RNA–Protein interactions for RNA: ENSMUST00000160629.7

Cpsf4-205, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Cpsf4, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-205ENSMUST00000160629 Gm35339A0A140LHH9 1649 aa49.56■■■■■ 5.52
Cpsf4-205ENSMUST00000160629 NischQ80TM9 1593 aa49.47■■■■■ 5.51
Cpsf4-205ENSMUST00000160629 Abcc9P70170 1546 aa48■■■■■ 5.28
Cpsf4-205ENSMUST00000160629 Abcc8B2RUS7 1588 aa47.44■■■■■ 5.18
Cpsf4-205ENSMUST00000160629 ScribQ80U72 1612 aa45.55■■■■■ 4.88
Cpsf4-205ENSMUST00000160629 Dcaf1Q80TR8 1506 aa44.17■■■■■ 4.66
Cpsf4-205ENSMUST00000160629 NacadQ5SWP3 1504 aa44.09■■■■■ 4.65
Cpsf4-205ENSMUST00000160629 Kdm5dQ62240 1548 aa44.05■■■■■ 4.64
Cpsf4-205ENSMUST00000160629 Rhox8Q6VSS7 320 aa44■■■■■ 4.63
Cpsf4-205ENSMUST00000160629 Sycp2Q9CUU3 1500 aa43.22■■■■■ 4.51
Cpsf4-205ENSMUST00000160629 Rb1cc1Q9ESK9 1588 aa43.21■■■■■ 4.51
Cpsf4-205ENSMUST00000160629 Ccdc180J3QNE4 1664 aa42.96■■■■■ 4.47
Cpsf4-205ENSMUST00000160629 Baz1aO88379 1555 aa42.73■■■■■ 4.43
Cpsf4-205ENSMUST00000160629 BicraF8VPZ9 1578 aa42.63■■■■■ 4.42
Cpsf4-205ENSMUST00000160629 Crybg2B7ZCC2 1516 aa42.46■■■■■ 4.39
Cpsf4-205ENSMUST00000160629 Rtl1Q7M732 1744 aa42.32■■■■■ 4.37
Cpsf4-205ENSMUST00000160629 Zcchc6Q5BLK4 1491 aaKnown RBP41.85■■■■■ 4.29
Cpsf4-205ENSMUST00000160629 Smarca2Q6DIC0 1577 aa41.6■■■■■ 4.25
Cpsf4-205ENSMUST00000160629 Pds5bQ4VA53 1446 aaKnown RBP41.39■■■■■ 4.22
Cpsf4-205ENSMUST00000160629 Dnajc5bQ9CQ94 199 aa41.3■■■■■ 4.2
Cpsf4-205ENSMUST00000160629 Thoc2B1AZI6 1594 aaKnown RBP41.06■■■■■ 4.16
Cpsf4-205ENSMUST00000160629 Atad2bE9Q166 1460 aaKnown RBP41.02■■■■■ 4.16
Cpsf4-205ENSMUST00000160629 Ccdc136Q3TVA9 1136 aa40.92■■■■■ 4.14
Cpsf4-205ENSMUST00000160629 Cecr2E9Q2Z1 1453 aa40.85■■■■■ 4.13
Cpsf4-205ENSMUST00000160629 Smarca4Q3TKT4 1613 aaKnown RBP40.75■■■■■ 4.11
Cpsf4-205ENSMUST00000160629 Brd4Q9ESU6 1400 aaKnown RBP40.59■■■■■ 4.09
Cpsf4-205ENSMUST00000160629 Ercc6F8VPZ5 1481 aa40.55■■■■■ 4.08
Cpsf4-205ENSMUST00000160629 Iqgap2Q3UQ44 1575 aa40.52■■■■■ 4.08
Cpsf4-205ENSMUST00000160629 Trim41Q5NCC3 630 aa40.52■■■■■ 4.08
Cpsf4-205ENSMUST00000160629 Cc2d2aQ8CFW7 1633 aa40.41■■■■■ 4.06
Cpsf4-205ENSMUST00000160629 CftrP26361 1476 aa40.24■■■■■ 4.03
Cpsf4-205ENSMUST00000160629 Synj1Q8CHC4 1574 aa40.24■■■■■ 4.03
Cpsf4-205ENSMUST00000160629 Cttnbp2B9EJA2 1648 aa40.19■■■■■ 4.02
Cpsf4-205ENSMUST00000160629 Wdr62Q3U3T8 1523 aa40.16■■■■■ 4.02
Cpsf4-205ENSMUST00000160629 Fam135aQ6NS59 1506 aa40.13■■■■■ 4.01
Cpsf4-205ENSMUST00000160629 Frmpd1A2AKB4 1549 aa40.08■■■■■ 4.01
Cpsf4-205ENSMUST00000160629 Phldb1Q6PDH0 1371 aaKnown RBP39.83■■■■□ 3.97
Cpsf4-205ENSMUST00000160629 Esf1Q3V1V3 845 aaKnown RBP39.66■■■■□ 3.94
Cpsf4-205ENSMUST00000160629 Baz1bQ9Z277 1479 aa39.65■■■■□ 3.94
Cpsf4-205ENSMUST00000160629 Unc13aQ4KUS2 1712 aa39.64■■■■□ 3.94
Cpsf4-205ENSMUST00000160629 Golga3P55937 1487 aa39.57■■■■□ 3.92
Cpsf4-205ENSMUST00000160629 Ubl4bQ9CQ84 188 aa39.45■■■■□ 3.91
Cpsf4-205ENSMUST00000160629 HrcG5E8J6 738 aa39.41■■■■□ 3.9
Cpsf4-205ENSMUST00000160629 Cngb1E1AZ71 1325 aa39.35■■■■□ 3.89
Cpsf4-205ENSMUST00000160629 Top2bQ64511 1612 aa39.33■■■■□ 3.89
Cpsf4-205ENSMUST00000160629 Mrc2Q64449 1479 aa39.18■■■■□ 3.86
Cpsf4-205ENSMUST00000160629 Rsf1E9PWW9 1441 aaKnown RBP38.9■■■■□ 3.82
Cpsf4-205ENSMUST00000160629 Fmn1Q05860 1466 aa38.88■■■■□ 3.82
Cpsf4-205ENSMUST00000160629 Lamc3Q9R0B6 1581 aa38.79■■■■□ 3.8
Cpsf4-205ENSMUST00000160629 Ccdc88bQ4QRL3 1481 aa38.74■■■■□ 3.79
Cpsf4-205ENSMUST00000160629 Cep164Q5DU05 1446 aa38.74■■■■□ 3.79
Cpsf4-205ENSMUST00000160629 TnnQ80Z71 1560 aa38.72■■■■□ 3.79
Cpsf4-205ENSMUST00000160629 Kif15Q6P9L6 1387 aa38.68■■■■□ 3.78
Cpsf4-205ENSMUST00000160629 Cux2P70298 1426 aa38.63■■■■□ 3.78
Cpsf4-205ENSMUST00000160629 Chic1Q8CBW7 227 aa38.61■■■■□ 3.77
Cpsf4-205ENSMUST00000160629 Lrriq1Q0P5X1 1673 aa38.38■■■■□ 3.73
Cpsf4-205ENSMUST00000160629 Kif21aQ9QXL2 1672 aa38.38■■■■□ 3.73
Cpsf4-205ENSMUST00000160629 Top2aQ01320 1528 aaKnown RBP38.36■■■■□ 3.73
Cpsf4-205ENSMUST00000160629 Ccdc18Q640L5 1455 aa38.28■■■■□ 3.72
Cpsf4-205ENSMUST00000160629 Camsap1A2AHC3 1581 aa38.22■■■■□ 3.71
Cpsf4-205ENSMUST00000160629 Npm1Q61937 292 aaKnown RBP38.21■■■■□ 3.71
Cpsf4-205ENSMUST00000160629 Il27Q8K3I6 234 aa38.01■■■■□ 3.67
Cpsf4-205ENSMUST00000160629 Gab3Q8BSM5 595 aa37.9■■■■□ 3.66
Cpsf4-205ENSMUST00000160629 Grin2bQ01097 1482 aa37.84■■■■□ 3.65
Cpsf4-205ENSMUST00000160629 LrpprcQ6PB66 1392 aaKnown RBP37.84■■■■□ 3.65
Cpsf4-205ENSMUST00000160629 Dhx29Q6PGC1 1365 aaKnown RBP37.83■■■■□ 3.65
Cpsf4-205ENSMUST00000160629 Eif4g3Q80XI3 1579 aaKnown RBP37.82■■■■□ 3.64
Cpsf4-205ENSMUST00000160629 NrkQ9R0G8 1455 aa37.8■■■■□ 3.64
Cpsf4-205ENSMUST00000160629 Rapgef2Q8CHG7 1496 aa37.75■■■■□ 3.63
Cpsf4-205ENSMUST00000160629 Urb2E9Q7L1 1524 aaKnown RBP37.74■■■■□ 3.63
Cpsf4-205ENSMUST00000160629 PogzQ8BZH4 1409 aaKnown RBP37.7■■■■□ 3.63
Cpsf4-205ENSMUST00000160629 Crocc2F6XLV1 1638 aa37.69■■■■□ 3.62
Cpsf4-205ENSMUST00000160629 Plb1Q3TTY0 1478 aa37.68■■■■□ 3.62
Cpsf4-205ENSMUST00000160629 Shroom4Q1W617 1475 aa37.65■■■■□ 3.62
Cpsf4-205ENSMUST00000160629 Efcab5A0JP43 1406 aa37.59■■■■□ 3.61
Cpsf4-205ENSMUST00000160629 Npm2Q80W85 207 aa37.55■■■■□ 3.6
Cpsf4-205ENSMUST00000160629 Duox2A2AQ99 1517 aa37.55■■■■□ 3.6
Cpsf4-205ENSMUST00000160629 PtprkP35822 1457 aa37.53■■■■□ 3.6
Cpsf4-205ENSMUST00000160629 Cep162Q6ZQ06 1403 aa37.44■■■■□ 3.58
Cpsf4-205ENSMUST00000160629 Ift140E9PY46 1464 aa37.36■■■■□ 3.57
Cpsf4-205ENSMUST00000160629 Eif4g1Q6NZJ6 1600 aaKnown RBP37.34■■■■□ 3.57
Cpsf4-205ENSMUST00000160629 Dnajc5P60904 198 aa37.28■■■■□ 3.56
Cpsf4-205ENSMUST00000160629 Shroom2A2ALU4 1481 aa37.27■■■■□ 3.56
Cpsf4-205ENSMUST00000160629 Map3k1P53349 1493 aa37.25■■■■□ 3.55
Cpsf4-205ENSMUST00000160629 Arhgap35Q91YM2 1499 aa37.24■■■■□ 3.55
Cpsf4-205ENSMUST00000160629 Rusc2Q80U22 1514 aa37.23■■■■□ 3.55
Cpsf4-205ENSMUST00000160629 Samd9lQ69Z37 1561 aa37.22■■■■□ 3.55
Cpsf4-205ENSMUST00000160629 Mroh2bQ7M6Y6 1581 aa37.21■■■■□ 3.55
Cpsf4-205ENSMUST00000160629 Zeb1Q64318 1117 aa37.14■■■■□ 3.54
Cpsf4-205ENSMUST00000160629 Disp1Q3TDN0 1521 aa37.1■■■■□ 3.53
Cpsf4-205ENSMUST00000160629 Setd1bQ8CFT2 1985 aa37.07■■■■□ 3.52
Cpsf4-205ENSMUST00000160629 SynmQ70IV5 1561 aa37.06■■■■□ 3.52
Cpsf4-205ENSMUST00000160629 Myt1lP97500 1187 aa37.05■■■■□ 3.52
Cpsf4-205ENSMUST00000160629 AqrQ8CFQ3 1481 aaKnown RBP37.02■■■■□ 3.52
Cpsf4-205ENSMUST00000160629 Pbrm1Q8BSQ9 1634 aaKnown RBP37.02■■■■□ 3.52
Cpsf4-205ENSMUST00000160629 Clip1Q922J3 1391 aa36.95■■■■□ 3.51
Cpsf4-205ENSMUST00000160629 Nup160Q9Z0W3 1402 aaKnown RBP36.95■■■■□ 3.51
Cpsf4-205ENSMUST00000160629 Rad54l2Q99NG0 1466 aa36.94■■■■□ 3.5
Cpsf4-205ENSMUST00000160629 Carmil1Q6EDY6 1374 aa36.91■■■■□ 3.5
Cpsf4-205ENSMUST00000160629 Pabpn1Q8CCS6 302 aaKnown RBP36.88■■■■□ 3.49
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms