RNA–Protein interactions for RNA: ENST00000421421.1

GAPDHP49-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 49, humanhuman

BASIC

Gene GAPDHP49, Length 961 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP49-201ENST00000421421 SOCS7O14512 581 aa8.22□□□□□ -1.09
GAPDHP49-201ENST00000421421 PRPF38BQ5VTL8 546 aaKnown RBP8.22□□□□□ -1.09
GAPDHP49-201ENST00000421421 CABLES1Q8TDN4 633 aa8.22□□□□□ -1.09
GAPDHP49-201ENST00000421421 CHD1O14646 1710 aa8.22□□□□□ -1.09
GAPDHP49-201ENST00000421421 GRIN2BQ13224 1484 aa8.21□□□□□ -1.09
GAPDHP49-201ENST00000421421 FGD5Q6ZNL6 1462 aa8.21□□□□□ -1.09
GAPDHP49-201ENST00000421421 MAGI1Q96QZ7 1491 aaPredicted RBP8.21□□□□□ -1.09
GAPDHP49-201ENST00000421421 PRDM2Q13029 1718 aa8.21□□□□□ -1.09
GAPDHP49-201ENST00000421421 HOXA2O43364 376 aa8.21□□□□□ -1.1
GAPDHP49-201ENST00000421421 SAMD7Q7Z3H4 446 aa8.21□□□□□ -1.1
GAPDHP49-201ENST00000421421 WWC1Q8IX03 1113 aa8.21□□□□□ -1.1
GAPDHP49-201ENST00000421421 PRM3Q9NNZ6 103 aa8.21□□□□□ -1.1
GAPDHP49-201ENST00000421421 SYNJ2O15056 1496 aa8.2□□□□□ -1.1
GAPDHP49-201ENST00000421421 SLC10A3P09131 477 aa8.2□□□□□ -1.1
GAPDHP49-201ENST00000421421 FDX1P10109 184 aa8.2□□□□□ -1.1
GAPDHP49-201ENST00000421421 PDIA4P13667 645 aaKnown RBP8.2□□□□□ -1.1
GAPDHP49-201ENST00000421421 HRCP23327 699 aa8.2□□□□□ -1.1
GAPDHP49-201ENST00000421421 SWT1Q5T5J6 900 aaKnown RBP8.2□□□□□ -1.1
GAPDHP49-201ENST00000421421 ZBTB3Q9H5J0 574 aa8.2□□□□□ -1.1
GAPDHP49-201ENST00000421421 GAPVD1Q14C86 1478 aa8.19□□□□□ -1.1
GAPDHP49-201ENST00000421421 USP17L8P0C7I0 530 aa8.19□□□□□ -1.1
GAPDHP49-201ENST00000421421 GGCXP38435 758 aa8.19□□□□□ -1.1
GAPDHP49-201ENST00000421421 ABL2P42684 1182 aa8.19□□□□□ -1.1
GAPDHP49-201ENST00000421421 CUX1P39880 1505 aa8.19□□□□□ -1.1
GAPDHP49-201ENST00000421421 TBC1D2BQ9UPU7 963 aa8.18□□□□□ -1.1
GAPDHP49-201ENST00000421421 SYNJ1O43426 1573 aa8.18□□□□□ -1.1
GAPDHP49-201ENST00000421421 GUCA2AQ02747 115 aa8.17□□□□□ -1.1
GAPDHP49-201ENST00000421421 ZNF516Q92618 1163 aa8.17□□□□□ -1.1
GAPDHP49-201ENST00000421421 PCDHGC3Q9UN70 934 aa8.17□□□□□ -1.1
GAPDHP49-201ENST00000421421 WDR97A6NE52 1622 aa8.16□□□□□ -1.1
GAPDHP49-201ENST00000421421 HDGFP51858 240 aaKnown RBP8.16□□□□□ -1.1
GAPDHP49-201ENST00000421421 TTBK1Q5TCY1 1321 aaPredicted RBP8.16□□□□□ -1.1
GAPDHP49-201ENST00000421421 HLA-CQ95604 372 aa8.16□□□□□ -1.1
GAPDHP49-201ENST00000421421 SLC4A3P48751 1232 aa8.15□□□□□ -1.1
GAPDHP49-201ENST00000421421 GJD4Q96KN9 370 aaPredicted RBP8.15□□□□□ -1.1
GAPDHP49-201ENST00000421421 POM121CA8CG34 1229 aa8.14□□□□□ -1.11
GAPDHP49-201ENST00000421421 MTMR2Q13614 643 aa8.14□□□□□ -1.11
GAPDHP49-201ENST00000421421 NKX2-3Q8TAU0 364 aa8.14□□□□□ -1.11
GAPDHP49-201ENST00000421421 CALR3Q96L12 384 aaKnown RBP8.14□□□□□ -1.11
GAPDHP49-201ENST00000421421 NDUFB9Q9Y6M9 179 aa8.14□□□□□ -1.11
GAPDHP49-201ENST00000421421 CTDSPL2Q05D32 466 aa8.13□□□□□ -1.11
GAPDHP49-201ENST00000421421 GRIPAP1Q4V328 841 aa8.13□□□□□ -1.11
GAPDHP49-201ENST00000421421 SLF2Q8IX21 1173 aa8.13□□□□□ -1.11
GAPDHP49-201ENST00000421421 NECTIN2Q92692 538 aa8.13□□□□□ -1.11
GAPDHP49-201ENST00000421421 APLP1P51693 650 aa8.12□□□□□ -1.11
GAPDHP49-201ENST00000421421 FUT2Q10981 343 aa8.12□□□□□ -1.11
GAPDHP49-201ENST00000421421 HELBQ8NG08 1087 aaPredicted RBP8.12□□□□□ -1.11
GAPDHP49-201ENST00000421421 GLMNQ92990 594 aa8.12□□□□□ -1.11
GAPDHP49-201ENST00000421421 ERCC6L2Q5T890 1561 aa8.12□□□□□ -1.11
GAPDHP49-201ENST00000421421 ABCA10Q8WWZ4 1543 aa8.12□□□□□ -1.11
GAPDHP49-201ENST00000421421 NUP160Q12769 1436 aa8.12□□□□□ -1.11
GAPDHP49-201ENST00000421421 CFHP08603 1231 aa8.11□□□□□ -1.11
GAPDHP49-201ENST00000421421 IRF5Q13568 498 aa8.11□□□□□ -1.11
GAPDHP49-201ENST00000421421 PKDCCQ504Y2 493 aa8.11□□□□□ -1.11
GAPDHP49-201ENST00000421421 TSC1Q92574 1164 aa8.11□□□□□ -1.11
GAPDHP49-201ENST00000421421 HMX1Q9NP08 348 aaPredicted RBP8.11□□□□□ -1.11
GAPDHP49-201ENST00000421421 CFAP99D6REC4 459 aa8.1□□□□□ -1.11
GAPDHP49-201ENST00000421421 C6orf229H3BNL8 230 aa8.1□□□□□ -1.11
GAPDHP49-201ENST00000421421 RNF40O75150 1001 aa8.1□□□□□ -1.11
GAPDHP49-201ENST00000421421 DGAT1O75907 488 aa8.1□□□□□ -1.11
GAPDHP49-201ENST00000421421 TRIM34Q9BYJ4 488 aa8.1□□□□□ -1.11
GAPDHP49-201ENST00000421421 GRIN2AQ12879 1464 aa8.1□□□□□ -1.11
GAPDHP49-201ENST00000421421 ZBTB7CA1YPR0 619 aa8.09□□□□□ -1.11
GAPDHP49-201ENST00000421421 ATP6V1AP38606 617 aa8.09□□□□□ -1.11
GAPDHP49-201ENST00000421421 WASHC4Q2M389 1173 aa8.09□□□□□ -1.11
GAPDHP49-201ENST00000421421 TRIM67Q6ZTA4 783 aa8.09□□□□□ -1.11
GAPDHP49-201ENST00000421421 LRRN4Q8WUT4 740 aa8.09□□□□□ -1.11
GAPDHP49-201ENST00000421421 TRAIPQ9BWF2 469 aa8.09□□□□□ -1.11
GAPDHP49-201ENST00000421421 SLC19A1P41440 591 aa8.07□□□□□ -1.12
GAPDHP49-201ENST00000421421 COPS2P61201 443 aa8.07□□□□□ -1.12
GAPDHP49-201ENST00000421421 KMT5BQ4FZB7 885 aa8.07□□□□□ -1.12
GAPDHP49-201ENST00000421421 HDGFL1Q5TGJ6 251 aa8.07□□□□□ -1.12
GAPDHP49-201ENST00000421421 SYMPKQ92797 1274 aaKnown RBP8.07□□□□□ -1.12
GAPDHP49-201ENST00000421421 CEP170Q5SW79 1584 aa8.06□□□□□ -1.12
GAPDHP49-201ENST00000421421 FHAD1B1AJZ9 1412 aa8.06□□□□□ -1.12
GAPDHP49-201ENST00000421421 WRNQ14191 1432 aaPredicted RBP eCLIP8.06□□□□□ -1.12
GAPDHP49-201ENST00000421421 GPR37L1O60883 481 aa8.06□□□□□ -1.12
GAPDHP49-201ENST00000421421 PPP1R15AO75807 674 aaPredicted RBP8.06□□□□□ -1.12
GAPDHP49-201ENST00000421421 FAM69CQ0P6D2 419 aa8.06□□□□□ -1.12
GAPDHP49-201ENST00000421421 ABCA5Q8WWZ7 1642 aa8.06□□□□□ -1.12
GAPDHP49-201ENST00000421421 PRG4Q92954 1404 aaPredicted RBP8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 POTECB2RU33 542 aa8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 ZPR1O75312 459 aa8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 PRR20EP86478 221 aa8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 PRR20CP86479 221 aa8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 PRR20DP86480 221 aa8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 PRR20BP86481 221 aa8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 PRR20AP86496 221 aa8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 VAC14Q08AM6 782 aa8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 TREML4Q6UXN2 200 aa8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 RETREG2Q8NC44 543 aa8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 PRR7Q8TB68 274 aa8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 ADAMTS19Q8TE59 1207 aa8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 EPS8L1Q8TE68 723 aa8.05□□□□□ -1.12
GAPDHP49-201ENST00000421421 ACIN1Q9UKV3 1341 aaKnown RBP8.03□□□□□ -1.12
GAPDHP49-201ENST00000421421 MORN1Q5T089 497 aa8.03□□□□□ -1.12
GAPDHP49-201ENST00000421421 SPRYD7Q5W111 196 aa8.03□□□□□ -1.12
GAPDHP49-201ENST00000421421 RETREG3Q86VR2 466 aa8.03□□□□□ -1.12
GAPDHP49-201ENST00000421421 ABCC10Q5T3U5 1492 aa8.02□□□□□ -1.13
GAPDHP49-201ENST00000421421 RNF223E7ERA6 249 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms