RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Ciz1Q8VEH2 845 aa27.46■■□□□ 1.99
Trim27-207ENSMUST00000223065 Dusp27Q148W8 1138 aa27.46■■□□□ 1.99
Trim27-207ENSMUST00000223065 PtpruB1AUH1 1446 aa27.45■■□□□ 1.98
Trim27-207ENSMUST00000223065 4930407I10RikD3Z5T8 1512 aa27.44■■□□□ 1.98
Trim27-207ENSMUST00000223065 Znf541Q0GGX2 1363 aa27.43■■□□□ 1.98
Trim27-207ENSMUST00000223065 Slc12a5Q91V14 1138 aa27.43■■□□□ 1.98
Trim27-207ENSMUST00000223065 Mapk8ip3Q9ESN9 1337 aa27.43■■□□□ 1.98
Trim27-207ENSMUST00000223065 Zmym3Q9JLM4 1370 aa27.42■■□□□ 1.98
Trim27-207ENSMUST00000223065 Ttll13A4Q9F6 804 aa27.42■■□□□ 1.98
Trim27-207ENSMUST00000223065 Ksr2Q3UVC0 959 aa27.42■■□□□ 1.98
Trim27-207ENSMUST00000223065 PzpQ61838 1495 aa27.42■■□□□ 1.98
Trim27-207ENSMUST00000223065 Znf316Q6PGE4 1016 aa27.41■■□□□ 1.98
Trim27-207ENSMUST00000223065 Dip2bQ3UH60 1574 aa27.41■■□□□ 1.98
Trim27-207ENSMUST00000223065 HnrnpmQ9D0E1 729 aaKnown RBP27.41■■□□□ 1.98
Trim27-207ENSMUST00000223065 Usp32F8VPZ3 1604 aa27.4■■□□□ 1.98
Trim27-207ENSMUST00000223065 Cavin4A2AMM0 362 aa27.4■■□□□ 1.98
Trim27-207ENSMUST00000223065 Fchsd2Q3USJ8 740 aa27.4■■□□□ 1.98
Trim27-207ENSMUST00000223065 Trim58Q5NCC9 485 aa27.4■■□□□ 1.98
Trim27-207ENSMUST00000223065 Pik3r4Q8VD65 1358 aa27.39■■□□□ 1.97
Trim27-207ENSMUST00000223065 Pik3c2bE9QAN8 1632 aa27.38■■□□□ 1.97
Trim27-207ENSMUST00000223065 Ccar1Q8CH18 1146 aaKnown RBP27.38■■□□□ 1.97
Trim27-207ENSMUST00000223065 CatipB9EKE5 520 aa27.37■■□□□ 1.97
Trim27-207ENSMUST00000223065 Pank1Q8K4K6 548 aa27.37■■□□□ 1.97
Trim27-207ENSMUST00000223065 Uhrf1bp1B2KF50 1429 aa27.37■■□□□ 1.97
Trim27-207ENSMUST00000223065 Znf521Q6KAS7 1311 aa27.37■■□□□ 1.97
Trim27-207ENSMUST00000223065 Ppp1r15aP17564 657 aa27.36■■□□□ 1.97
Trim27-207ENSMUST00000223065 Tspyl2Q7TQI8 677 aa27.36■■□□□ 1.97
Trim27-207ENSMUST00000223065 Sirt1Q923E4 737 aa27.36■■□□□ 1.97
Trim27-207ENSMUST00000223065 Tnrc6bQ8BKI2 1810 aaKnown RBP27.36■■□□□ 1.97
Trim27-207ENSMUST00000223065 Birc3O08863 600 aa27.34■■□□□ 1.97
Trim27-207ENSMUST00000223065 PalmQ9Z0P4 383 aa27.34■■□□□ 1.97
Trim27-207ENSMUST00000223065 Kif1aP33173 1695 aa27.34■■□□□ 1.97
Trim27-207ENSMUST00000223065 PaskQ8CEE6 1383 aa27.34■■□□□ 1.97
Trim27-207ENSMUST00000223065 Fam135bQ9DAI6 1403 aa27.33■■□□□ 1.97
Trim27-207ENSMUST00000223065 Q4VA45 678 aa27.33■■□□□ 1.97
Trim27-207ENSMUST00000223065 Arap3Q8R5G7 1538 aa27.32■■□□□ 1.96
Trim27-207ENSMUST00000223065 Smc5Q8CG46 1101 aaKnown RBP27.32■■□□□ 1.96
Trim27-207ENSMUST00000223065 Polr3glQ8R0C0 218 aa27.31■■□□□ 1.96
Trim27-207ENSMUST00000223065 AampJ3QN89 436 aa27.31■■□□□ 1.96
Trim27-207ENSMUST00000223065 EspnQ9ET47 871 aa27.3■■□□□ 1.96
Trim27-207ENSMUST00000223065 Hoxb7P09024 217 aa27.29■■□□□ 1.96
Trim27-207ENSMUST00000223065 Topaz1E5FYH1 1653 aa27.29■■□□□ 1.96
Trim27-207ENSMUST00000223065 Ttc21aQ8C0S4 1314 aa27.28■■□□□ 1.96
Trim27-207ENSMUST00000223065 Q3UJC8 639 aa27.28■■□□□ 1.96
Trim27-207ENSMUST00000223065 Chmp5Q9D7S9 219 aa27.28■■□□□ 1.96
Trim27-207ENSMUST00000223065 B4galnt3Q6L8S8 986 aa27.28■■□□□ 1.96
Trim27-207ENSMUST00000223065 Trim26Q99PN3 545 aa27.28■■□□□ 1.96
Trim27-207ENSMUST00000223065 Swt1Q9DBQ9 907 aa27.28■■□□□ 1.96
Trim27-207ENSMUST00000223065 Chd4Q6PDQ2 1915 aaKnown RBP27.26■■□□□ 1.95
Trim27-207ENSMUST00000223065 CastP51125 788 aa27.26■■□□□ 1.95
Trim27-207ENSMUST00000223065 Ankrd50F7BE84 1390 aa27.25■■□□□ 1.95
Trim27-207ENSMUST00000223065 Ipo9Q91YE6 1041 aa27.24■■□□□ 1.95
Trim27-207ENSMUST00000223065 Uhrf1bp1lA2RSJ4 1457 aa27.23■■□□□ 1.95
Trim27-207ENSMUST00000223065 Rreb1Q3UH06 1700 aaKnown RBP27.23■■□□□ 1.95
Trim27-207ENSMUST00000223065 Znf335A2A5K6 1337 aa27.23■■□□□ 1.95
Trim27-207ENSMUST00000223065 Atp7bQ64446 1462 aa27.22■■□□□ 1.95
Trim27-207ENSMUST00000223065 N4bp2F8VQG7 1678 aaKnown RBP27.21■■□□□ 1.95
Trim27-207ENSMUST00000223065 Rsph6aQ8CDR2 708 aa27.21■■□□□ 1.95
Trim27-207ENSMUST00000223065 Dbr1Q923B1 550 aa27.21■■□□□ 1.95
Trim27-207ENSMUST00000223065 Duxf3A0A0N4SV92 674 aa27.21■■□□□ 1.95
Trim27-207ENSMUST00000223065 Rbm25B2RY56 838 aaKnown RBP27.2■■□□□ 1.94
Trim27-207ENSMUST00000223065 Spef2Q8C9J3 1734 aa27.19■■□□□ 1.94
Trim27-207ENSMUST00000223065 Astn2Q80Z10 1352 aa27.19■■□□□ 1.94
Trim27-207ENSMUST00000223065 NudcO35685 332 aaKnown RBP27.19■■□□□ 1.94
Trim27-207ENSMUST00000223065 Bcl9Q9D219 1425 aa27.17■■□□□ 1.94
Trim27-207ENSMUST00000223065 Ccdc171E9Q1U1 1324 aa27.16■■□□□ 1.94
Trim27-207ENSMUST00000223065 Lmtk3Q5XJV6 1424 aa27.16■■□□□ 1.94
Trim27-207ENSMUST00000223065 Scn4aQ9ER60 1841 aa27.16■■□□□ 1.94
Trim27-207ENSMUST00000223065 Rlbp1Q9Z275 317 aa27.14■■□□□ 1.93
Trim27-207ENSMUST00000223065 Mdc1Q5PSV9 1707 aa27.13■■□□□ 1.93
Trim27-207ENSMUST00000223065 Ccdc60Q8C4J0 545 aa27.12■■□□□ 1.93
Trim27-207ENSMUST00000223065 D430041D05RikF6ZGR6 1678 aa27.12■■□□□ 1.93
Trim27-207ENSMUST00000223065 GphnQ8BUV3 769 aaKnown RBP27.12■■□□□ 1.93
Trim27-207ENSMUST00000223065 CemipQ8BI06 1361 aa27.11■■□□□ 1.93
Trim27-207ENSMUST00000223065 Kif20bQ80WE4 1774 aaKnown RBP27.1■■□□□ 1.93
Trim27-207ENSMUST00000223065 NgefQ8CHT1 710 aa27.09■■□□□ 1.93
Trim27-207ENSMUST00000223065 Ppp1r3fQ9JIG4 799 aa27.09■■□□□ 1.93
Trim27-207ENSMUST00000223065 G3bp1P97855 465 aaKnown RBP27.08■■□□□ 1.93
Trim27-207ENSMUST00000223065 Med1Q925J9 1575 aa27.08■■□□□ 1.93
Trim27-207ENSMUST00000223065 Abcc10Q8R4P9 1501 aa27.08■■□□□ 1.93
Trim27-207ENSMUST00000223065 Eif4a2P10630 407 aa27.07■■□□□ 1.92
Trim27-207ENSMUST00000223065 Ecm2Q5FW85 670 aa27.07■■□□□ 1.92
Trim27-207ENSMUST00000223065 Cdc37l1Q9CZP7 335 aa27.07■■□□□ 1.92
Trim27-207ENSMUST00000223065 Rims2Q9EQZ7 1530 aa27.07■■□□□ 1.92
Trim27-207ENSMUST00000223065 Idi1P58044 227 aa27.07■■□□□ 1.92
Trim27-207ENSMUST00000223065 Mcm10Q0VBD2 885 aa27.07■■□□□ 1.92
Trim27-207ENSMUST00000223065 NalcnQ8BXR5 1738 aa27.06■■□□□ 1.92
Trim27-207ENSMUST00000223065 Gnai1B2RSH2 354 aa27.06■■□□□ 1.92
Trim27-207ENSMUST00000223065 Gnai3Q9DC51 354 aa27.06■■□□□ 1.92
Trim27-207ENSMUST00000223065 Cabp2Q9JLK4 216 aa27.06■■□□□ 1.92
Trim27-207ENSMUST00000223065 Als2Q920R0 1651 aa27.06■■□□□ 1.92
Trim27-207ENSMUST00000223065 C5P06684 1680 aa27.05■■□□□ 1.92
Trim27-207ENSMUST00000223065 Mon2Q80TL7 1715 aa27.05■■□□□ 1.92
Trim27-207ENSMUST00000223065 Cdk12Q14AX6 1484 aaKnown RBP27.04■■□□□ 1.92
Trim27-207ENSMUST00000223065 Iqcf3Q9D498 203 aa27.04■■□□□ 1.92
Trim27-207ENSMUST00000223065 Gm10563F6WIE4 79 aa27.03■■□□□ 1.92
Trim27-207ENSMUST00000223065 Vamp4O70480 141 aa27.02■■□□□ 1.92
Trim27-207ENSMUST00000223065 Pik3c2aQ61194 1686 aa27.02■■□□□ 1.92
Trim27-207ENSMUST00000223065 Sox12Q04890 314 aa27■■□□□ 1.91
Trim27-207ENSMUST00000223065 Stk31Q99MW1 1018 aa27■■□□□ 1.91
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms