RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	ERR2	P0CX11	437 aa		6.55	□□□□□ -1.36
LCB2	YDR062W	GAL11	P19659	1081 aa		6.55	□□□□□ -1.36
LCB2	YDR062W	MRC1	P25588	1096 aa		6.55	□□□□□ -1.36
LCB2	YDR062W	RTG1	P32607	177 aa		6.55	□□□□□ -1.36
LCB2	YDR062W	SEC6	P32844	805 aa		6.55	□□□□□ -1.36
LCB2	YDR062W	LDH1	P38139	375 aa		6.55	□□□□□ -1.36
LCB2	YDR062W	NTA1	P40354	457 aa		6.55	□□□□□ -1.36
LCB2	YDR062W	ZDS1	P50111	915 aa	Known RBP	6.55	□□□□□ -1.36
LCB2	YDR062W	YGR125W	P53273	1036 aa		6.55	□□□□□ -1.36
LCB2	YDR062W	RTT10	Q08924	1013 aa		6.55	□□□□□ -1.36
LCB2	YDR062W	MCM5	P29496	775 aa	Known RBP	6.55	□□□□□ -1.36
LCB2	YDR062W	PAF1	P38351	445 aa		6.55	□□□□□ -1.36
LCB2	YDR062W	WTM2	Q12206	467 aa		6.55	□□□□□ -1.36
LCB2	YDR062W	OSH2	Q12451	1283 aa		6.55	□□□□□ -1.36
LCB2	YDR062W	SPT6	P23615	1451 aa	Known RBP	6.54	□□□□□ -1.36
LCB2	YDR062W	FLP1	P03870	423 aa		6.54	□□□□□ -1.36
LCB2	YDR062W	MKS1	P34072	584 aa		6.54	□□□□□ -1.36
LCB2	YDR062W	IRS4	P36115	615 aa	Known RBP	6.54	□□□□□ -1.36
LCB2	YDR062W	GGA2	P38817	585 aa	Known RBP	6.54	□□□□□ -1.36
LCB2	YDR062W	FIR1	P40020	876 aa		6.54	□□□□□ -1.36
LCB2	YDR062W	PSY2	P40164	858 aa		6.54	□□□□□ -1.36
LCB2	YDR062W	RGD2	P43556	714 aa		6.54	□□□□□ -1.36
LCB2	YDR062W	YDL129W	Q07555	291 aa		6.54	□□□□□ -1.36
LCB2	YDR062W	SPO75	Q07798	868 aa		6.54	□□□□□ -1.36
LCB2	YDR062W	TIF6	Q12522	245 aa	Known RBP	6.54	□□□□□ -1.36
LCB2	YDR062W	ADR1	P07248	1323 aa		6.53	□□□□□ -1.36
LCB2	YDR062W	RPP2B	P02400	110 aa	Known RBP	6.53	□□□□□ -1.36
LCB2	YDR062W	BAS1	P22035	811 aa		6.53	□□□□□ -1.36
LCB2	YDR062W	UGA4	P32837	571 aa		6.53	□□□□□ -1.36
LCB2	YDR062W	DYS1	P38791	387 aa		6.53	□□□□□ -1.36
LCB2	YDR062W	ITC1	P53125	1264 aa		6.53	□□□□□ -1.36
LCB2	YDR062W	YNR029C	P53729	429 aa	Known RBP	6.53	□□□□□ -1.36
LCB2	YDR062W	FOL1	P53848	824 aa		6.53	□□□□□ -1.36
LCB2	YDR062W	ADI1	Q03677	179 aa		6.53	□□□□□ -1.36
LCB2	YDR062W	KAR1	P11927	433 aa		6.52	□□□□□ -1.37
LCB2	YDR062W	UTP4	Q06679	776 aa	Known RBP	6.52	□□□□□ -1.37
LCB2	YDR062W	YPR015C	Q12531	247 aa		6.52	□□□□□ -1.37
LCB2	YDR062W	GCR1	P07261	785 aa		6.52	□□□□□ -1.37
LCB2	YDR062W	MSN1	P22148	382 aa		6.52	□□□□□ -1.37
LCB2	YDR062W	YBR184W	P38299	523 aa		6.52	□□□□□ -1.37
LCB2	YDR062W	PIC2	P40035	300 aa		6.52	□□□□□ -1.37
LCB2	YDR062W	ULP1	Q02724	621 aa		6.52	□□□□□ -1.37
LCB2	YDR062W	CAN1	P04817	590 aa		6.51	□□□□□ -1.37
LCB2	YDR062W	STE6	P12866	1290 aa		6.51	□□□□□ -1.37
LCB2	YDR062W	HSP60	P19882	572 aa	Known RBP	6.51	□□□□□ -1.37
LCB2	YDR062W	STE5	P32917	917 aa		6.51	□□□□□ -1.37
LCB2	YDR062W	EEB1	Q02891	456 aa		6.51	□□□□□ -1.37
LCB2	YDR062W	CEF1	Q03654	590 aa	Predicted RBP	6.51	□□□□□ -1.37
LCB2	YDR062W	YDL121C	Q07541	149 aa		6.51	□□□□□ -1.37
LCB2	YDR062W	NTG2	Q08214	380 aa		6.51	□□□□□ -1.37
LCB2	YDR062W	TMA46	Q12000	345 aa	Known RBP	6.51	□□□□□ -1.37
LCB2	YDR062W	RPL8A	P17076	256 aa	Known RBP	6.5	□□□□□ -1.37
LCB2	YDR062W	RAD27	P26793	382 aa		6.5	□□□□□ -1.37
LCB2	YDR062W	RPL8B	P29453	256 aa	Known RBP	6.5	□□□□□ -1.37
LCB2	YDR062W	UTP7	P40055	554 aa	Known RBP	6.5	□□□□□ -1.37
LCB2	YDR062W	SUM1	P46676	1062 aa		6.5	□□□□□ -1.37
LCB2	YDR062W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	6.5	□□□□□ -1.37	not detected
LCB2	YDR062W	ECM16	Q04217	1267 aa	Known RBP	6.5	□□□□□ -1.37
LCB2	YDR062W	CIT1	P00890	479 aa		6.49	□□□□□ -1.37
LCB2	YDR062W	PWP2	P25635	923 aa	Known RBP	6.49	□□□□□ -1.37
LCB2	YDR062W	MSH2	P25847	964 aa		6.49	□□□□□ -1.37
LCB2	YDR062W	SFP1	P32432	683 aa		6.49	□□□□□ -1.37
LCB2	YDR062W	MRL1	Q06815	381 aa		6.49	□□□□□ -1.37
LCB2	YDR062W	LDB19	Q12502	818 aa		6.49	□□□□□ -1.37
LCB2	YDR062W	VPS24	P36095	224 aa	Known RBP	6.49	□□□□□ -1.37
LCB2	YDR062W	QDR2	P40474	542 aa		6.49	□□□□□ -1.37
LCB2	YDR062W	PEX8	P53248	589 aa		6.49	□□□□□ -1.37
LCB2	YDR062W	SYH1	Q02875	849 aa	Known RBP	6.49	□□□□□ -1.37
LCB2	YDR062W	YDR344C	Q05510	147 aa		6.49	□□□□□ -1.37
LCB2	YDR062W	FMP25	Q08023	583 aa		6.49	□□□□□ -1.37
LCB2	YDR062W	Q0182	Q9ZZW1	134 aa		6.49	□□□□□ -1.37
LCB2	YDR062W	PTC2	P39966	464 aa	Known RBP	6.48	□□□□□ -1.37
LCB2	YDR062W	KRI1	P42846	591 aa	Known RBP	6.48	□□□□□ -1.37
LCB2	YDR062W	ERP6	P53198	216 aa		6.48	□□□□□ -1.37
LCB2	YDR062W	KRE33	P53914	1056 aa	Known RBP	6.48	□□□□□ -1.37
LCB2	YDR062W	AGP1	P25376	633 aa		6.47	□□□□□ -1.37
LCB2	YDR062W	IRR1	P40541	1150 aa		6.47	□□□□□ -1.37
LCB2	YDR062W	MON1	P53129	644 aa		6.47	□□□□□ -1.37
LCB2	YDR062W	SHE9	Q04172	456 aa		6.47	□□□□□ -1.37
LCB2	YDR062W	DFG5	Q05031	458 aa		6.47	□□□□□ -1.37
LCB2	YDR062W	SPA2	P23201	1466 aa	Known RBP	6.47	□□□□□ -1.37
LCB2	YDR062W	VMA4	P22203	233 aa	Known RBP	6.46	□□□□□ -1.37
LCB2	YDR062W	MRP8	P35719	219 aa		6.46	□□□□□ -1.37
LCB2	YDR062W	FUI1	P38196	639 aa		6.46	□□□□□ -1.37
LCB2	YDR062W	XKS1	P42826	600 aa		6.46	□□□□□ -1.37
LCB2	YDR062W	YNL165W	P53891	406 aa		6.46	□□□□□ -1.37
LCB2	YDR062W	EAF1	Q06337	982 aa		6.46	□□□□□ -1.37
LCB2	YDR062W	ESC2	Q06340	456 aa		6.46	□□□□□ -1.37
LCB2	YDR062W	MLF3	P32047	452 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	SPT23	P35210	1082 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	YBR287W	P38355	427 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	NUT1	P53114	1132 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	CTR9	P89105	1077 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	NCR1	Q12200	1170 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	THS1	P04801	734 aa	Known RBP	6.45	□□□□□ -1.38
LCB2	YDR062W	ARE1	P25628	610 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	SBA1	P28707	216 aa	Known RBP	6.45	□□□□□ -1.38
LCB2	YDR062W	ISW1	P38144	1129 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	BOI2	P39969	1040 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	DLD3	P39976	496 aa	Known RBP	6.45	□□□□□ -1.38

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms