RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C THI80P35202 319 aa1.98□□□□□ -2.09
SEC1YDR164C FLR1P38124 548 aa1.98□□□□□ -2.09
SEC1YDR164C YIL165CP40446 119 aa1.98□□□□□ -2.09
SEC1YDR164C MMM1P41800 426 aa1.98□□□□□ -2.09
SEC1YDR164C LEM3P42838 414 aa1.98□□□□□ -2.09
SEC1YDR164C FOX2Q02207 900 aaKnown RBP1.98□□□□□ -2.09
SEC1YDR164C SPO71Q03868 1245 aa1.98□□□□□ -2.09
SEC1YDR164C HDA2Q06629 674 aa1.98□□□□□ -2.09
SEC1YDR164C LDH1P38139 375 aa1.98□□□□□ -2.09
SEC1YDR164C ISW1P38144 1129 aa1.98□□□□□ -2.09
SEC1YDR164C CWH41P53008 833 aa1.98□□□□□ -2.09
SEC1YDR164C MRPL33P20084 86 aa1.97□□□□□ -2.09
SEC1YDR164C RTG2P32608 588 aaKnown RBP1.97□□□□□ -2.09
SEC1YDR164C TFA2P36145 328 aa1.97□□□□□ -2.09
SEC1YDR164C RPN1P38764 993 aaKnown RBP1.97□□□□□ -2.09
SEC1YDR164C NEO1P40527 1151 aa1.97□□□□□ -2.09
SEC1YDR164C CIT3P43635 486 aa1.97□□□□□ -2.09
SEC1YDR164C HGH1P48362 394 aaKnown RBP1.97□□□□□ -2.09
SEC1YDR164C BIO5P53744 561 aaKnown RBP1.97□□□□□ -2.09
SEC1YDR164C CAB1Q04430 367 aa1.97□□□□□ -2.09
SEC1YDR164C VAN1P23642 535 aa1.96□□□□□ -2.1
SEC1YDR164C ROM1P53046 1155 aa1.96□□□□□ -2.1
SEC1YDR164C RCM1P53972 490 aa1.96□□□□□ -2.1
SEC1YDR164C SOG2Q08817 791 aa1.96□□□□□ -2.1
SEC1YDR164C RPL34BP40525 121 aaKnown RBP1.96□□□□□ -2.1
SEC1YDR164C ALD3P54114 506 aa1.96□□□□□ -2.1
SEC1YDR164C TAD3Q9URQ3 322 aa1.96□□□□□ -2.1
SEC1YDR164C TIF1P10081 395 aaKnown RBP1.95□□□□□ -2.1
SEC1YDR164C PRP6P19735 899 aaPredicted RBP1.95□□□□□ -2.1
SEC1YDR164C YBR287WP38355 427 aa1.95□□□□□ -2.1
SEC1YDR164C RQC2Q12532 1038 aaKnown RBP1.95□□□□□ -2.1
SEC1YDR164C GPT2P36148 743 aa1.95□□□□□ -2.1
SEC1YDR164C AIM3P38266 947 aaKnown RBP1.95□□□□□ -2.1
SEC1YDR164C BIM1P40013 344 aa1.95□□□□□ -2.1
SEC1YDR164C ATG32P40458 529 aa1.95□□□□□ -2.1
SEC1YDR164C YMR074CQ04773 145 aa1.95□□□□□ -2.1
SEC1YDR164C MSN1P22148 382 aa1.94□□□□□ -2.1
SEC1YDR164C NFS1P25374 497 aa1.94□□□□□ -2.1
SEC1YDR164C BOI1P38041 980 aaKnown RBP1.94□□□□□ -2.1
SEC1YDR164C FAR11P53917 953 aa1.94□□□□□ -2.1
SEC1YDR164C EMG1Q06287 252 aaKnown RBP1.94□□□□□ -2.1
SEC1YDR164C TRS33Q99394 268 aa1.94□□□□□ -2.1
SEC1YDR164C FUS1P11710 512 aa1.93□□□□□ -2.1
SEC1YDR164C ADP1P25371 1049 aa1.93□□□□□ -2.1
SEC1YDR164C SUV3P32580 737 aa1.93□□□□□ -2.1
SEC1YDR164C GSF2Q04697 403 aaKnown RBP1.93□□□□□ -2.1
SEC1YDR164C YOR059CQ08448 450 aaKnown RBP1.93□□□□□ -2.1
SEC1YDR164C YOR223WQ12015 292 aa1.93□□□□□ -2.1
SEC1YDR164C GAL2P13181 574 aa1.93□□□□□ -2.1
SEC1YDR164C OYE3P41816 400 aaPredicted RBP1.93□□□□□ -2.1
SEC1YDR164C HAS1Q03532 505 aaKnown RBP1.93□□□□□ -2.1
SEC1YDR164C LEU3P08638 886 aa1.92□□□□□ -2.1
SEC1YDR164C YBR197CP38306 217 aa1.92□□□□□ -2.1
SEC1YDR164C AIM46P38885 310 aa1.92□□□□□ -2.1
SEC1YDR164C YJR124CP47159 448 aa1.92□□□□□ -2.1
SEC1YDR164C SSY1Q03770 852 aa1.92□□□□□ -2.1
SEC1YDR164C YPT53P36019 220 aa1.92□□□□□ -2.1
SEC1YDR164C ABZ1P37254 787 aaPredicted RBP1.92□□□□□ -2.1
SEC1YDR164C FIR1P40020 876 aa1.92□□□□□ -2.1
SEC1YDR164C DOT1Q04089 582 aaKnown RBP1.92□□□□□ -2.1
SEC1YDR164C ISC10P32645 267 aa1.91□□□□□ -2.1
SEC1YDR164C TOD6P34219 525 aa1.91□□□□□ -2.1
SEC1YDR164C SIS2P36024 562 aa1.91□□□□□ -2.1
SEC1YDR164C RIM8P53179 542 aa1.91□□□□□ -2.1
SEC1YDR164C MRPL22P53881 309 aa1.91□□□□□ -2.1
SEC1YDR164C TUB2P02557 457 aaKnown RBP1.9□□□□□ -2.11
SEC1YDR164C RPS4AP0CX35 261 aaKnown RBP1.9□□□□□ -2.11
SEC1YDR164C RPS4BP0CX36 261 aaKnown RBP1.9□□□□□ -2.11
SEC1YDR164C PRO1P32264 428 aa1.9□□□□□ -2.11
SEC1YDR164C FET4P40988 552 aa1.9□□□□□ -2.11
SEC1YDR164C TRE1Q08919 783 aa1.9□□□□□ -2.11
SEC1YDR164C PNS1Q12412 539 aa1.9□□□□□ -2.11
SEC1YDR164C ORC3P54790 616 aa1.89□□□□□ -2.11
SEC1YDR164C ECM23Q02710 187 aa1.89□□□□□ -2.11
SEC1YDR164C LPX1Q12405 387 aaKnown RBP1.89□□□□□ -2.11
SEC1YDR164C GLO4Q12320 285 aa1.89□□□□□ -2.11
SEC1YDR164C SHM2P37291 469 aaKnown RBP1.88□□□□□ -2.11
SEC1YDR164C HXT8P40886 569 aa1.88□□□□□ -2.11
SEC1YDR164C ALD4P46367 519 aaKnown RBP1.88□□□□□ -2.11
SEC1YDR164C EAR1Q03212 550 aa1.88□□□□□ -2.11
SEC1YDR164C YLL054CQ12244 843 aa1.88□□□□□ -2.11
SEC1YDR164C YDL177CQ12257 170 aa1.88□□□□□ -2.11
SEC1YDR164C HVG1P0CE11 249 aa1.88□□□□□ -2.11
SEC1YDR164C UBX7P38349 436 aa1.88□□□□□ -2.11
SEC1YDR164C ETP1P38748 585 aaKnown RBP1.88□□□□□ -2.11
SEC1YDR164C PTC7P38797 343 aa1.88□□□□□ -2.11
SEC1YDR164C RGD2P43556 714 aa1.88□□□□□ -2.11
SEC1YDR164C SOD2P00447 233 aa1.87□□□□□ -2.11
SEC1YDR164C PEX7P39108 375 aa1.87□□□□□ -2.11
SEC1YDR164C GTS1P40956 396 aa1.87□□□□□ -2.11
SEC1YDR164C YML122CQ03207 126 aa1.87□□□□□ -2.11
SEC1YDR164C YPL277CQ08989 487 aa1.87□□□□□ -2.11
SEC1YDR164C CLU1Q03690 1277 aaKnown RBP1.86□□□□□ -2.11
SEC1YDR164C YVC1Q12324 675 aa1.86□□□□□ -2.11
SEC1YDR164C RPS13P05756 151 aaKnown RBP1.86□□□□□ -2.11
SEC1YDR164C CTS1P29029 562 aa1.86□□□□□ -2.11
SEC1YDR164C TGL4P36165 910 aa1.86□□□□□ -2.11
SEC1YDR164C MSH4P40965 878 aaPredicted RBP1.86□□□□□ -2.11
SEC1YDR164C SUT1P53032 299 aaKnown RBP1.86□□□□□ -2.11
SEC1YDR164C PUN1Q06991 263 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms