RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W MSN1P22148 382 aa6.81□□□□□ -1.32
RPN9YDR427W ISC10P32645 267 aa6.81□□□□□ -1.32
RPN9YDR427W FIR1P40020 876 aa6.81□□□□□ -1.32
RPN9YDR427W SOG2Q08817 791 aa6.81□□□□□ -1.32
RPN9YDR427W ALD4P46367 519 aaKnown RBP6.8□□□□□ -1.32
RPN9YDR427W BIO5P53744 561 aaKnown RBP6.8□□□□□ -1.32
RPN9YDR427W CPS1P27614 576 aa6.79□□□□□ -1.32
RPN9YDR427W UBP5P39944 805 aa6.79□□□□□ -1.32
RPN9YDR427W SPO71Q03868 1245 aa6.79□□□□□ -1.32
RPN9YDR427W POL5P39985 1022 aaKnown RBP6.78□□□□□ -1.32
RPN9YDR427W NCE103P53615 221 aa6.78□□□□□ -1.32
RPN9YDR427W PUF6Q04373 656 aaKnown RBP6.78□□□□□ -1.32
RPN9YDR427W EMG1Q06287 252 aaKnown RBP6.78□□□□□ -1.32
RPN9YDR427W FUS1P11710 512 aa6.76□□□□□ -1.33
RPN9YDR427W AIM46P38885 310 aa6.76□□□□□ -1.33
RPN9YDR427W PUN1Q06991 263 aa6.76□□□□□ -1.33
RPN9YDR427W ELG1Q12050 791 aa6.76□□□□□ -1.33
RPN9YDR427W PUP1P25043 261 aa6.75□□□□□ -1.33
RPN9YDR427W ALD3P54114 506 aa6.75□□□□□ -1.33
RPN9YDR427W TFA2P36145 328 aa6.74□□□□□ -1.33
RPN9YDR427W HXT8P40886 569 aa6.74□□□□□ -1.33
RPN9YDR427W RNQ1P25367 405 aa6.73□□□□□ -1.33
RPN9YDR427W GIC2Q06648 383 aa6.73□□□□□ -1.33
RPN9YDR427W NEO1P40527 1151 aa6.72□□□□□ -1.33
RPN9YDR427W SDH1Q00711 640 aa6.72□□□□□ -1.33
RPN9YDR427W SRS2P12954 1174 aa6.71□□□□□ -1.34
RPN9YDR427W ECL1P48235 211 aa6.71□□□□□ -1.34
RPN9YDR427W NSI1Q12457 570 aa6.71□□□□□ -1.34
RPN9YDR427W NIT1P40447 199 aa6.7□□□□□ -1.34
RPN9YDR427W SSA4P22202 642 aaKnown RBP6.69□□□□□ -1.34
RPN9YDR427W SEG2P34250 1132 aa6.69□□□□□ -1.34
RPN9YDR427W POL12P38121 705 aaPredicted RBP6.69□□□□□ -1.34
RPN9YDR427W KIP3P53086 805 aaKnown RBP6.69□□□□□ -1.34
RPN9YDR427W FAR11P53917 953 aa6.69□□□□□ -1.34
RPN9YDR427W ERS1P17261 260 aa6.68□□□□□ -1.34
RPN9YDR427W LRG1P35688 1017 aa6.68□□□□□ -1.34
RPN9YDR427W BOI1P38041 980 aaKnown RBP6.68□□□□□ -1.34
RPN9YDR427W SUB2Q07478 446 aaKnown RBP6.68□□□□□ -1.34
RPN9YDR427W SEA4P38164 1038 aa6.67□□□□□ -1.34
RPN9YDR427W YJR124CP47159 448 aa6.67□□□□□ -1.34
RPN9YDR427W YNR065CP53751 1116 aa6.67□□□□□ -1.34
RPN9YDR427W NTA1P40354 457 aa6.66□□□□□ -1.34
RPN9YDR427W MMM1P41800 426 aa6.66□□□□□ -1.34
RPN9YDR427W RGD2P43556 714 aa6.66□□□□□ -1.34
RPN9YDR427W PRP43P53131 767 aaKnown RBP6.66□□□□□ -1.34
RPN9YDR427W YML083CQ04526 418 aa6.66□□□□□ -1.34
RPN9YDR427W NOB1Q08444 459 aaKnown RBP6.66□□□□□ -1.34
RPN9YDR427W DFG16Q99234 619 aa6.66□□□□□ -1.34
RPN9YDR427W GCD1P09032 578 aaPredicted RBP6.65□□□□□ -1.34
RPN9YDR427W RRN6P32786 894 aa6.65□□□□□ -1.34
RPN9YDR427W HAS1Q03532 505 aaKnown RBP6.65□□□□□ -1.34
RPN9YDR427W CIT3P43635 486 aa6.64□□□□□ -1.35
RPN9YDR427W YOR223WQ12015 292 aa6.64□□□□□ -1.35
RPN9YDR427W FET4P40988 552 aa6.63□□□□□ -1.35
RPN9YDR427W SUT1P53032 299 aaKnown RBP6.63□□□□□ -1.35
RPN9YDR427W YMR074CQ04773 145 aa6.63□□□□□ -1.35
RPN9YDR427W HVG1P0CE11 249 aa6.62□□□□□ -1.35
RPN9YDR427W YKL222CP35995 705 aa6.62□□□□□ -1.35
RPN9YDR427W RAD55P38953 406 aa6.62□□□□□ -1.35
RPN9YDR427W YOR059CQ08448 450 aaKnown RBP6.62□□□□□ -1.35
RPN9YDR427W IRS4P36115 615 aaKnown RBP6.61□□□□□ -1.35
RPN9YDR427W CWC15Q03772 175 aaKnown RBP6.61□□□□□ -1.35
RPN9YDR427W APC11Q12157 165 aa6.61□□□□□ -1.35
RPN9YDR427W YLL054CQ12244 843 aa6.61□□□□□ -1.35
RPN9YDR427W GLO4Q12320 285 aa6.61□□□□□ -1.35
RPN9YDR427W GAS1P22146 559 aaKnown RBP6.6□□□□□ -1.35
RPN9YDR427W YCR015CP25616 317 aa6.6□□□□□ -1.35
RPN9YDR427W SMC1P32908 1225 aa6.6□□□□□ -1.35
RPN9YDR427W TIF6Q12522 245 aaKnown RBP6.6□□□□□ -1.35
RPN9YDR427W PNP1Q05788 311 aa6.59□□□□□ -1.35
RPN9YDR427W WHI3P34761 661 aaKnown RBP6.58□□□□□ -1.36
RPN9YDR427W PSY2P40164 858 aa6.58□□□□□ -1.36
RPN9YDR427W KTR2P33550 425 aa6.57□□□□□ -1.36
RPN9YDR427W GPT2P36148 743 aa6.57□□□□□ -1.36
RPN9YDR427W RCM1P53972 490 aa6.57□□□□□ -1.36
RPN9YDR427W PYC2P32327 1180 aaKnown RBP6.56□□□□□ -1.36
RPN9YDR427W YHL008CP38750 627 aa6.56□□□□□ -1.36
RPN9YDR427W HSP78P33416 811 aa6.55□□□□□ -1.36
RPN9YDR427W ESC8Q08119 714 aa6.55□□□□□ -1.36
RPN9YDR427W SSA1P10591 642 aaKnown RBP6.54□□□□□ -1.36
RPN9YDR427W GCV1P48015 400 aa6.54□□□□□ -1.36
RPN9YDR427W DOT1Q04089 582 aaKnown RBP6.54□□□□□ -1.36
RPN9YDR427W RPB10P22139 70 aa6.53□□□□□ -1.36
RPN9YDR427W LSO1Q3E827 93 aa6.52□□□□□ -1.37
RPN9YDR427W OYE3P41816 400 aaPredicted RBP6.51□□□□□ -1.37
RPN9YDR427W FUR4P05316 633 aaKnown RBP6.5□□□□□ -1.37
RPN9YDR427W ADP1P25371 1049 aa6.5□□□□□ -1.37
RPN9YDR427W GEF1P37020 779 aa6.5□□□□□ -1.37
RPN9YDR427W CDA2Q06703 312 aa6.5□□□□□ -1.37
RPN9YDR427W YIG1Q08956 461 aa6.5□□□□□ -1.37
RPN9YDR427W RPS4AP0CX35 261 aaKnown RBP6.48□□□□□ -1.37
RPN9YDR427W RPS4BP0CX36 261 aaKnown RBP6.48□□□□□ -1.37
RPN9YDR427W TSA1P34760 196 aaKnown RBP6.48□□□□□ -1.37
RPN9YDR427W GIP4P39732 760 aa6.47□□□□□ -1.37
RPN9YDR427W ECM2P38241 364 aaKnown RBP6.46□□□□□ -1.38
RPN9YDR427W ORC3P54790 616 aa6.46□□□□□ -1.38
RPN9YDR427W RPL34AP87262 121 aaPredicted RBP6.45□□□□□ -1.38
RPN9YDR427W TRE1Q08919 783 aa6.45□□□□□ -1.38
RPN9YDR427W BOL3P39724 118 aa6.44□□□□□ -1.38
RPN9YDR427W TAF1P46677 1066 aa6.44□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms