RNA–Protein interactions for RNA: ENSMUST00000160629.7

Cpsf4-205, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Cpsf4, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-205ENSMUST00000160629 Atf3Q60765 181 aa31.27■■■□□ 2.6
Cpsf4-205ENSMUST00000160629 Gimap5Q8BWF2 308 aa31.27■■■□□ 2.6
Cpsf4-205ENSMUST00000160629 Tmem2Q5FWI3 1383 aa31.25■■■□□ 2.59
Cpsf4-205ENSMUST00000160629 Hoxb7P09024 217 aa31.24■■■□□ 2.59
Cpsf4-205ENSMUST00000160629 Sipa1l2Q80TE4 1722 aa31.23■■■□□ 2.59
Cpsf4-205ENSMUST00000160629 Mak16Q8BGS0 296 aaKnown RBP31.18■■■□□ 2.58
Cpsf4-205ENSMUST00000160629 Scaf1Q5U4C3 1256 aaKnown RBP31.17■■■□□ 2.58
Cpsf4-205ENSMUST00000160629 CemipQ8BI06 1361 aa31.16■■■□□ 2.58
Cpsf4-205ENSMUST00000160629 Camta1A2A891 1682 aa31.16■■■□□ 2.58
Cpsf4-205ENSMUST00000160629 Ttll13A4Q9F6 804 aa31.15■■■□□ 2.58
Cpsf4-205ENSMUST00000160629 GsdmaQ9EST1 446 aa31.14■■■□□ 2.58
Cpsf4-205ENSMUST00000160629 Kcna6Q61923 529 aa31.13■■■□□ 2.57
Cpsf4-205ENSMUST00000160629 Wnk3Q80XP9 1757 aa31.12■■■□□ 2.57
Cpsf4-205ENSMUST00000160629 Cdk12Q14AX6 1484 aaKnown RBP31.11■■■□□ 2.57
Cpsf4-205ENSMUST00000160629 Col16a1Q8BLX7 1580 aa31.11■■■□□ 2.57
Cpsf4-205ENSMUST00000160629 Frmpd2A0A140LI67 1392 aa31.11■■■□□ 2.57
Cpsf4-205ENSMUST00000160629 Kiaa1107Q80TK0 1369 aa31.1■■■□□ 2.57
Cpsf4-205ENSMUST00000160629 Birc3O08863 600 aa31.09■■■□□ 2.57
Cpsf4-205ENSMUST00000160629 Znf710Q3U288 666 aa31.09■■■□□ 2.57
Cpsf4-205ENSMUST00000160629 Trim28Q62318 834 aa31.09■■■□□ 2.57
Cpsf4-205ENSMUST00000160629 P2rx7Q9Z1M0 595 aa31.09■■■□□ 2.57
Cpsf4-205ENSMUST00000160629 Chd4Q6PDQ2 1915 aaKnown RBP31.09■■■□□ 2.57
Cpsf4-205ENSMUST00000160629 Wdr17E9Q271 1322 aa31.06■■■□□ 2.56
Cpsf4-205ENSMUST00000160629 Esx1O88933 382 aa31.06■■■□□ 2.56
Cpsf4-205ENSMUST00000160629 Farp2Q91VS8 1065 aa31.06■■■□□ 2.56
Cpsf4-205ENSMUST00000160629 Mdc1Q5PSV9 1707 aa31.05■■■□□ 2.56
Cpsf4-205ENSMUST00000160629 Ppp1r15aP17564 657 aa31.04■■■□□ 2.56
Cpsf4-205ENSMUST00000160629 Dennd6aQ8BH65 605 aa31.04■■■□□ 2.56
Cpsf4-205ENSMUST00000160629 Fyb1O35601 819 aa31.02■■■□□ 2.56
Cpsf4-205ENSMUST00000160629 Tsen2Q6P7W5 460 aa31.02■■■□□ 2.56
Cpsf4-205ENSMUST00000160629 Gimap6Q8K349 305 aa31.02■■■□□ 2.56
Cpsf4-205ENSMUST00000160629 Map4k4P97820 1233 aaKnown RBP31.01■■■□□ 2.56
Cpsf4-205ENSMUST00000160629 Ofd1Q80Z25 1017 aa31.01■■■□□ 2.56
Cpsf4-205ENSMUST00000160629 Golga2Q921M4 999 aa31.01■■■□□ 2.56
Cpsf4-205ENSMUST00000160629 Fam135bQ9DAI6 1403 aa31■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 TimelessQ9R1X4 1197 aa30.99■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 Slc5a4bQ91ZP4 660 aa30.98■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 Rad17Q6NXW6 688 aa30.98■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 Anks4bQ8K3X6 423 aa30.98■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 Nlgn1Q99K10 843 aa30.98■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 DccP70211 1447 aa30.98■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 Ubr1O70481 1757 aa30.97■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 Zfp142G5E869 1843 aa30.97■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 Qtrt2B8ZXI1 415 aa30.97■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 Ncoa4Q5U4H9 625 aa30.97■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 Slc35g1Q8BY79 368 aa30.97■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 U2af1Q9D883 239 aaKnown RBP30.97■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 Gm21190A0A0G2JGJ6 266 aa30.96■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 Kif24Q6NWW5 1356 aa30.95■■■□□ 2.55
Cpsf4-205ENSMUST00000160629 Scn7aB1AYL1 1681 aa30.94■■■□□ 2.54
Cpsf4-205ENSMUST00000160629 GnpatP98192 678 aa30.93■■■□□ 2.54
Cpsf4-205ENSMUST00000160629 Ncapd2Q8K2Z4 1392 aa30.93■■■□□ 2.54
Cpsf4-205ENSMUST00000160629 Zfp777B9EKF4 885 aa30.92■■■□□ 2.54
Cpsf4-205ENSMUST00000160629 Ano8Q6PB70 1060 aa30.92■■■□□ 2.54
Cpsf4-205ENSMUST00000160629 Cabp4Q8VHC5 271 aa30.92■■■□□ 2.54
Cpsf4-205ENSMUST00000160629 Nyap1Q6PFX7 833 aa30.91■■■□□ 2.54
Cpsf4-205ENSMUST00000160629 Slc12a5Q91V14 1138 aa30.91■■■□□ 2.54
Cpsf4-205ENSMUST00000160629 Usp19Q3UJD6 1360 aa30.9■■■□□ 2.54
Cpsf4-205ENSMUST00000160629 Tnnt3Q9QZ47 272 aa30.89■■■□□ 2.54
Cpsf4-205ENSMUST00000160629 Ddx17Q501J6 650 aaKnown RBP30.88■■■□□ 2.53
Cpsf4-205ENSMUST00000160629 Fchsd2Q3USJ8 740 aa30.87■■■□□ 2.53
Cpsf4-205ENSMUST00000160629 Map2P20357 1828 aa30.87■■■□□ 2.53
Cpsf4-205ENSMUST00000160629 Uspl1Q3ULM6 1089 aa30.87■■■□□ 2.53
Cpsf4-205ENSMUST00000160629 Uhrf1bp1lA2RSJ4 1457 aa30.85■■■□□ 2.53
Cpsf4-205ENSMUST00000160629 Ncbp3Q8BZR9 615 aaKnown RBP30.85■■■□□ 2.53
Cpsf4-205ENSMUST00000160629 Kcnh5Q920E3 988 aa30.85■■■□□ 2.53
Cpsf4-205ENSMUST00000160629 FancaQ9JL70 1439 aa30.84■■■□□ 2.53
Cpsf4-205ENSMUST00000160629 Rsph6aQ8CDR2 708 aa30.84■■■□□ 2.53
Cpsf4-205ENSMUST00000160629 Znf541Q0GGX2 1363 aa30.84■■■□□ 2.53
Cpsf4-205ENSMUST00000160629 Zfp444Q3TDV8 331 aaKnown RBP30.84■■■□□ 2.53
Cpsf4-205ENSMUST00000160629 Ybx3Q9JKB3 361 aaKnown RBP30.83■■■□□ 2.53
Cpsf4-205ENSMUST00000160629 Ciz1Q8VEH2 845 aa30.82■■■□□ 2.52
Cpsf4-205ENSMUST00000160629 CrbnQ8C7D2 445 aa30.81■■■□□ 2.52
Cpsf4-205ENSMUST00000160629 Mapk8ip3Q9ESN9 1337 aa30.8■■■□□ 2.52
Cpsf4-205ENSMUST00000160629 GapdhsQ64467 440 aa30.8■■■□□ 2.52
Cpsf4-205ENSMUST00000160629 PalmQ9Z0P4 383 aa30.79■■■□□ 2.52
Cpsf4-205ENSMUST00000160629 Rad21Q61550 635 aaKnown RBP30.78■■■□□ 2.52
Cpsf4-205ENSMUST00000160629 Znf526Q8BI66 675 aa30.78■■■□□ 2.52
Cpsf4-205ENSMUST00000160629 Marf1Q8BJ34 1730 aaKnown RBP30.78■■■□□ 2.52
Cpsf4-205ENSMUST00000160629 Nckap5lQ6GQX2 1323 aa30.78■■■□□ 2.52
Cpsf4-205ENSMUST00000160629 Ralbp1Q62172 648 aa30.78■■■□□ 2.52
Cpsf4-205ENSMUST00000160629 Eif4a2P10630 407 aa30.76■■■□□ 2.52
Cpsf4-205ENSMUST00000160629 Dixdc1Q80Y83 711 aa30.76■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Speer4f1Q9D5Q6 258 aa30.76■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Zmym3Q9JLM4 1370 aa30.75■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Nfat5Q9WV30 1534 aa30.75■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Nhsl1Q8CAF4 1587 aa30.74■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Spef2Q8C9J3 1734 aa30.74■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 TatQ8QZR1 454 aa30.73■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Bcl2l12Q9D3J3 255 aa30.73■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Siglec1Q62230 1695 aa30.73■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Fmnl2A2APV2 1086 aa30.73■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Fbln2P37889 1221 aa30.73■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 PtprvP70289 1705 aa30.72■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Sema6bO54951 886 aa30.72■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Apaf1O88879 1249 aa30.72■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Dzip1Q8BMD2 852 aa30.72■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Atp7bQ64446 1462 aa30.71■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Hoxc9P09633 260 aa30.71■■■□□ 2.51
Cpsf4-205ENSMUST00000160629 Cntnap1O54991 1385 aa30.7■■■□□ 2.51
Retrieved 100 of 22,080 RNA–protein pairs in 79.7 ms