RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Atf7ipQ7TT18 1306 aa13.81□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Puf60Q3UEB3 564 aaKnown RBP13.81□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 IbspQ61711 324 aa13.81□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Usp40Q8BWR4 1235 aa13.81□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 MyclP10166 368 aa13.8□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Gtf2e1Q9D0D5 440 aa13.8□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Cep152A2AUM9 1736 aaKnown RBP13.8□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Ccdc30Q8BVF4 654 aa13.8□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Plekhh1Q80TI1 1356 aa13.8□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Kif7B7ZNG0 1348 aa13.8□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 MlecQ6ZQI3 291 aaKnown RBP13.79□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Cdk5rap2Q8K389 1822 aa13.79□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Pank1Q8K4K6 548 aa13.79□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Shq1Q7TMX5 569 aa13.78□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Stk26Q99JT2 416 aa13.78□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Naip7Q9JIB3 1402 aa13.78□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Uggt1Q6P5E4 1551 aa13.78□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Trim26Q99PN3 545 aa13.78□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Tmed8Q3UHI4 326 aa13.77□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Itsn1Q9Z0R4 1714 aa13.77□□□□□ -0.2
Prpf40b-202ENSMUST00000118287 Q9D9H8 365 aa13.77□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Pola1P33609 1465 aa13.77□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Asxl2Q8BZ32 1370 aa13.76□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Rangap1P46061 589 aaKnown RBP13.76□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Gas2l2Q5SSG4 860 aa13.76□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Myom1Q62234 1667 aaKnown RBP13.76□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Ccdc183A2AJB1 534 aa13.76□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Mapk8ip3Q9ESN9 1337 aa13.76□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Gtf2a1Q99PM3 378 aa13.75□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Plxnc1Q9QZC2 1574 aa13.75□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Txndc2Q6P902 515 aa13.75□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Golga2Q921M4 999 aa13.74□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Itsn2Q9Z0R6 1659 aa13.74□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Med14A2ABV5 1459 aaKnown RBP13.73□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Stag3O70576 1240 aa13.73□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 KarsQ99MN1 595 aaKnown RBP13.73□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Sipa1l1Q8C0T5 1782 aa13.73□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Lrrc7Q80TE7 1490 aa13.73□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Cnga1P29974 684 aa13.73□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Usp19Q3UJD6 1360 aa13.71□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Psme1P97371 249 aa13.71□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Gpatch11Q3UFS4 262 aa13.71□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Ppp1r9bQ6R891 817 aaKnown RBP13.71□□□□□ -0.21
Prpf40b-202ENSMUST00000118287 Nphp4P59240 1425 aa13.7□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Slc52a2Q9D8F3 450 aa13.7□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 IghaA0A0A6YXW6 389 aa13.69□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 4930407I10RikD3Z5T8 1512 aa13.69□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Htatsf1Q8BGC0 757 aa13.69□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Kdm5aQ3UXZ9 1690 aa13.69□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Atxn3Q9CVD2 355 aa13.68□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Rlbp1Q9Z275 317 aa13.68□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Ralbp1Q62172 648 aa13.68□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 IqubQ8CDK3 788 aa13.68□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 AU015836B2RUM3 263 aa13.67□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Uspl1Q3ULM6 1089 aa13.67□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 PalldQ9ET54 1408 aa13.67□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Arhgef28P97433 1693 aa13.67□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Utp14aQ640M1 767 aaKnown RBP13.67□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Tnpo1Q8BFY9 898 aaKnown RBP13.67□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Cluap1Q8R3P7 413 aa13.67□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Dip2bQ3UH60 1574 aa13.67□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Kiaa1107Q80TK0 1369 aa13.66□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Cep170bQ80U49 1574 aa13.66□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Pdlim2Q8R1G6 349 aa13.66□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Rrp9Q91WM3 475 aaKnown RBP13.66□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Chd2E9PZM4 1827 aaKnown RBP13.66□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Alpk3Q924C5 1678 aa13.66□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Sparcl1P70663 650 aa13.65□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Zranb1Q7M760 708 aa13.65□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 DnmbpQ6TXD4 1580 aa13.65□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Zmym3Q9JLM4 1370 aa13.65□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Kcng1A2BDX4 514 aa13.65□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Vsig10D3YX43 558 aa13.65□□□□□ -0.22
Prpf40b-202ENSMUST00000118287 Gprasp1Q5U4C1 1347 aa13.64□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Duxf3A0A0N4SV92 674 aa13.64□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Cers3Q1A3B0 383 aa13.64□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Pnmal2G3X9N3 661 aa13.63□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Zc3h13E9Q784 1729 aaKnown RBP13.63□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Ift172Q6VH22 1749 aa13.63□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Trim58Q5NCC9 485 aa13.62□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 PplQ9R269 1755 aa13.62□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Sptbn5F6UCX4 1208 aa13.62□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Map4k4P97820 1233 aaKnown RBP13.62□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Ecm2Q5FW85 670 aa13.62□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Mfap1aC0HKD8 439 aaKnown RBP13.61□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Mfap1bC0HKD9 439 aaKnown RBP13.61□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Ksr2Q3UVC0 959 aa13.61□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 GsdmaQ9EST1 446 aa13.61□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Sh3bp1P55194 680 aa13.6□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Ppp2r3aB2RXC8 1150 aa13.59□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Apaf1O88879 1249 aa13.59□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Atp2b2Q9R0K7 1198 aa13.59□□□□□ -0.23
Prpf40b-202ENSMUST00000118287 Tmem132aQ922P8 1018 aa13.58□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 CenpjQ569L8 1344 aa13.58□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Ppp1r3fQ9JIG4 799 aa13.57□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Cald1E9QA15 768 aaKnown RBP13.57□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 P2rx7Q9Z1M0 595 aa13.57□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Eif2ak4Q9QZ05 1648 aa13.57□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 IbtkQ6ZPR6 1352 aaKnown RBP13.57□□□□□ -0.24
Prpf40b-202ENSMUST00000118287 Tmc1Q8R4P5 757 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms