RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Gas2l2Q5SSG4 860 aa13.51□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Tsen2Q6P7W5 460 aa13.51□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Abca14E9Q8F8 1683 aa13.51□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Nom1Q3UFM5 854 aaKnown RBP13.51□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Plppr3Q7TPB0 716 aa13.51□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Apaf1O88879 1249 aa13.5□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Atxn3Q9CVD2 355 aa13.5□□□□□ -0.25
Ptpre-208ENSMUST00000211788 NinlQ6ZQ12 1394 aa13.5□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Psme1P97371 249 aa13.5□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Txndc2Q6P902 515 aa13.5□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Dnajc5gQ8C632 165 aa13.5□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Plekhg1F6S200 1446 aa13.49□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Tex2Q6ZPJ0 1128 aaKnown RBP13.48□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Iqsec2Q5DU25 1478 aa13.48□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Zc3h13E9Q784 1729 aaKnown RBP13.48□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Adgrl1Q80TR1 1466 aa13.48□□□□□ -0.25
Ptpre-208ENSMUST00000211788 FanciQ8K368 1330 aa13.47□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Rbm10Q99KG3 930 aaKnown RBP13.47□□□□□ -0.25
Ptpre-208ENSMUST00000211788 NktrP30415 1453 aa13.47□□□□□ -0.25
Ptpre-208ENSMUST00000211788 Med14A2ABV5 1459 aaKnown RBP13.46□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Polr3glQ8R0C0 218 aa13.45□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Dip2aQ8BWT5 1523 aa13.44□□□□□ -0.26
Ptpre-208ENSMUST00000211788 PplQ9R269 1755 aa13.44□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Map3k19E9Q3S4 1311 aa13.44□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Nwd1A6H603 1563 aa13.43□□□□□ -0.26
Ptpre-208ENSMUST00000211788 B4galnt3Q6L8S8 986 aa13.43□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Kdm2bQ6P1G2 1309 aa13.43□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Trim26Q99PN3 545 aa13.42□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Ttll13A4Q9F6 804 aa13.42□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Ythdc1E9Q5K9 736 aaKnown RBP13.42□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Ksr2Q3UVC0 959 aa13.42□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Taok2Q6ZQ29 1240 aa13.42□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Safb2Q80YR5 991 aaKnown RBP13.42□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Mapk8ip3Q9ESN9 1337 aa13.41□□□□□ -0.26
Ptpre-208ENSMUST00000211788 IghaA0A0A6YXW6 389 aa13.41□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Nkx1-2P42580 305 aa13.41□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Tspyl2Q7TQI8 677 aa13.41□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Pank1Q8K4K6 548 aa13.41□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Dusp27Q148W8 1138 aa13.41□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Birc3O08863 600 aa13.4□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Ecm2Q5FW85 670 aa13.4□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Dbr1Q923B1 550 aa13.4□□□□□ -0.26
Ptpre-208ENSMUST00000211788 Slc12a5Q91V14 1138 aa13.38□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Adamtsl3G3UXC7 1706 aa13.37□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Trim58Q5NCC9 485 aa13.37□□□□□ -0.27
Ptpre-208ENSMUST00000211788 HnrnpmQ9D0E1 729 aaKnown RBP13.37□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Fam43aQ8BUP8 424 aa13.36□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Ccar1Q8CH18 1146 aaKnown RBP13.36□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Chmp5Q9D7S9 219 aa13.36□□□□□ -0.27
Ptpre-208ENSMUST00000211788 PalmQ9Z0P4 383 aa13.36□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Rrp12Q6P5B0 1295 aaKnown RBP13.36□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Zmym3Q9JLM4 1370 aa13.36□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Chd2E9PZM4 1827 aaKnown RBP13.36□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Cavin4A2AMM0 362 aa13.35□□□□□ -0.27
Ptpre-208ENSMUST00000211788 ChgaP26339 463 aaKnown RBP13.35□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Tpm2P58774 284 aa13.35□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Idi2Q8BFZ6 227 aa13.35□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Gemin5Q8BX17 1502 aaKnown RBP13.35□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Ppm1gQ61074 542 aa13.35□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Trim28Q62318 834 aa13.35□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Ncbp3Q8BZR9 615 aaKnown RBP13.35□□□□□ -0.27
Ptpre-208ENSMUST00000211788 EspnQ9ET47 871 aa13.35□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Smc5Q8CG46 1101 aaKnown RBP13.34□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Armcx1Q9CX83 456 aa13.34□□□□□ -0.27
Ptpre-208ENSMUST00000211788 Dip2bQ3UH60 1574 aa13.33□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Ciz1Q8VEH2 845 aa13.33□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Cps1Q8C196 1500 aa13.32□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Slit3Q9WVB4 1523 aa13.32□□□□□ -0.28
Ptpre-208ENSMUST00000211788 PtpruB1AUH1 1446 aa13.32□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Dnai1Q8C0M8 701 aa13.32□□□□□ -0.28
Ptpre-208ENSMUST00000211788 PzpQ61838 1495 aa13.32□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Znf521Q6KAS7 1311 aa13.32□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Pik3c2bE9QAN8 1632 aa13.32□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Fam135bQ9DAI6 1403 aa13.32□□□□□ -0.28
Ptpre-208ENSMUST00000211788 CanxP35564 591 aaKnown RBP13.31□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Ppp1r15aP17564 657 aa13.31□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Rangap1P46061 589 aaKnown RBP13.31□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Fchsd2Q3USJ8 740 aa13.31□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Htatsf1Q8BGC0 757 aa13.31□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Usp32F8VPZ3 1604 aa13.31□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Q4VA45 678 aa13.3□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Pik3r4Q8VD65 1358 aa13.3□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Uhrf1bp1lA2RSJ4 1457 aa13.3□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Duxf3A0A0N4SV92 674 aa13.3□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Rbm25B2RY56 838 aaKnown RBP13.3□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Swt1Q9DBQ9 907 aa13.3□□□□□ -0.28
Ptpre-208ENSMUST00000211788 PaskQ8CEE6 1383 aa13.3□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Uhrf1bp1B2KF50 1429 aa13.3□□□□□ -0.28
Ptpre-208ENSMUST00000211788 CastP51125 788 aa13.29□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Sart3Q9JLI8 962 aaKnown RBP13.29□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Ankrd50F7BE84 1390 aa13.29□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Q3UJC8 639 aa13.29□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Ttc21aQ8C0S4 1314 aa13.29□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Kif1aP33173 1695 aa13.29□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Znf541Q0GGX2 1363 aa13.28□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Clcn1Q64347 994 aa13.28□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Ccdc60Q8C4J0 545 aa13.28□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Ppp1r3fQ9JIG4 799 aa13.28□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Rlbp1Q9Z275 317 aa13.28□□□□□ -0.28
Ptpre-208ENSMUST00000211788 Tnrc6bQ8BKI2 1810 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms