ -2.03
MDS3YGL197W AMN1P38285 549 aaPredicted RBP2.34□□□□□ -2.03
MDS3YGL197W SPO74P45819 413 aa2.34□□□□□ -2.03
MDS3YGL197W MAE1P36013 669 aaKnown RBP2.34□□□□□ -2.03
MDS3YGL197W SNF2P22082 1703 aa2.34□□□□□ -2.04
MDS3YGL197W TY4B-PA0A0B7P3V8 1104 aa2.34□□□□□ -2.04
MDS3YGL197W GCV1P48015 400 aa2.34□□□□□ -2.04
MDS3YGL197W ACS2P52910 683 aaKnown RBP2.34□□□□□ -2.04
MDS3YGL197W PRP43P53131 767 aaKnown RBP2.34□□□□□ -2.04
MDS3YGL197W TY4A-HQ6Q5P6 413 aa2.34□□□□□ -2.04
MDS3YGL197W MMS22Q06164 1454 aa2.33□□□□□ -2.04
MDS3YGL197W DUR1,2P32528 1835 aaKnown RBP2.33□□□□□ -2.04
MDS3YGL197W VMR1P38735 1592 aa2.33□□□□□ -2.04
MDS3YGL197W TY4B-HP0C2J7 1802 aa2.33□□□□□ -2.04
MDS3YGL197W OMA1P36163 345 aa2.33□□□□□ -2.04
MDS3YGL197W GSF2Q04697 403 aaKnown RBP2.33□□□□□ -2.04
MDS3YGL197W YOR1P53049 1477 aa2.33□□□□□ -2.04
MDS3YGL197W NTA1P40354 457 aa2.33□□□□□ -2.04
MDS3YGL197W SBE2P42223 864 aaKnown RBP2.33□□□□□ -2.04
MDS3YGL197W FUS1P11710 512 aa2.32□□□□□ -2.04
MDS3YGL197W PKC1P24583 1151 aa2.32□□□□□ -2.04
MDS3YGL197W TTI1P36097 1038 aa2.32□□□□□ -2.04
MDS3YGL197W TGL4P36165 910 aa2.32□□□□□ -2.04
MDS3YGL197W RPP2AP05319 106 aaKnown RBP2.32□□□□□ -2.04
MDS3YGL197W TAF13P11747 167 aa2.32□□□□□ -2.04
MDS3YGL197W NAR1P23503 491 aaKnown RBP2.32□□□□□ -2.04
MDS3YGL197W RRM3P38766 723 aa2.32□□□□□ -2.04
MDS3YGL197W AIM46P38885 310 aa2.32□□□□□ -2.04
MDS3YGL197W QDR2P40474 542 aa2.32□□□□□ -2.04
MDS3YGL197W YCK2P23292 546 aaKnown RBP2.32□□□□□ -2.04
MDS3YGL197W MDJ1P35191 511 aa2.32□□□□□ -2.04
MDS3YGL197W IRS4P36115 615 aaKnown RBP2.32□□□□□ -2.04
MDS3YGL197W HXT8P40886 569 aa2.32□□□□□ -2.04
MDS3YGL197W INP52P50942 1183 aa2.32□□□□□ -2.04
MDS3YGL197W ATG32P40458 529 aa2.32□□□□□ -2.04
MDS3YGL197W KRI1P42846 591 aaKnown RBP2.32□□□□□ -2.04
MDS3YGL197W ORC3P54790 616 aa2.32□□□□□ -2.04
MDS3YGL197W RLF2Q12495 606 aa2.32□□□□□ -2.04
MDS3YGL197W DNF3Q12674 1656 aa2.32□□□□□ -2.04
MDS3YGL197W IDI1P15496 288 aa2.31□□□□□ -2.04
MDS3YGL197W VMA3P25515 160 aa2.31□□□□□ -2.04
MDS3YGL197W GIP2P40036 548 aa2.31□□□□□ -2.04
MDS3YGL197W YIL165CP40446 119 aa2.31□□□□□ -2.04
MDS3YGL197W CIT3P43635 486 aa2.31□□□□□ -2.04
MDS3YGL197W APC11Q12157 165 aa2.31□□□□□ -2.04
MDS3YGL197W LSO1Q3E827 93 aa2.31□□□□□ -2.04
MDS3YGL197W ARO1P08566 1588 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms