RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Sptbn5F6UCX4 1208 aa11.53□□□□□ -0.56
Ldlr-202ENSMUST00000213114 Abca16E9PWJ7 1678 aa11.53□□□□□ -0.56
Ldlr-202ENSMUST00000213114 MsnP26041 577 aaKnown RBP11.52□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Fkbp4P30416 458 aa11.52□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Mcm10Q0VBD2 885 aa11.52□□□□□ -0.57
Ldlr-202ENSMUST00000213114 GphnQ8BUV3 769 aaKnown RBP11.52□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Anapc15P60007 132 aa11.51□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Nol12Q8BG17 217 aa11.51□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Aldh1l1Q8R0Y6 902 aa11.51□□□□□ -0.57
Ldlr-202ENSMUST00000213114 4933402E13RikQ9D4D2 429 aa11.51□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Map3k4O08648 1597 aa11.51□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Mcm2P97310 904 aa11.51□□□□□ -0.57
Ldlr-202ENSMUST00000213114 CarsQ9ER72 831 aaKnown RBP11.51□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Q3UJC8 639 aa11.51□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Mphosph10Q810V0 681 aaKnown RBP11.51□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Q3UPC7 1272 aa11.51□□□□□ -0.57
Ldlr-202ENSMUST00000213114 MvpQ9EQK5 861 aa11.51□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Ppp1r15aP17564 657 aa11.5□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Neurod6P48986 337 aa11.5□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Rrbp1Q99PL5 1605 aaKnown RBP11.5□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Gnai2P08752 355 aaKnown RBP11.5□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Adam1bQ8R534 806 aa11.5□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Tfip11Q9ERA6 838 aaKnown RBP11.5□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Stk3Q9JI10 497 aa11.5□□□□□ -0.57
Ldlr-202ENSMUST00000213114 AlkP97793 1621 aa11.5□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Adgrl2Q8JZZ7 1487 aa11.5□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Fmnl2A2APV2 1086 aa11.5□□□□□ -0.57
Ldlr-202ENSMUST00000213114 PogkQ80TC5 607 aa11.5□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Lrrc9Q8CDN9 1456 aa11.5□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Erbb3Q61526 1339 aa11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Cwc27Q3TKY6 469 aa11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Ddrgk1Q80WW9 315 aa11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Smc4Q8CG47 1286 aa11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 TnikP83510 1323 aa11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Atf7ipQ7TT18 1306 aa11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Zkscan2G3X952 960 aa11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 CastP51125 788 aa11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Gas2l2Q5SSG4 860 aa11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Gcc1Q9D4H2 778 aa11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Nphp1Q9QY53 687 aa11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Gm21698A0A087WQP8 267 aa11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Gm21671G3UY31 267 aa11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Ddx54Q8K4L0 874 aaKnown RBP11.49□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Q8C5K5 320 aa11.48□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Aplp1Q03157 653 aa11.48□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Zpr1Q62384 459 aa11.48□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Duxf3A0A0N4SV92 674 aa11.48□□□□□ -0.57
Ldlr-202ENSMUST00000213114 1700010I14RikQ7TPG0 532 aa11.48□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Srgap3Q812A2 1099 aa11.48□□□□□ -0.57
Ldlr-202ENSMUST00000213114 R3hcc1Q8BSI6 488 aa11.48□□□□□ -0.57
Ldlr-202ENSMUST00000213114 KinQ8K339 391 aa11.47□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Abcc2Q8VI47 1543 aa11.47□□□□□ -0.57
Ldlr-202ENSMUST00000213114 NinlQ6ZQ12 1394 aa11.46□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Gm10563F6WIE4 79 aa11.46□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Sf3a1Q8K4Z5 791 aaKnown RBP11.46□□□□□ -0.57
Ldlr-202ENSMUST00000213114 Pdcl3Q8BVF2 240 aa11.46□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Map3k13Q1HKZ5 959 aa11.46□□□□□ -0.58
Ldlr-202ENSMUST00000213114 BcanQ61361 883 aa11.46□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Gimap6Q8K349 305 aa11.46□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Abcc6Q9R1S7 1498 aa11.45□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Smarca5Q91ZW3 1051 aaKnown RBP11.45□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Arhgef11Q68FM7 1552 aa11.45□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Erc2Q6PH08 957 aa11.45□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Ppp1r9bQ6R891 817 aaKnown RBP11.45□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Ssh1Q76I79 1042 aa11.45□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Cnnm1Q0GA42 951 aa11.45□□□□□ -0.58
Ldlr-202ENSMUST00000213114 VgfQ0VGU4 617 aa11.45□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Smc3Q9CW03 1217 aaKnown RBP11.45□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Prkar2bP31324 416 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Ccne1Q61457 408 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Gcc2Q8CHG3 1679 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 PsapQ61207 557 aaKnown RBP11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Klhdc4Q921I2 584 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 GnpatP98192 678 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Ddx11Q6AXC6 880 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Rnf214Q8BFU3 668 aaKnown RBP11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Jakmip1Q8BVL9 626 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Glipr1l2Q9CQ35 332 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Ccer1Q9CQL2 403 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 InsrP15208 1372 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Exoc6bA6H5Z3 810 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Nap1l3Q794H2 544 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Egfem1Q8C088 590 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Gripap1Q8VD04 806 aa11.44□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Wwc1Q5SXA9 1104 aa11.43□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Ppip5k2Q6ZQB6 1129 aa11.43□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Idi2Q8BFZ6 227 aa11.43□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Sos1Q62245 1319 aa11.43□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Sbno1Q689Z5 1390 aa11.43□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Gpatch11Q3UFS4 262 aa11.43□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Gm973E9Q295 1059 aa11.43□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Usp48Q3V0C5 1052 aa11.43□□□□□ -0.58
Ldlr-202ENSMUST00000213114 IbspQ61711 324 aa11.42□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Polr3gQ6NXY9 223 aa11.42□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Zkscan1Q8BGS3 561 aaKnown RBP11.42□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Ipo4Q8VI75 1082 aa11.42□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Utp3Q9JI13 469 aaKnown RBP11.42□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Sh3bgrQ9WUZ7 214 aa11.42□□□□□ -0.58
Ldlr-202ENSMUST00000213114 Cfap74Q3UY96 1578 aa11.42□□□□□ -0.58
Ldlr-202ENSMUST00000213114 AatkQ80YE4 1365 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms