RNA–Protein interactions for RNA: YDR510W

SMT3, Transcript of Ubiquitin-like protein of the SUMO family, yeast

Gene SMT3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMT3	YDR510W	CEF1	Q03654	590 aa	Predicted RBP	4.07	□□□□□ -1.76
SMT3	YDR510W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SMT3	YDR510W	SPO75	Q07798	868 aa		4.07	□□□□□ -1.76
SMT3	YDR510W	RTT10	Q08924	1013 aa		4.07	□□□□□ -1.76
SMT3	YDR510W	OSH2	Q12451	1283 aa		4.07	□□□□□ -1.76
SMT3	YDR510W	CAN1	P04817	590 aa		4.06	□□□□□ -1.76
SMT3	YDR510W	GCR1	P07261	785 aa		4.06	□□□□□ -1.76
SMT3	YDR510W	MOD5	P07884	428 aa		4.06	□□□□□ -1.76
SMT3	YDR510W	KAR2	P16474	682 aa	Known RBP	4.06	□□□□□ -1.76
SMT3	YDR510W	RPL8A	P17076	256 aa	Known RBP	4.06	□□□□□ -1.76
SMT3	YDR510W	VMA4	P22203	233 aa	Known RBP	4.06	□□□□□ -1.76
SMT3	YDR510W	FBP26	P32604	452 aa		4.06	□□□□□ -1.76
SMT3	YDR510W	STE5	P32917	917 aa		4.06	□□□□□ -1.76
SMT3	YDR510W	LDH1	P38139	375 aa		4.06	□□□□□ -1.76
SMT3	YDR510W	YBR184W	P38299	523 aa		4.06	□□□□□ -1.76
SMT3	YDR510W	RGD2	P43556	714 aa		4.06	□□□□□ -1.76
SMT3	YDR510W	EEB1	Q02891	456 aa		4.06	□□□□□ -1.76
SMT3	YDR510W	TMA64	Q04600	565 aa	Known RBP	4.06	□□□□□ -1.76
SMT3	YDR510W	YPQ2	Q06328	317 aa		4.06	□□□□□ -1.76
SMT3	YDR510W	NTG2	Q08214	380 aa		4.06	□□□□□ -1.76
SMT3	YDR510W	TIF6	Q12522	245 aa	Known RBP	4.06	□□□□□ -1.76
SMT3	YDR510W	CIT1	P00890	479 aa		4.05	□□□□□ -1.76
SMT3	YDR510W	FLP1	P03870	423 aa		4.05	□□□□□ -1.76
SMT3	YDR510W	HSP60	P19882	572 aa	Known RBP	4.05	□□□□□ -1.76
SMT3	YDR510W	MSH2	P25847	964 aa		4.05	□□□□□ -1.76
SMT3	YDR510W	RPL8B	P29453	256 aa	Known RBP	4.05	□□□□□ -1.76
SMT3	YDR510W	SPT16	P32558	1035 aa	Known RBP	4.05	□□□□□ -1.76
SMT3	YDR510W	MKS1	P34072	584 aa		4.05	□□□□□ -1.76
SMT3	YDR510W	IRS4	P36115	615 aa	Known RBP	4.05	□□□□□ -1.76
SMT3	YDR510W	TIF11	P38912	153 aa	Known RBP	4.05	□□□□□ -1.76
SMT3	YDR510W	BOI2	P39969	1040 aa		4.05	□□□□□ -1.76
SMT3	YDR510W	PIC2	P40035	300 aa		4.05	□□□□□ -1.76
SMT3	YDR510W	PSY2	P40164	858 aa		4.05	□□□□□ -1.76
SMT3	YDR510W	NTA1	P40354	457 aa		4.05	□□□□□ -1.76
SMT3	YDR510W	ULP1	Q02724	621 aa		4.05	□□□□□ -1.76
SMT3	YDR510W	ADI1	Q03677	179 aa		4.05	□□□□□ -1.76
SMT3	YDR510W	FMP25	Q08023	583 aa		4.05	□□□□□ -1.76
SMT3	YDR510W	WTM2	Q12206	467 aa		4.05	□□□□□ -1.76
SMT3	YDR510W	THS1	P04801	734 aa	Known RBP	4.04	□□□□□ -1.76
SMT3	YDR510W	RPA135	P22138	1203 aa	Known RBP	4.04	□□□□□ -1.76
SMT3	YDR510W	TRX2	P22803	104 aa	Known RBP	4.04	□□□□□ -1.76
SMT3	YDR510W	SFP1	P32432	683 aa		4.04	□□□□□ -1.76
SMT3	YDR510W	DYS1	P38791	387 aa		4.04	□□□□□ -1.76
SMT3	YDR510W	ERP2	P39704	215 aa		4.04	□□□□□ -1.76
SMT3	YDR510W	FIR1	P40020	876 aa		4.04	□□□□□ -1.76
SMT3	YDR510W	SPO20	Q04359	397 aa		4.04	□□□□□ -1.76
SMT3	YDR510W	ESC2	Q06340	456 aa		4.04	□□□□□ -1.76
SMT3	YDR510W	UTP4	Q06679	776 aa	Known RBP	4.04	□□□□□ -1.76
SMT3	YDR510W	MRL1	Q06815	381 aa		4.04	□□□□□ -1.76
SMT3	YDR510W	YOR378W	Q08902	515 aa		4.04	□□□□□ -1.76
SMT3	YDR510W	TMA46	Q12000	345 aa	Known RBP	4.04	□□□□□ -1.76
SMT3	YDR510W	IOC2	Q12072	812 aa		4.04	□□□□□ -1.76
SMT3	YDR510W	NKP1	Q12493	238 aa		4.04	□□□□□ -1.76
SMT3	YDR510W	TMA17	Q12513	150 aa		4.04	□□□□□ -1.76
SMT3	YDR510W	MSN1	P22148	382 aa		4.03	□□□□□ -1.76
SMT3	YDR510W	DPB3	P27344	201 aa		4.03	□□□□□ -1.76
SMT3	YDR510W	RTG1	P32607	177 aa		4.03	□□□□□ -1.76
SMT3	YDR510W	SEC61	P32915	480 aa		4.03	□□□□□ -1.76
SMT3	YDR510W	MRP8	P35719	219 aa		4.03	□□□□□ -1.76
SMT3	YDR510W	UTP7	P40055	554 aa	Known RBP	4.03	□□□□□ -1.76
SMT3	YDR510W	ARH1	P48360	493 aa		4.03	□□□□□ -1.76
SMT3	YDR510W	YGR237C	P50089	785 aa		4.03	□□□□□ -1.76
SMT3	YDR510W	RTA1	P53047	317 aa		4.03	□□□□□ -1.76
SMT3	YDR510W	ERP6	P53198	216 aa		4.03	□□□□□ -1.76
SMT3	YDR510W	BNI4	P53858	892 aa		4.03	□□□□□ -1.76
SMT3	YDR510W	KRE33	P53914	1056 aa	Known RBP	4.03	□□□□□ -1.76
SMT3	YDR510W	TFB2	Q02939	513 aa		4.03	□□□□□ -1.76
SMT3	YDR510W	VMS1	Q04311	632 aa	Known RBP	4.03	□□□□□ -1.76
SMT3	YDR510W	ATG13	Q06628	738 aa		4.03	□□□□□ -1.76
SMT3	YDR510W	BRE1	Q07457	700 aa	Known RBP	4.03	□□□□□ -1.76
SMT3	YDR510W	YPR015C	Q12531	247 aa		4.03	□□□□□ -1.76
SMT3	YDR510W	RPP2B	P02400	110 aa	Known RBP	4.02	□□□□□ -1.77
SMT3	YDR510W	SBP1	P10080	294 aa	Known RBP	4.02	□□□□□ -1.77
SMT3	YDR510W	STE6	P12866	1290 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	AGP1	P25376	633 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	ARE1	P25628	610 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	CDC11	P32458	415 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	SNF7	P39929	240 aa	Known RBP	4.02	□□□□□ -1.77
SMT3	YDR510W	QDR2	P40474	542 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	IRR1	P40541	1150 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	XKS1	P42826	600 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	VNX1	P42839	908 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	HLJ1	P48353	224 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	GNP1	P48813	663 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	MON1	P53129	644 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	TAF8	Q03750	510 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	SHE9	Q04172	456 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	EAF1	Q06337	982 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	YDL129W	Q07555	291 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	SLX4	Q12098	748 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	YBL029C-A	Q3E756	94 aa		4.02	□□□□□ -1.77
SMT3	YDR510W	NUP145	P49687	1317 aa		4.01	□□□□□ -1.77
SMT3	YDR510W	COB	P00163	385 aa		4.01	□□□□□ -1.77
SMT3	YDR510W	TRP2	P00899	507 aa	Known RBP	4.01	□□□□□ -1.77
SMT3	YDR510W	SBA1	P28707	216 aa	Known RBP	4.01	□□□□□ -1.77
SMT3	YDR510W	ABD1	P32783	436 aa	Predicted RBP	4.01	□□□□□ -1.77
SMT3	YDR510W	SEA4	P38164	1038 aa		4.01	□□□□□ -1.77
SMT3	YDR510W	NIT1	P40447	199 aa		4.01	□□□□□ -1.77
SMT3	YDR510W	HUL4	P40985	892 aa		4.01	□□□□□ -1.77
SMT3	YDR510W	KRI1	P42846	591 aa	Known RBP	4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 66.6 ms