RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

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Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 NischQ80TM9 1593 aa42,37■■■■■ 4,37
Trim27-207ENSMUST00000223065 Gm35339A0A140LHH9 1649 aa41,93■■■■■ 4,3
Trim27-207ENSMUST00000223065 Abcc9P70170 1546 aa41,15■■■■■ 4,18
Trim27-207ENSMUST00000223065 Abcc8B2RUS7 1588 aa40,38■■■■■ 4,06
Trim27-207ENSMUST00000223065 Rhox8Q6VSS7 320 aa38,7■■■■□ 3,79
Trim27-207ENSMUST00000223065 Rtl1Q7M732 1744 aa37,97■■■■□ 3,67
Trim27-207ENSMUST00000223065 ScribQ80U72 1612 aa37,86■■■■□ 3,65
Trim27-207ENSMUST00000223065 Dcaf1Q80TR8 1506 aa37,68■■■■□ 3,62
Trim27-207ENSMUST00000223065 Ccdc180J3QNE4 1664 aa37,16■■■■□ 3,54
Trim27-207ENSMUST00000223065 Rb1cc1Q9ESK9 1588 aa37,08■■■■□ 3,53
Trim27-207ENSMUST00000223065 Kdm5dQ62240 1548 aa37,02■■■■□ 3,52
Trim27-207ENSMUST00000223065 NacadQ5SWP3 1504 aa36,83■■■■□ 3,49
Trim27-207ENSMUST00000223065 Zcchc6Q5BLK4 1491 aaKnown RBP36,71■■■■□ 3,47
Trim27-207ENSMUST00000223065 Baz1aO88379 1555 aa36,67■■■■□ 3,46
Trim27-207ENSMUST00000223065 Crybg2B7ZCC2 1516 aa36,19■■■■□ 3,38
Trim27-207ENSMUST00000223065 Sycp2Q9CUU3 1500 aa36,03■■■■□ 3,36
Trim27-207ENSMUST00000223065 Ccdc136Q3TVA9 1136 aa35,96■■■■□ 3,35
Trim27-207ENSMUST00000223065 Smarca2Q6DIC0 1577 aa35,81■■■■□ 3,32
Trim27-207ENSMUST00000223065 HrcG5E8J6 738 aa35,53■■■■□ 3,28
Trim27-207ENSMUST00000223065 BicraF8VPZ9 1578 aa35,42■■■■□ 3,26
Trim27-207ENSMUST00000223065 Trim41Q5NCC3 630 aa35,37■■■■□ 3,25
Trim27-207ENSMUST00000223065 Cecr2E9Q2Z1 1453 aa35■■■■□ 3,19
Trim27-207ENSMUST00000223065 Brd4Q9ESU6 1400 aaKnown RBP34,94■■■■□ 3,18
Trim27-207ENSMUST00000223065 Synj1Q8CHC4 1574 aa34,64■■■■□ 3,14
Trim27-207ENSMUST00000223065 Cep164Q5DU05 1446 aa34,57■■■■□ 3,13
Trim27-207ENSMUST00000223065 CftrP26361 1476 aa34,51■■■■□ 3,12
Trim27-207ENSMUST00000223065 Golga3P55937 1487 aa34,44■■■■□ 3,1
Trim27-207ENSMUST00000223065 Cngb1E1AZ71 1325 aa34,41■■■■□ 3,1
Trim27-207ENSMUST00000223065 Smarca4Q3TKT4 1613 aaKnown RBP34,38■■■■□ 3,09
Trim27-207ENSMUST00000223065 Cttnbp2B9EJA2 1648 aa34,34■■■■□ 3,09
Trim27-207ENSMUST00000223065 Rsf1E9PWW9 1441 aaKnown RBP34,27■■■■□ 3,08
Trim27-207ENSMUST00000223065 Dnajc5bQ9CQ94 199 aa34,27■■■■□ 3,08
Trim27-207ENSMUST00000223065 Pds5bQ4VA53 1446 aaKnown RBP34,25■■■■□ 3,07
Trim27-207ENSMUST00000223065 Chic1Q8CBW7 227 aa34,2■■■■□ 3,06
Trim27-207ENSMUST00000223065 Rpgrip1Q9EPQ2 1331 aa34,16■■■■□ 3,06
Trim27-207ENSMUST00000223065 Esf1Q3V1V3 845 aaKnown RBP34,16■■■■□ 3,06
Trim27-207ENSMUST00000223065 Ccdc88bQ4QRL3 1481 aa34,11■■■■□ 3,05
Trim27-207ENSMUST00000223065 Top2bQ64511 1612 aa34,11■■■■□ 3,05
Trim27-207ENSMUST00000223065 Atad2bE9Q166 1460 aaKnown RBP33,99■■■■□ 3,03
Trim27-207ENSMUST00000223065 Thoc2B1AZI6 1594 aaKnown RBP33,96■■■■□ 3,03
Trim27-207ENSMUST00000223065 Iqgap2Q3UQ44 1575 aa33,94■■■■□ 3,02
Trim27-207ENSMUST00000223065 Ehmt2Q9Z148 1263 aaKnown RBP33,94■■■■□ 3,02
Trim27-207ENSMUST00000223065 Acin1Q9JIX8 1338 aaKnown RBP33,9■■■■□ 3,02
Trim27-207ENSMUST00000223065 Gab3Q8BSM5 595 aa33,75■■■□□ 2,99
Trim27-207ENSMUST00000223065 Cc2d2aQ8CFW7 1633 aa33,71■■■□□ 2,99
Trim27-207ENSMUST00000223065 Fmn1Q05860 1466 aa33,61■■■□□ 2,97
Trim27-207ENSMUST00000223065 Ercc6F8VPZ5 1481 aa33,55■■■□□ 2,96
Trim27-207ENSMUST00000223065 Top2aQ01320 1528 aaKnown RBP33,38■■■□□ 2,93
Trim27-207ENSMUST00000223065 Frmpd1A2AKB4 1549 aa33,33■■■□□ 2,93
Trim27-207ENSMUST00000223065 Wdr62Q3U3T8 1523 aa33,33■■■□□ 2,93
Trim27-207ENSMUST00000223065 Rapgef2Q8CHG7 1496 aa33,24■■■□□ 2,91
Trim27-207ENSMUST00000223065 Fam135aQ6NS59 1506 aa33,2■■■□□ 2,9
Trim27-207ENSMUST00000223065 TnnQ80Z71 1560 aa33,19■■■□□ 2,9
Trim27-207ENSMUST00000223065 Lamc3Q9R0B6 1581 aa33■■■□□ 2,87
Trim27-207ENSMUST00000223065 Phldb1Q6PDH0 1371 aaKnown RBP32,99■■■□□ 2,87
Trim27-207ENSMUST00000223065 Cep162Q6ZQ06 1403 aa32,96■■■□□ 2,87
Trim27-207ENSMUST00000223065 Unc13aQ4KUS2 1712 aa32,94■■■□□ 2,86
Trim27-207ENSMUST00000223065 Kif15Q6P9L6 1387 aa32,84■■■□□ 2,85
Trim27-207ENSMUST00000223065 Npm2Q80W85 207 aa32,76■■■□□ 2,83
Trim27-207ENSMUST00000223065 Eif4g1Q6NZJ6 1600 aaKnown RBP32,75■■■□□ 2,83
Trim27-207ENSMUST00000223065 Ubl4bQ9CQ84 188 aa32,73■■■□□ 2,83
Trim27-207ENSMUST00000223065 Myt1lP97500 1187 aa32,66■■■□□ 2,82
Trim27-207ENSMUST00000223065 Camsap1A2AHC3 1581 aa32,65■■■□□ 2,82
Trim27-207ENSMUST00000223065 Baz1bQ9Z277 1479 aa32,61■■■□□ 2,81
Trim27-207ENSMUST00000223065 NrkQ9R0G8 1455 aa32,58■■■□□ 2,81
Trim27-207ENSMUST00000223065 PtprkP35822 1457 aa32,58■■■□□ 2,81
Trim27-207ENSMUST00000223065 Il27Q8K3I6 234 aa32,56■■■□□ 2,8
Trim27-207ENSMUST00000223065 Ccdc18Q640L5 1455 aa32,52■■■□□ 2,8
Trim27-207ENSMUST00000223065 Arhgap35Q91YM2 1499 aa32,51■■■□□ 2,79
Trim27-207ENSMUST00000223065 Mier1Q5UAK0 511 aa32,51■■■□□ 2,79
Trim27-207ENSMUST00000223065 Shroom4Q1W617 1475 aa32,48■■■□□ 2,79
Trim27-207ENSMUST00000223065 Mrc2Q64449 1479 aa32,44■■■□□ 2,78
Trim27-207ENSMUST00000223065 Grin2bQ01097 1482 aa32,42■■■□□ 2,78
Trim27-207ENSMUST00000223065 Clip1Q922J3 1391 aa32,37■■■□□ 2,77
Trim27-207ENSMUST00000223065 Cux2P70298 1426 aa32,36■■■□□ 2,77
Trim27-207ENSMUST00000223065 NefmP08553 848 aa32,33■■■□□ 2,77
Trim27-207ENSMUST00000223065 Map3k1P53349 1493 aa32,3■■■□□ 2,76
Trim27-207ENSMUST00000223065 UbtfP25976 765 aaKnown RBP32,29■■■□□ 2,76
Trim27-207ENSMUST00000223065 Npm1Q61937 292 aaKnown RBP32,21■■■□□ 2,75
Trim27-207ENSMUST00000223065 Mroh2bQ7M6Y6 1581 aa32,17■■■□□ 2,74
Trim27-207ENSMUST00000223065 Eea1Q8BL66 1411 aa32,16■■■□□ 2,74
Trim27-207ENSMUST00000223065 LrpprcQ6PB66 1392 aaKnown RBP32,11■■■□□ 2,73
Trim27-207ENSMUST00000223065 Efcab5A0JP43 1406 aa32,1■■■□□ 2,73
Trim27-207ENSMUST00000223065 Pcgf6Q99NA9 353 aa32,1■■■□□ 2,73
Trim27-207ENSMUST00000223065 Zeb1Q64318 1117 aa32,05■■■□□ 2,72
Trim27-207ENSMUST00000223065 Arap1Q4LDD4 1452 aa32,05■■■□□ 2,72
Trim27-207ENSMUST00000223065 Plekhg3Q4VAC9 1341 aa32,04■■■□□ 2,72
Trim27-207ENSMUST00000223065 PogzQ8BZH4 1409 aaKnown RBP32,04■■■□□ 2,72
Trim27-207ENSMUST00000223065 Setd5Q5XJV7 1441 aa32,02■■■□□ 2,72
Trim27-207ENSMUST00000223065 AqrQ8CFQ3 1481 aaKnown RBP32,01■■■□□ 2,71
Trim27-207ENSMUST00000223065 Duox2A2AQ99 1517 aa31,97■■■□□ 2,71
Trim27-207ENSMUST00000223065 Arhgef5E9Q7D5 1581 aa31,97■■■□□ 2,71
Trim27-207ENSMUST00000223065 Erich3F6QRE9 1637 aa31,86■■■□□ 2,69
Trim27-207ENSMUST00000223065 Kif21aQ9QXL2 1672 aa31,85■■■□□ 2,69
Trim27-207ENSMUST00000223065 Ankrd26Q811D2 1581 aa31,85■■■□□ 2,69
Trim27-207ENSMUST00000223065 Carmil1Q6EDY6 1374 aa31,84■■■□□ 2,69
Trim27-207ENSMUST00000223065 Dhx29Q6PGC1 1365 aaKnown RBP31,82■■■□□ 2,68
Trim27-207ENSMUST00000223065 Ap3b1Q9Z1T1 1105 aa31,81■■■□□ 2,68
Trim27-207ENSMUST00000223065 Ncapd3Q6ZQK0 1506 aa31,81■■■□□ 2,68
Trim27-207ENSMUST00000223065 Supt5hO55201 1082 aaKnown RBP31,79■■■□□ 2,68
Retrieved 100 of 22,080 RNA–protein pairs in 10,9 ms