RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A ERS1P17261 260 aa3.78□□□□□ -1.8
SDH6YDR379C-A RCM1P53972 490 aa3.78□□□□□ -1.8
SDH6YDR379C-A ABZ1P37254 787 aaPredicted RBP3.77□□□□□ -1.81
SDH6YDR379C-A AIM3P38266 947 aaKnown RBP3.77□□□□□ -1.81
SDH6YDR379C-A DYS1P38791 387 aa3.77□□□□□ -1.81
SDH6YDR379C-A YIL165CP40446 119 aa3.77□□□□□ -1.81
SDH6YDR379C-A ACS2P52910 683 aaKnown RBP3.77□□□□□ -1.81
SDH6YDR379C-A BIO5P53744 561 aaKnown RBP3.77□□□□□ -1.81
SDH6YDR379C-A SOG2Q08817 791 aa3.77□□□□□ -1.81
SDH6YDR379C-A VMA3P25515 160 aa3.75□□□□□ -1.81
SDH6YDR379C-A TFA2P36145 328 aa3.75□□□□□ -1.81
SDH6YDR379C-A MRX10Q05648 414 aa3.75□□□□□ -1.81
SDH6YDR379C-A YOR059CQ08448 450 aaKnown RBP3.75□□□□□ -1.81
SDH6YDR379C-A PNS1Q12412 539 aa3.75□□□□□ -1.81
SDH6YDR379C-A ADP1P25371 1049 aa3.74□□□□□ -1.81
SDH6YDR379C-A GAS4Q08271 471 aa3.74□□□□□ -1.81
SDH6YDR379C-A ENO1P00924 437 aaKnown RBP3.73□□□□□ -1.81
SDH6YDR379C-A PHO87P25360 923 aa3.73□□□□□ -1.81
SDH6YDR379C-A ISW1P38144 1129 aa3.73□□□□□ -1.81
SDH6YDR379C-A NEO1P40527 1151 aa3.73□□□□□ -1.81
SDH6YDR379C-A OYE3P41816 400 aaPredicted RBP3.73□□□□□ -1.81
SDH6YDR379C-A YML122CQ03207 126 aa3.73□□□□□ -1.81
SDH6YDR379C-A HAP4P14064 554 aa3.72□□□□□ -1.81
SDH6YDR379C-A GPT2P36148 743 aa3.72□□□□□ -1.81
SDH6YDR379C-A RIM8P53179 542 aa3.72□□□□□ -1.81
SDH6YDR379C-A ALD3P54114 506 aa3.72□□□□□ -1.81
SDH6YDR379C-A TUB2P02557 457 aaKnown RBP3.71□□□□□ -1.82
SDH6YDR379C-A LDH1P38139 375 aa3.71□□□□□ -1.82
SDH6YDR379C-A FAR11P53917 953 aa3.71□□□□□ -1.82
SDH6YDR379C-A ORC3P54790 616 aa3.71□□□□□ -1.82
SDH6YDR379C-A MRPL33P20084 86 aa3.7□□□□□ -1.82
SDH6YDR379C-A BOI1P38041 980 aaKnown RBP3.7□□□□□ -1.82
SDH6YDR379C-A KTR7P40504 517 aa3.7□□□□□ -1.82
SDH6YDR379C-A SSY1Q03770 852 aa3.7□□□□□ -1.82
SDH6YDR379C-A YOR223WQ12015 292 aa3.7□□□□□ -1.82
SDH6YDR379C-A PEP12P32854 288 aa3.69□□□□□ -1.82
SDH6YDR379C-A TOD6P34219 525 aa3.69□□□□□ -1.82
SDH6YDR379C-A CWH41P53008 833 aa3.69□□□□□ -1.82
SDH6YDR379C-A MRPL22P53881 309 aa3.69□□□□□ -1.82
SDH6YDR379C-A CAB1Q04430 367 aa3.69□□□□□ -1.82
SDH6YDR379C-A FUS1P11710 512 aa3.68□□□□□ -1.82
SDH6YDR379C-A YMR074CQ04773 145 aa3.68□□□□□ -1.82
SDH6YDR379C-A EMG1Q06287 252 aaKnown RBP3.68□□□□□ -1.82
SDH6YDR379C-A SHM2P37291 469 aaKnown RBP3.67□□□□□ -1.82
SDH6YDR379C-A FOX2Q02207 900 aaKnown RBP3.67□□□□□ -1.82
SDH6YDR379C-A VAN1P23642 535 aa3.66□□□□□ -1.82
SDH6YDR379C-A YJL007CP47080 104 aa3.66□□□□□ -1.82
SDH6YDR379C-A YJR124CP47159 448 aa3.66□□□□□ -1.82
SDH6YDR379C-A ROM1P53046 1155 aa3.66□□□□□ -1.82
SDH6YDR379C-A HAS1Q03532 505 aaKnown RBP3.66□□□□□ -1.82
SDH6YDR379C-A MSN1P22148 382 aa3.65□□□□□ -1.83
SDH6YDR379C-A TRE1Q08919 783 aa3.65□□□□□ -1.83
SDH6YDR379C-A LPX1Q12405 387 aaKnown RBP3.65□□□□□ -1.83
SDH6YDR379C-A SOD2P00447 233 aa3.64□□□□□ -1.83
SDH6YDR379C-A DOT1Q04089 582 aaKnown RBP3.64□□□□□ -1.83
SDH6YDR379C-A RPS4AP0CX35 261 aaKnown RBP3.63□□□□□ -1.83
SDH6YDR379C-A RPS4BP0CX36 261 aaKnown RBP3.63□□□□□ -1.83
SDH6YDR379C-A PRO1P32264 428 aa3.63□□□□□ -1.83
SDH6YDR379C-A YBR287WP38355 427 aa3.63□□□□□ -1.83
SDH6YDR379C-A CLU1Q03690 1277 aaKnown RBP3.63□□□□□ -1.83
SDH6YDR379C-A YPL277CQ08989 487 aa3.63□□□□□ -1.83
SDH6YDR379C-A YDL177CQ12257 170 aa3.63□□□□□ -1.83
SDH6YDR379C-A CTS1P29029 562 aa3.62□□□□□ -1.83
SDH6YDR379C-A SUV3P32580 737 aa3.62□□□□□ -1.83
SDH6YDR379C-A RTG2P32608 588 aaKnown RBP3.62□□□□□ -1.83
SDH6YDR379C-A AIM46P38885 310 aa3.62□□□□□ -1.83
SDH6YDR379C-A TRS33Q99394 268 aa3.62□□□□□ -1.83
SDH6YDR379C-A YLR358CO13565 187 aa3.6□□□□□ -1.83
SDH6YDR379C-A RPS13P05756 151 aaKnown RBP3.6□□□□□ -1.83
SDH6YDR379C-A YBR197CP38306 217 aa3.6□□□□□ -1.83
SDH6YDR379C-A PEX7P39108 375 aa3.6□□□□□ -1.83
SDH6YDR379C-A HVG1P0CE11 249 aa3.59□□□□□ -1.83
SDH6YDR379C-A FIR1P40020 876 aa3.59□□□□□ -1.83
SDH6YDR379C-A EAR1Q03212 550 aa3.59□□□□□ -1.83
SDH6YDR379C-A YLL054CQ12244 843 aa3.59□□□□□ -1.83
SDH6YDR379C-A TIF1P10081 395 aaKnown RBP3.58□□□□□ -1.84
SDH6YDR379C-A ETP1P38748 585 aaKnown RBP3.58□□□□□ -1.84
SDH6YDR379C-A PTC7P38797 343 aa3.58□□□□□ -1.84
SDH6YDR379C-A FET4P40988 552 aa3.58□□□□□ -1.84
SDH6YDR379C-A GAL2P13181 574 aa3.57□□□□□ -1.84
SDH6YDR379C-A GLO4Q12320 285 aa3.57□□□□□ -1.84
SDH6YDR379C-A YVC1Q12324 675 aa3.57□□□□□ -1.84
SDH6YDR379C-A GTS1P40956 396 aa3.56□□□□□ -1.84
SDH6YDR379C-A MSH4P40965 878 aaPredicted RBP3.55□□□□□ -1.84
SDH6YDR379C-A ALT1P52893 592 aa3.55□□□□□ -1.84
SDH6YDR379C-A PUS9Q12069 462 aa3.55□□□□□ -1.84
SDH6YDR379C-A PRE10P21242 288 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
SDH6YDR379C-A ISC10P32645 267 aa3.54□□□□□ -1.84
SDH6YDR379C-A MPT5P39016 859 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
SDH6YDR379C-A ATG32P40458 529 aa3.54□□□□□ -1.84
SDH6YDR379C-A RPL34BP40525 121 aaKnown RBP3.54□□□□□ -1.84
SDH6YDR379C-A BIM1P40013 344 aa3.53□□□□□ -1.84
SDH6YDR379C-A SNO2P53823 222 aa3.53□□□□□ -1.84
SDH6YDR379C-A TRM2P33753 639 aa3.52□□□□□ -1.85
SDH6YDR379C-A HXT8P40886 569 aa3.52□□□□□ -1.85
SDH6YDR379C-A RGD2P43556 714 aa3.52□□□□□ -1.85
SDH6YDR379C-A GCV1P48015 400 aa3.52□□□□□ -1.85
SDH6YDR379C-A SLI1P53304 468 aa3.51□□□□□ -1.85
SDH6YDR379C-A TAT2P38967 592 aa3.5□□□□□ -1.85
SDH6YDR379C-A MSE1P48525 536 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms