RNA–Protein interactions for RNA: ENSMUST00000210369.1

Ssbp4-205, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

TSL 2 BASIC

Gene Ssbp4, Length 1,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-205ENSMUST00000210369 1700123L14RikQ3V2K7 440 aa31.15■■■□□ 2.58
Ssbp4-205ENSMUST00000210369 Fbxo41Q6NS60 873 aa31.15■■■□□ 2.58
Ssbp4-205ENSMUST00000210369 Unc13bQ9Z1N9 1602 aa31.14■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Plekhh1Q80TI1 1356 aa31.13■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Hspa1lP16627 641 aa31.13■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Slain2Q8CI08 581 aa31.13■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Znf541Q0GGX2 1363 aa31.13■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Amigo3Q8C2S7 508 aa31.12■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Erbb3Q61526 1339 aa31.12■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 C5P06684 1680 aa31.12■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Tmem94Q7TSH8 1360 aa31.11■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Evi5lH3BKQ3 813 aa31.11■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Hoxb7P09024 217 aa31.11■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Speer4f1Q9D5Q6 258 aa31.11■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 SafbD3YXK2 937 aaKnown RBP31.1■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Tsen2Q6P7W5 460 aa31.1■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Bcl11bQ99PV8 884 aa31.1■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Mon2Q80TL7 1715 aa31.1■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Als2Q920R0 1651 aa31.09■■■□□ 2.57
Ssbp4-205ENSMUST00000210369 Col14a1Q80X19 1797 aa31.07■■■□□ 2.56
Ssbp4-205ENSMUST00000210369 Astn2Q80Z10 1352 aa31.07■■■□□ 2.56
Ssbp4-205ENSMUST00000210369 Abcc10Q8R4P9 1501 aa31.07■■■□□ 2.56
Ssbp4-205ENSMUST00000210369 Ciz1Q8VEH2 845 aa31.07■■■□□ 2.56
Ssbp4-205ENSMUST00000210369 Trim28Q62318 834 aa31.06■■■□□ 2.56
Ssbp4-205ENSMUST00000210369 Znf316Q6PGE4 1016 aa31.06■■■□□ 2.56
Ssbp4-205ENSMUST00000210369 Mdc1Q5PSV9 1707 aa31.06■■■□□ 2.56
Ssbp4-205ENSMUST00000210369 U2af1Q9D883 239 aaKnown RBP31.05■■■□□ 2.56
Ssbp4-205ENSMUST00000210369 Fam135bQ9DAI6 1403 aa31.05■■■□□ 2.56
Ssbp4-205ENSMUST00000210369 Ccdc30Q8BVF4 654 aa31.05■■■□□ 2.56
Ssbp4-205ENSMUST00000210369 Brinp3Q499E0 766 aa31.02■■■□□ 2.56
Ssbp4-205ENSMUST00000210369 CenpbP27790 599 aa31.01■■■□□ 2.55
Ssbp4-205ENSMUST00000210369 Ppp1r15aP17564 657 aa30.98■■■□□ 2.55
Ssbp4-205ENSMUST00000210369 NalcnQ8BXR5 1738 aa30.98■■■□□ 2.55
Ssbp4-205ENSMUST00000210369 Fchsd2Q3USJ8 740 aa30.96■■■□□ 2.55
Ssbp4-205ENSMUST00000210369 Mbd3Q9Z2D8 285 aaKnown RBP30.96■■■□□ 2.55
Ssbp4-205ENSMUST00000210369 C3P01027 1663 aa30.95■■■□□ 2.55
Ssbp4-205ENSMUST00000210369 CemipQ8BI06 1361 aa30.95■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 Gm10563F6WIE4 79 aa30.94■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 Chd4Q6PDQ2 1915 aaKnown RBP30.94■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 Atf3Q60765 181 aa30.94■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 Mapk8ip3Q9ESN9 1337 aa30.93■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 Ecm2Q5FW85 670 aa30.93■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 Uhrf1bp1B2KF50 1429 aa30.92■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 Rwdd1Q9CQK7 243 aa30.92■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 NeflP08551 543 aa30.91■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 PaskQ8CEE6 1383 aa30.91■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 Scaf1Q5U4C3 1256 aaKnown RBP30.91■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 Neurod2Q62414 383 aa30.9■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 Cdk12Q14AX6 1484 aaKnown RBP30.9■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 Anp32aO35381 247 aa30.89■■■□□ 2.54
Ssbp4-205ENSMUST00000210369 Birc3O08863 600 aa30.89■■■□□ 2.53
Ssbp4-205ENSMUST00000210369 Idi1P58044 227 aa30.89■■■□□ 2.53
Ssbp4-205ENSMUST00000210369 Wdr43Q6ZQL4 677 aaKnown RBP30.89■■■□□ 2.53
Ssbp4-205ENSMUST00000210369 Col16a1Q8BLX7 1580 aa30.87■■■□□ 2.53
Ssbp4-205ENSMUST00000210369 Slc12a5Q91V14 1138 aa30.87■■■□□ 2.53
Ssbp4-205ENSMUST00000210369 Pik3c2aQ61194 1686 aa30.86■■■□□ 2.53
Ssbp4-205ENSMUST00000210369 Cavin4A2AMM0 362 aa30.86■■■□□ 2.53
Ssbp4-205ENSMUST00000210369 Ap3b2Q9JME5 1082 aa30.86■■■□□ 2.53
Ssbp4-205ENSMUST00000210369 Spef2Q8C9J3 1734 aa30.85■■■□□ 2.53
Ssbp4-205ENSMUST00000210369 Apaf1O88879 1249 aa30.84■■■□□ 2.53
Ssbp4-205ENSMUST00000210369 TnikP83510 1323 aa30.84■■■□□ 2.53
Ssbp4-205ENSMUST00000210369 Zfp777B9EKF4 885 aa30.83■■■□□ 2.53
Ssbp4-205ENSMUST00000210369 Gimap5Q8BWF2 308 aa30.83■■■□□ 2.53
Ssbp4-205ENSMUST00000210369 Scn7aB1AYL1 1681 aa30.82■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 Sipa1l2Q80TE4 1722 aa30.81■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 NgefQ8CHT1 710 aa30.81■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 Uhrf1bp1lA2RSJ4 1457 aa30.81■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 Tom1O88746 492 aa30.8■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 Sox12Q04890 314 aa30.8■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 Ubr1O70481 1757 aa30.8■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 Gm38655A0A286YDK6 273 aa30.8■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 Prkrip1Q9CWV6 186 aaKnown RBP30.8■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 PalmQ9Z0P4 383 aa30.79■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 Dusp27Q148W8 1138 aa30.77■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 Rad17Q6NXW6 688 aa30.77■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 Rsph6aQ8CDR2 708 aa30.77■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 Atp7bQ64446 1462 aa30.76■■■□□ 2.52
Ssbp4-205ENSMUST00000210369 Tcerg1Q8CGF7 1100 aaKnown RBP30.75■■■□□ 2.51
Ssbp4-205ENSMUST00000210369 Q4VA45 678 aa30.72■■■□□ 2.51
Ssbp4-205ENSMUST00000210369 Ttll13A4Q9F6 804 aa30.71■■■□□ 2.51
Ssbp4-205ENSMUST00000210369 Frmpd2A0A140LI67 1392 aa30.71■■■□□ 2.51
Ssbp4-205ENSMUST00000210369 Ccar1Q8CH18 1146 aaKnown RBP30.7■■■□□ 2.51
Ssbp4-205ENSMUST00000210369 Atxn3Q9CVD2 355 aa30.7■■■□□ 2.51
Ssbp4-205ENSMUST00000210369 Swt1Q9DBQ9 907 aa30.7■■■□□ 2.51
Ssbp4-205ENSMUST00000210369 Map2P20357 1828 aa30.7■■■□□ 2.51
Ssbp4-205ENSMUST00000210369 Tmem2Q5FWI3 1383 aa30.7■■■□□ 2.51
Ssbp4-205ENSMUST00000210369 Ppp4r2Q0VGB7 417 aa30.69■■■□□ 2.5
Ssbp4-205ENSMUST00000210369 Wnk3Q80XP9 1757 aa30.67■■■□□ 2.5
Ssbp4-205ENSMUST00000210369 Dennd6aQ8BH65 605 aa30.67■■■□□ 2.5
Ssbp4-205ENSMUST00000210369 Kcna6Q61923 529 aa30.66■■■□□ 2.5
Ssbp4-205ENSMUST00000210369 Iqcf3Q9D498 203 aa30.65■■■□□ 2.5
Ssbp4-205ENSMUST00000210369 Ttc21aQ8C0S4 1314 aa30.65■■■□□ 2.5
Ssbp4-205ENSMUST00000210369 AampJ3QN89 436 aa30.64■■■□□ 2.5
Ssbp4-205ENSMUST00000210369 NudcO35685 332 aaKnown RBP30.63■■■□□ 2.49
Ssbp4-205ENSMUST00000210369 Ksr2Q3UVC0 959 aa30.63■■■□□ 2.49
Ssbp4-205ENSMUST00000210369 Farp2Q91VS8 1065 aa30.63■■■□□ 2.49
Ssbp4-205ENSMUST00000210369 Camta1A2A891 1682 aa30.63■■■□□ 2.49
Ssbp4-205ENSMUST00000210369 Ankrd50F7BE84 1390 aa30.62■■■□□ 2.49
Ssbp4-205ENSMUST00000210369 Eif4a2P10630 407 aa30.61■■■□□ 2.49
Ssbp4-205ENSMUST00000210369 GnpatP98192 678 aa30.61■■■□□ 2.49
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms