RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	SPE2	P21182	396 aa		7.12	□□□□□ -1.27
ROX3	YBL093C	UBP1	P25037	809 aa		7.12	□□□□□ -1.27
ROX3	YBL093C	CWH41	P53008	833 aa		7.12	□□□□□ -1.27
ROX3	YBL093C	RPL34A	P87262	121 aa	Predicted RBP	7.12	□□□□□ -1.27
ROX3	YBL093C	NGR1	P32831	672 aa	Known RBP	7.11	□□□□□ -1.27
ROX3	YBL093C	ACO2	P39533	789 aa		7.11	□□□□□ -1.27
ROX3	YBL093C	IRE1	P32361	1115 aa		7.1	□□□□□ -1.27
ROX3	YBL093C	SLA1	P32790	1244 aa		7.1	□□□□□ -1.27
ROX3	YBL093C	JJJ2	P46997	583 aa		7.1	□□□□□ -1.27
ROX3	YBL093C	PUN1	Q06991	263 aa		7.1	□□□□□ -1.27
ROX3	YBL093C	SEC3	P33332	1336 aa	Known RBP	7.09	□□□□□ -1.27
ROX3	YBL093C	CAF120	P53836	1060 aa		7.09	□□□□□ -1.27
ROX3	YBL093C	RIA1	P53893	1110 aa		7.09	□□□□□ -1.27
ROX3	YBL093C	SPT7	P35177	1332 aa		7.08	□□□□□ -1.28
ROX3	YBL093C	CDC19	P00549	500 aa	Known RBP	7.08	□□□□□ -1.28
ROX3	YBL093C	UBP15	P50101	1230 aa		7.08	□□□□□ -1.28
ROX3	YBL093C	NAP1	P25293	417 aa	Known RBP	7.07	□□□□□ -1.28
ROX3	YBL093C	CWC15	Q03772	175 aa	Known RBP	7.07	□□□□□ -1.28
ROX3	YBL093C	Q0182	Q9ZZW1	134 aa		7.07	□□□□□ -1.28
ROX3	YBL093C	SCT1	P32784	759 aa		7.06	□□□□□ -1.28
ROX3	YBL093C	YIR007W	P40566	764 aa		7.06	□□□□□ -1.28
ROX3	YBL093C	YNR029C	P53729	429 aa	Known RBP	7.06	□□□□□ -1.28
ROX3	YBL093C	PDS5	Q04264	1277 aa		7.06	□□□□□ -1.28
ROX3	YBL093C	TY1A-DR3	Q12441	440 aa		7.06	□□□□□ -1.28
ROX3	YBL093C	SRS2	P12954	1174 aa		7.05	□□□□□ -1.28
ROX3	YBL093C	SHM1	P37292	490 aa	Predicted RBP	7.05	□□□□□ -1.28
ROX3	YBL093C	RGA1	P39083	1007 aa		7.05	□□□□□ -1.28
ROX3	YBL093C	CHZ1	P40019	153 aa	Predicted RBP	7.05	□□□□□ -1.28
ROX3	YBL093C	YTA6	P40328	754 aa		7.05	□□□□□ -1.28
ROX3	YBL093C	TY1A-MR1	Q04215	440 aa		7.05	□□□□□ -1.28
ROX3	YBL093C	TY4B-H	P0C2J7	1802 aa		7.04	□□□□□ -1.28
ROX3	YBL093C	TY4B-J	P47024	1803 aa		7.04	□□□□□ -1.28
ROX3	YBL093C	RPS31	P05759	152 aa	Known RBP	7.04	□□□□□ -1.28
ROX3	YBL093C	SUV3	P32580	737 aa		7.04	□□□□□ -1.28
ROX3	YBL093C	GEF1	P37020	779 aa		7.04	□□□□□ -1.28
ROX3	YBL093C	ROG3	P43602	733 aa		7.04	□□□□□ -1.28
ROX3	YBL093C	YNL165W	P53891	406 aa		7.04	□□□□□ -1.28
ROX3	YBL093C	PSK1	P31374	1356 aa		7.04	□□□□□ -1.28
ROX3	YBL093C	YML133C	Q03099	1374 aa		7.04	□□□□□ -1.28
ROX3	YBL093C	YLL067C	Q07888	1374 aa		7.04	□□□□□ -1.28
ROX3	YBL093C	YLL066C	Q99208	1374 aa		7.04	□□□□□ -1.28
ROX3	YBL093C	SCD5	P34758	872 aa		7.03	□□□□□ -1.28
ROX3	YBL093C	NAM8	Q00539	523 aa	Known RBP	7.03	□□□□□ -1.28
ROX3	YBL093C	YDL176W	Q12027	708 aa		7.03	□□□□□ -1.28
ROX3	YBL093C	PDC6	P26263	563 aa	Known RBP	7.02	□□□□□ -1.29
ROX3	YBL093C	PPH3	P32345	308 aa		7.02	□□□□□ -1.29
ROX3	YBL093C	HXT5	P38695	592 aa		7.02	□□□□□ -1.29
ROX3	YBL093C	RCM1	P53972	490 aa		7.02	□□□□□ -1.29
ROX3	YBL093C	PNP1	Q05788	311 aa		7.02	□□□□□ -1.29
ROX3	YBL093C	PSH1	Q12161	406 aa		7.02	□□□□□ -1.29
ROX3	YBL093C	MLF3	P32047	452 aa		7.01	□□□□□ -1.29
ROX3	YBL093C	YBR197C	P38306	217 aa		7.01	□□□□□ -1.29
ROX3	YBL093C	ENP1	P38333	483 aa	Known RBP	7	□□□□□ -1.29
ROX3	YBL093C	UTP4	Q06679	776 aa	Known RBP	7	□□□□□ -1.29
ROX3	YBL093C	RRN6	P32786	894 aa		6.99	□□□□□ -1.29
ROX3	YBL093C	THI12	P42883	340 aa		6.99	□□□□□ -1.29
ROX3	YBL093C	THI5	P43534	340 aa		6.99	□□□□□ -1.29
ROX3	YBL093C	THI11	P47183	340 aa		6.99	□□□□□ -1.29
ROX3	YBL093C	FOX2	Q02207	900 aa	Known RBP	6.99	□□□□□ -1.29
ROX3	YBL093C	YMR265C	Q03508	461 aa	Known RBP	6.99	□□□□□ -1.29
ROX3	YBL093C	THI13	Q07748	340 aa		6.99	□□□□□ -1.29
ROX3	YBL093C	YIL177C	P40434	1758 aa		6.98	□□□□□ -1.29
ROX3	YBL093C	YJL225C	P40889	1758 aa		6.98	□□□□□ -1.29
ROX3	YBL093C	CDC3	P32457	520 aa	Known RBP	6.98	□□□□□ -1.29
ROX3	YBL093C	TPS3	P38426	1054 aa	Known RBP	6.98	□□□□□ -1.29
ROX3	YBL093C	CUZ1	P53899	274 aa		6.98	□□□□□ -1.29
ROX3	YBL093C	CCP1	P00431	361 aa		6.97	□□□□□ -1.29
ROX3	YBL093C	LEU1	P07264	779 aa	Known RBP	6.97	□□□□□ -1.29
ROX3	YBL093C	DIT1	P21623	536 aa		6.97	□□□□□ -1.29
ROX3	YBL093C	ISC10	P32645	267 aa		6.97	□□□□□ -1.29
ROX3	YBL093C	MRPL16	P38064	232 aa		6.97	□□□□□ -1.29
ROX3	YBL093C	MTO1	P53070	669 aa		6.97	□□□□□ -1.29
ROX3	YBL093C	FUR4	P05316	633 aa	Known RBP	6.96	□□□□□ -1.3
ROX3	YBL093C	MRPL33	P20084	86 aa		6.96	□□□□□ -1.3
ROX3	YBL093C	KAP122	P32767	1081 aa		6.96	□□□□□ -1.3
ROX3	YBL093C	YPL062W	Q02781	134 aa		6.96	□□□□□ -1.3
ROX3	YBL093C	ADE6	P38972	1358 aa	Known RBP	6.95	□□□□□ -1.3
ROX3	YBL093C	KRE33	P53914	1056 aa	Known RBP	6.95	□□□□□ -1.3
ROX3	YBL093C	RRP5	Q05022	1729 aa	Known RBP	6.94	□□□□□ -1.3
ROX3	YBL093C	YEF3	P16521	1044 aa	Known RBP	6.94	□□□□□ -1.3
ROX3	YBL093C	VMA3	P25515	160 aa		6.94	□□□□□ -1.3
ROX3	YBL093C	CEM1	P39525	442 aa		6.94	□□□□□ -1.3
ROX3	YBL093C	ALD2	P47771	506 aa		6.94	□□□□□ -1.3
ROX3	YBL093C	ADE12	P80210	433 aa	Known RBP	6.94	□□□□□ -1.3
ROX3	YBL093C	KAR5	Q04746	504 aa		6.94	□□□□□ -1.3
ROX3	YBL093C	STB3	Q12427	513 aa		6.94	□□□□□ -1.3
ROX3	YBL093C	LEU2	P04173	364 aa	Predicted RBP	6.93	□□□□□ -1.3
ROX3	YBL093C	RGP1	P16664	663 aa		6.93	□□□□□ -1.3
ROX3	YBL093C	QDR2	P40474	542 aa		6.93	□□□□□ -1.3
ROX3	YBL093C	MTR4	P47047	1073 aa	Known RBP	6.93	□□□□□ -1.3
ROX3	YBL093C	LYS5	P50113	272 aa		6.93	□□□□□ -1.3
ROX3	YBL093C	RPP1A	P05318	106 aa	Predicted RBP	6.92	□□□□□ -1.3
ROX3	YBL093C	LDH1	P38139	375 aa		6.92	□□□□□ -1.3
ROX3	YBL093C	SPR3	P41901	512 aa		6.92	□□□□□ -1.3
ROX3	YBL093C	PRP43	P53131	767 aa	Known RBP	6.92	□□□□□ -1.3
ROX3	YBL093C	YGR035C	P53222	116 aa		6.92	□□□□□ -1.3
ROX3	YBL093C	HPF1	Q05164	967 aa		6.92	□□□□□ -1.3
ROX3	YBL093C	SNF2	P22082	1703 aa		6.92	□□□□□ -1.3
ROX3	YBL093C	URB1	P34241	1764 aa	Known RBP	6.91	□□□□□ -1.3
ROX3	YBL093C	DYS1	P38791	387 aa		6.91	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms