RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP30	YCR021C	RAD24	P32641	659 aa		5.07	□□□□□ -1.6
HSP30	YCR021C	RPN1	P38764	993 aa	Known RBP	5.07	□□□□□ -1.6
HSP30	YCR021C	YIL092W	P40497	633 aa		5.07	□□□□□ -1.6
HSP30	YCR021C	YGL082W	P53155	381 aa		5.07	□□□□□ -1.6
HSP30	YCR021C	RMT2	Q03305	412 aa		5.07	□□□□□ -1.6
HSP30	YCR021C	VPS64	Q03944	604 aa		5.07	□□□□□ -1.6
HSP30	YCR021C	RIX7	Q07844	837 aa	Known RBP	5.07	□□□□□ -1.6
HSP30	YCR021C	CTI6	Q08923	506 aa		5.07	□□□□□ -1.6
HSP30	YCR021C	RPP0	P05317	312 aa	Known RBP	5.06	□□□□□ -1.6
HSP30	YCR021C	UBP1	P25037	809 aa		5.06	□□□□□ -1.6
HSP30	YCR021C	GRX1	P25373	110 aa	Known RBP	5.06	□□□□□ -1.6
HSP30	YCR021C	FCP1	Q03254	732 aa		5.06	□□□□□ -1.6
HSP30	YCR021C	SRF1	Q12516	437 aa		5.06	□□□□□ -1.6
HSP30	YCR021C	SSA2	P10592	639 aa	Known RBP	5.05	□□□□□ -1.6
HSP30	YCR021C	GUA1	P38625	525 aa	Known RBP	5.05	□□□□□ -1.6
HSP30	YCR021C	PTK2	P47116	818 aa	Known RBP	5.05	□□□□□ -1.6
HSP30	YCR021C	CSI1	Q04368	295 aa		5.05	□□□□□ -1.6
HSP30	YCR021C	NSE3	Q05541	303 aa		5.05	□□□□□ -1.6
HSP30	YCR021C	YOL057W	Q08225	711 aa		5.05	□□□□□ -1.6
HSP30	YCR021C	YPR204W	Q08995	1032 aa		5.05	□□□□□ -1.6
HSP30	YCR021C	NYV1	Q12255	253 aa		5.05	□□□□□ -1.6
HSP30	YCR021C	SWI1	P09547	1314 aa		5.04	□□□□□ -1.6
HSP30	YCR021C	CAF20	P12962	161 aa	Known RBP	5.04	□□□□□ -1.6
HSP30	YCR021C	SER1	P33330	395 aa	Known RBP	5.04	□□□□□ -1.6
HSP30	YCR021C	MAM1	P40065	302 aa		5.04	□□□□□ -1.6
HSP30	YCR021C	FIG4	P42837	879 aa		5.04	□□□□□ -1.6
HSP30	YCR021C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.04	□□□□□ -1.6	not detected
HSP30	YCR021C	YDR306C	Q06640	478 aa		5.04	□□□□□ -1.6
HSP30	YCR021C	YDL176W	Q12027	708 aa		5.04	□□□□□ -1.6
HSP30	YCR021C	MRP7	P12687	371 aa		5.03	□□□□□ -1.6
HSP30	YCR021C	SLA1	P32790	1244 aa		5.03	□□□□□ -1.6
HSP30	YCR021C	RIM15	P43565	1770 aa		5.02	□□□□□ -1.61
HSP30	YCR021C	NUP133	P36161	1157 aa		5.02	□□□□□ -1.61
HSP30	YCR021C	EMW1	P42842	904 aa	Known RBP	5.02	□□□□□ -1.61
HSP30	YCR021C	NUP85	P46673	744 aa		5.02	□□□□□ -1.61
HSP30	YCR021C	TOS1	P38288	455 aa		5.01	□□□□□ -1.61
HSP30	YCR021C	YPP1	P46951	817 aa		5.01	□□□□□ -1.61
HSP30	YCR021C	EAF6	P47128	113 aa		5.01	□□□□□ -1.61
HSP30	YCR021C	OPT2	Q06593	877 aa		5.01	□□□□□ -1.61
HSP30	YCR021C	BUG1	Q12191	341 aa		5.01	□□□□□ -1.61
HSP30	YCR021C	PHM7	Q12252	991 aa		5.01	□□□□□ -1.61
HSP30	YCR021C	LYS2	P07702	1392 aa		5.01	□□□□□ -1.61
HSP30	YCR021C	EDE1	P34216	1381 aa		5.01	□□□□□ -1.61
HSP30	YCR021C	LPD1	P09624	499 aa	Known RBP	5	□□□□□ -1.61
HSP30	YCR021C	ACO2	P39533	789 aa		5	□□□□□ -1.61
HSP30	YCR021C	POL32	P47110	350 aa		5	□□□□□ -1.61
HSP30	YCR021C	ALD2	P47771	506 aa		5	□□□□□ -1.61
HSP30	YCR021C	PUF6	Q04373	656 aa	Known RBP	5	□□□□□ -1.61
HSP30	YCR021C	SSP2	Q08646	371 aa		5	□□□□□ -1.61
HSP30	YCR021C	TEC1	P18412	486 aa		4.99	□□□□□ -1.61
HSP30	YCR021C	YFR016C	P43597	1233 aa	Known RBP	4.99	□□□□□ -1.61
HSP30	YCR021C	SPO1	P53541	631 aa		4.99	□□□□□ -1.61
HSP30	YCR021C	HPC2	Q01448	625 aa		4.99	□□□□□ -1.61
HSP30	YCR021C	YLR346C	Q06139	101 aa		4.99	□□□□□ -1.61
HSP30	YCR021C	YPR084W	Q06821	456 aa		4.99	□□□□□ -1.61
HSP30	YCR021C	RAD2	P07276	1031 aa		4.98	□□□□□ -1.61
HSP30	YCR021C	MAK16	P10962	306 aa	Predicted RBP	4.98	□□□□□ -1.61
HSP30	YCR021C	GLY1	P37303	387 aa	Known RBP	4.98	□□□□□ -1.61
HSP30	YCR021C	UGA2	P38067	497 aa		4.98	□□□□□ -1.61
HSP30	YCR021C	BOI2	P39969	1040 aa		4.98	□□□□□ -1.61
HSP30	YCR021C	ALD3	P54114	506 aa		4.98	□□□□□ -1.61
HSP30	YCR021C	PKH1	Q03407	766 aa		4.98	□□□□□ -1.61
HSP30	YCR021C	ARG82	P07250	355 aa		4.97	□□□□□ -1.61
HSP30	YCR021C	YNG2	P38806	282 aa	Known RBP	4.97	□□□□□ -1.61
HSP30	YCR021C	AAD14	P42884	376 aa		4.97	□□□□□ -1.61
HSP30	YCR021C	ITC1	P53125	1264 aa		4.97	□□□□□ -1.61
HSP30	YCR021C	CAF120	P53836	1060 aa		4.97	□□□□□ -1.61
HSP30	YCR021C	DNM1	P54861	757 aa		4.97	□□□□□ -1.61
HSP30	YCR021C	UBP16	Q02863	499 aa		4.97	□□□□□ -1.61
HSP30	YCR021C	NOP8	Q08287	484 aa	Predicted RBP	4.97	□□□□□ -1.61
HSP30	YCR021C	SMY1	P32364	656 aa	Known RBP	4.96	□□□□□ -1.62
HSP30	YCR021C	DLD1	P32891	587 aa		4.96	□□□□□ -1.62
HSP30	YCR021C	MKS1	P34072	584 aa		4.96	□□□□□ -1.62
HSP30	YCR021C	UBP12	P39538	1254 aa		4.96	□□□□□ -1.62
HSP30	YCR021C	YJR008W	P47085	338 aa		4.96	□□□□□ -1.62
HSP30	YCR021C	CWH41	P53008	833 aa		4.96	□□□□□ -1.62
HSP30	YCR021C	UTP22	P53254	1237 aa	Predicted RBP	4.96	□□□□□ -1.62
HSP30	YCR021C	NAF1	P53919	492 aa	Known RBP	4.96	□□□□□ -1.62
HSP30	YCR021C	KIN4	Q01919	800 aa		4.96	□□□□□ -1.62
HSP30	YCR021C	DFG5	Q05031	458 aa		4.96	□□□□□ -1.62
HSP30	YCR021C	RPS19A	P07280	144 aa	Known RBP	4.95	□□□□□ -1.62
HSP30	YCR021C	RPS19B	P07281	144 aa	Predicted RBP	4.95	□□□□□ -1.62
HSP30	YCR021C	MIP1	P15801	1254 aa		4.95	□□□□□ -1.62
HSP30	YCR021C	GUT2	P32191	649 aa		4.95	□□□□□ -1.62
HSP30	YCR021C	KTR3	P38130	404 aa	Predicted RBP	4.95	□□□□□ -1.62
HSP30	YCR021C	MSN5	P52918	1224 aa		4.95	□□□□□ -1.62
HSP30	YCR021C	PSH1	Q12161	406 aa		4.95	□□□□□ -1.62
HSP30	YCR021C	YBL036C	P38197	257 aa		4.94	□□□□□ -1.62
HSP30	YCR021C	YRB30	P53107	440 aa	Predicted RBP	4.94	□□□□□ -1.62
HSP30	YCR021C	SCW11	P53189	542 aa		4.94	□□□□□ -1.62
HSP30	YCR021C	LSC2	P53312	427 aa		4.94	□□□□□ -1.62
HSP30	YCR021C	TFB3	Q03290	321 aa		4.94	□□□□□ -1.62
HSP30	YCR021C	RMD1	Q03441	430 aa		4.94	□□□□□ -1.62
HSP30	YCR021C	BDF2	Q07442	638 aa		4.94	□□□□□ -1.62
HSP30	YCR021C	TY1A-BL	Q12266	440 aa		4.94	□□□□□ -1.62
HSP30	YCR021C	PKC1	P24583	1151 aa		4.93	□□□□□ -1.62
HSP30	YCR021C	FRD1	P32614	470 aa	Known RBP	4.93	□□□□□ -1.62
HSP30	YCR021C	NGR1	P32831	672 aa	Known RBP	4.93	□□□□□ -1.62
HSP30	YCR021C	BRL1	P38770	471 aa		4.93	□□□□□ -1.62
HSP30	YCR021C	MDG1	P53885	366 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 128.7 ms