RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W SFA1P32771 386 aa6.42□□□□□ -1.38
PRE1YER012W FUS1P11710 512 aa6.41□□□□□ -1.38
PRE1YER012W NAM7P30771 971 aaKnown RBP6.41□□□□□ -1.38
PRE1YER012W PGM1P33401 570 aaKnown RBP6.41□□□□□ -1.38
PRE1YER012W MAC1P35192 417 aa6.41□□□□□ -1.38
PRE1YER012W YBR287WP38355 427 aa6.41□□□□□ -1.38
PRE1YER012W IRS4P36115 615 aaKnown RBP6.4□□□□□ -1.38
PRE1YER012W AKR1P39010 764 aa6.4□□□□□ -1.38
PRE1YER012W RSC6P25632 483 aa6.39□□□□□ -1.39
PRE1YER012W PYC2P32327 1180 aaKnown RBP6.39□□□□□ -1.39
PRE1YER012W COQ2P32378 372 aa6.39□□□□□ -1.39
PRE1YER012W SMC1P32908 1225 aa6.39□□□□□ -1.39
PRE1YER012W OMA1P36163 345 aa6.39□□□□□ -1.39
PRE1YER012W QDR1P40475 563 aa6.39□□□□□ -1.39
PRE1YER012W NEO1P40527 1151 aa6.39□□□□□ -1.39
PRE1YER012W YJR124CP47159 448 aa6.39□□□□□ -1.39
PRE1YER012W SOG2Q08817 791 aa6.39□□□□□ -1.39
PRE1YER012W YNR065CP53751 1116 aa6.38□□□□□ -1.39
PRE1YER012W DSE4P53753 1117 aa6.38□□□□□ -1.39
PRE1YER012W TRP3P00937 484 aa6.37□□□□□ -1.39
PRE1YER012W POL5P39985 1022 aaKnown RBP6.37□□□□□ -1.39
PRE1YER012W GUP1P53154 560 aa6.36□□□□□ -1.39
PRE1YER012W REC8Q12188 680 aa6.36□□□□□ -1.39
PRE1YER012W YLR122CQ12312 125 aa6.36□□□□□ -1.39
PRE1YER012W GLO4Q12320 285 aa6.36□□□□□ -1.39
PRE1YER012W ERS1P17261 260 aa6.35□□□□□ -1.39
PRE1YER012W YKR073CP36153 106 aa6.35□□□□□ -1.39
PRE1YER012W CTR9P89105 1077 aa6.35□□□□□ -1.39
PRE1YER012W COBP00163 385 aa6.34□□□□□ -1.39
PRE1YER012W KAE1P36132 386 aa6.34□□□□□ -1.39
PRE1YER012W INP52P50942 1183 aa6.34□□□□□ -1.39
PRE1YER012W HAS1Q03532 505 aaKnown RBP6.34□□□□□ -1.39
PRE1YER012W SSA1P10591 642 aaKnown RBP6.33□□□□□ -1.4
PRE1YER012W MAE1P36013 669 aaKnown RBP6.33□□□□□ -1.4
PRE1YER012W YGR130CP53278 816 aa6.33□□□□□ -1.4
PRE1YER012W SPO71Q03868 1245 aa6.33□□□□□ -1.4
PRE1YER012W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
PRE1YER012W ELG1Q12050 791 aa6.33□□□□□ -1.4
PRE1YER012W SAF1P38352 637 aa6.32□□□□□ -1.4
PRE1YER012W KIP3P53086 805 aaKnown RBP6.32□□□□□ -1.4
PRE1YER012W HVG1P0CE11 249 aa6.31□□□□□ -1.4
PRE1YER012W DUR3P33413 735 aa6.31□□□□□ -1.4
PRE1YER012W CHS2P14180 963 aa6.3□□□□□ -1.4
PRE1YER012W GRS1P38088 690 aaKnown RBP6.3□□□□□ -1.4
PRE1YER012W FET4P40988 552 aa6.3□□□□□ -1.4
PRE1YER012W LEM3P42838 414 aa6.3□□□□□ -1.4
PRE1YER012W ATG1P53104 897 aa6.3□□□□□ -1.4
PRE1YER012W NCE103P53615 221 aa6.3□□□□□ -1.4
PRE1YER012W TOS1P38288 455 aa6.29□□□□□ -1.4
PRE1YER012W MED7Q08278 222 aa6.29□□□□□ -1.4
PRE1YER012W TRL1P09880 827 aaKnown RBP6.28□□□□□ -1.4
PRE1YER012W LIP5P32875 414 aa6.28□□□□□ -1.4
PRE1YER012W ERP5P38819 212 aa6.28□□□□□ -1.4
PRE1YER012W UFD2P54860 961 aa6.28□□□□□ -1.4
PRE1YER012W YMR074CQ04773 145 aa6.28□□□□□ -1.4
PRE1YER012W RSC4Q02206 625 aa6.27□□□□□ -1.41
PRE1YER012W MNL2Q12205 849 aa6.27□□□□□ -1.41
PRE1YER012W ECM2P38241 364 aaKnown RBP6.26□□□□□ -1.41
PRE1YER012W TRS120Q04183 1289 aa6.26□□□□□ -1.41
PRE1YER012W HAT1Q12341 374 aa6.26□□□□□ -1.41
PRE1YER012W CDC3P32457 520 aaKnown RBP6.25□□□□□ -1.41
PRE1YER012W ACF4P47129 309 aa6.25□□□□□ -1.41
PRE1YER012W CTH1P47976 325 aa6.25□□□□□ -1.41
PRE1YER012W YBL113CQ7M4S9 792 aa6.25□□□□□ -1.41
PRE1YER012W FRT1Q99332 602 aa6.25□□□□□ -1.41
PRE1YER012W CYC7P00045 113 aa6.24□□□□□ -1.41
PRE1YER012W NPR1P22211 790 aa6.24□□□□□ -1.41
PRE1YER012W YHL008CP38750 627 aa6.24□□□□□ -1.41
PRE1YER012W MDJ2P42834 146 aa6.24□□□□□ -1.41
PRE1YER012W YNL011CP53980 444 aa6.24□□□□□ -1.41
PRE1YER012W CMR1Q12510 522 aaKnown RBP6.24□□□□□ -1.41
PRE1YER012W GEF1P37020 779 aa6.23□□□□□ -1.41
PRE1YER012W SEA4P38164 1038 aa6.22□□□□□ -1.41
PRE1YER012W RIM11P38615 370 aa6.22□□□□□ -1.41
PRE1YER012W SDH1Q00711 640 aa6.22□□□□□ -1.41
PRE1YER012W BSC2Q05611 235 aa6.22□□□□□ -1.41
PRE1YER012W GIC2Q06648 383 aa6.22□□□□□ -1.41
PRE1YER012W GPI13Q07830 1017 aa6.22□□□□□ -1.41
PRE1YER012W GPT2P36148 743 aa6.21□□□□□ -1.42
PRE1YER012W SPO74P45819 413 aa6.21□□□□□ -1.42
PRE1YER012W FAR11P53917 953 aa6.21□□□□□ -1.42
PRE1YER012W NUT2Q06213 157 aa6.21□□□□□ -1.42
PRE1YER012W BRE4Q07660 1125 aa6.21□□□□□ -1.42
PRE1YER012W INP54Q08227 384 aaKnown RBP6.21□□□□□ -1.42
PRE1YER012W ALG6Q12001 544 aaKnown RBP6.21□□□□□ -1.42
PRE1YER012W PUB1P32588 453 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42 RIP-Chip
PRE1YER012W YOR223WQ12015 292 aa6.2□□□□□ -1.42
PRE1YER012W HTS1P07263 546 aaKnown RBP6.19□□□□□ -1.42
PRE1YER012W WHI3P34761 661 aaKnown RBP6.19□□□□□ -1.42
PRE1YER012W AVT1P47082 602 aa6.19□□□□□ -1.42
PRE1YER012W MON1P53129 644 aa6.19□□□□□ -1.42
PRE1YER012W CDC55Q00362 526 aa6.19□□□□□ -1.42
PRE1YER012W FLP1P03870 423 aa6.18□□□□□ -1.42
PRE1YER012W GCD1P09032 578 aaPredicted RBP6.18□□□□□ -1.42
PRE1YER012W DOT1Q04089 582 aaKnown RBP6.18□□□□□ -1.42
PRE1YER012W MAG2Q06436 670 aaKnown RBP6.18□□□□□ -1.42
PRE1YER012W MSB1P21339 1137 aaKnown RBP6.17□□□□□ -1.42
PRE1YER012W NUT1P53114 1132 aa6.16□□□□□ -1.42
PRE1YER012W MSH6Q03834 1242 aa6.16□□□□□ -1.42
PRE1YER012W YIG1Q08956 461 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms