RNA–Protein interactions for RNA: ENSMUST00000113695.7

Tpm1-211, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-211ENSMUST00000113695 CemipQ8BI06 1361 aa28.24■■■□□ 2.11
Tpm1-211ENSMUST00000113695 Rab3gap2Q8BMG7 1366 aa28.22■■■□□ 2.11
Tpm1-211ENSMUST00000113695 Tom1O88746 492 aa28.21■■■□□ 2.11
Tpm1-211ENSMUST00000113695 Cdk12Q14AX6 1484 aaKnown RBP28.21■■■□□ 2.11
Tpm1-211ENSMUST00000113695 Hoxb7P09024 217 aa28.2■■■□□ 2.1
Tpm1-211ENSMUST00000113695 Ddx17Q501J6 650 aaKnown RBP28.2■■■□□ 2.1
Tpm1-211ENSMUST00000113695 Ppp2r1aQ76MZ3 589 aa28.2■■■□□ 2.1
Tpm1-211ENSMUST00000113695 Pcgf6Q99NA9 353 aa28.2■■■□□ 2.1
Tpm1-211ENSMUST00000113695 Ncoa4Q5U4H9 625 aa28.19■■■□□ 2.1
Tpm1-211ENSMUST00000113695 Mdc1Q5PSV9 1707 aa28.18■■■□□ 2.1
Tpm1-211ENSMUST00000113695 Cald1E9QA15 768 aaKnown RBP28.18■■■□□ 2.1
Tpm1-211ENSMUST00000113695 Dennd6aQ8BH65 605 aa28.18■■■□□ 2.1
Tpm1-211ENSMUST00000113695 Atp7bQ64446 1462 aa28.17■■■□□ 2.1
Tpm1-211ENSMUST00000113695 Wwc2Q6NXJ0 1187 aa28.17■■■□□ 2.1
Tpm1-211ENSMUST00000113695 Exoc6Q8R313 802 aa28.17■■■□□ 2.1
Tpm1-211ENSMUST00000113695 Nlgn1Q99K10 843 aa28.14■■■□□ 2.09
Tpm1-211ENSMUST00000113695 Ncapd2Q8K2Z4 1392 aa28.13■■■□□ 2.09
Tpm1-211ENSMUST00000113695 Gm21190A0A0G2JGJ6 266 aa28.13■■■□□ 2.09
Tpm1-211ENSMUST00000113695 Dixdc1Q80Y83 711 aa28.13■■■□□ 2.09
Tpm1-211ENSMUST00000113695 Atp10bB1AWN4 1474 aa28.13■■■□□ 2.09
Tpm1-211ENSMUST00000113695 Tex14Q7M6U3 1450 aa28.13■■■□□ 2.09
Tpm1-211ENSMUST00000113695 Ubr1O70481 1757 aa28.12■■■□□ 2.09
Tpm1-211ENSMUST00000113695 Cadps2Q8BYR5 1297 aa28.11■■■□□ 2.09
Tpm1-211ENSMUST00000113695 Zmym3Q9JLM4 1370 aa28.11■■■□□ 2.09
Tpm1-211ENSMUST00000113695 Birc3O08863 600 aa28.09■■■□□ 2.09
Tpm1-211ENSMUST00000113695 Scn7aB1AYL1 1681 aa28.08■■■□□ 2.09
Tpm1-211ENSMUST00000113695 Marf1Q8BJ34 1730 aaKnown RBP28.07■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Ano8Q6PB70 1060 aa28.07■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Rpgrip1lQ8CG73 1264 aa28.07■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Cabp4Q8VHC5 271 aa28.07■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Zfp142G5E869 1843 aa28.06■■■□□ 2.08
Tpm1-211ENSMUST00000113695 PnisrA2AJT4 805 aaKnown RBP28.06■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Kcnh5Q920E3 988 aa28.06■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Abca15E9PWH4 1668 aa28.05■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Nlrp6Q91WS2 869 aa28.05■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Mrs2Q5NCE8 434 aa28.04■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Dzip1Q8BMD2 852 aa28.04■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Ybx3Q9JKB3 361 aaKnown RBP28.04■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Map2P20357 1828 aa28.03■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Qtrt2B8ZXI1 415 aa28.03■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Tet3Q8BG87 1668 aa28.02■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Rad17Q6NXW6 688 aa28.02■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Bcl9lQ67FY2 1494 aa28.02■■■□□ 2.08
Tpm1-211ENSMUST00000113695 Siglec1Q62230 1695 aa28.01■■■□□ 2.07
Tpm1-211ENSMUST00000113695 PaskQ8CEE6 1383 aa28.01■■■□□ 2.07
Tpm1-211ENSMUST00000113695 Fam135bQ9DAI6 1403 aa28.01■■■□□ 2.07
Tpm1-211ENSMUST00000113695 Trim28Q62318 834 aa28■■■□□ 2.07
Tpm1-211ENSMUST00000113695 Nckap5lQ6GQX2 1323 aa28■■■□□ 2.07
Tpm1-211ENSMUST00000113695 Q7TT23 1179 aa28■■■□□ 2.07
Tpm1-211ENSMUST00000113695 FancaQ9JL70 1439 aa27.98■■■□□ 2.07
Tpm1-211ENSMUST00000113695 Atf7ipQ7TT18 1306 aa27.98■■■□□ 2.07
Tpm1-211ENSMUST00000113695 ZgpatQ8VDM1 511 aa27.98■■■□□ 2.07
Tpm1-211ENSMUST00000113695 Nfat5Q9WV30 1534 aa27.98■■■□□ 2.07
Tpm1-211ENSMUST00000113695 Slc5a4bQ91ZP4 660 aa27.96■■■□□ 2.07
Tpm1-211ENSMUST00000113695 Ppp1r15aP17564 657 aa27.96■■■□□ 2.07
Tpm1-211ENSMUST00000113695 HdgfP51859 237 aaKnown RBP27.95■■■□□ 2.06
Tpm1-211ENSMUST00000113695 Nid2O88322 1403 aa27.94■■■□□ 2.06
Tpm1-211ENSMUST00000113695 Fmnl2A2APV2 1086 aa27.94■■■□□ 2.06
Tpm1-211ENSMUST00000113695 Zscan21Q07231 555 aa27.94■■■□□ 2.06
Tpm1-211ENSMUST00000113695 TatQ8QZR1 454 aa27.94■■■□□ 2.06
Tpm1-211ENSMUST00000113695 NrdcQ8BHG1 1161 aa27.93■■■□□ 2.06
Tpm1-211ENSMUST00000113695 Znf526Q8BI66 675 aa27.93■■■□□ 2.06
Tpm1-211ENSMUST00000113695 P2rx7Q9Z1M0 595 aa27.93■■■□□ 2.06
Tpm1-211ENSMUST00000113695 Robo1O89026 1612 aa27.92■■■□□ 2.06
Tpm1-211ENSMUST00000113695 TnrQ8BYI9 1358 aa27.9■■■□□ 2.06
Tpm1-211ENSMUST00000113695 Fbxo41Q6NS60 873 aa27.89■■■□□ 2.06
Tpm1-211ENSMUST00000113695 GsdmaQ9EST1 446 aa27.89■■■□□ 2.06
Tpm1-211ENSMUST00000113695 Slc4a2P13808 1237 aaKnown RBP27.89■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Gm21698A0A087WQP8 267 aa27.88■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Gm21671G3UY31 267 aa27.88■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Bcl2l12Q9D3J3 255 aa27.88■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Dnajc10Q9DC23 793 aa27.88■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Cdhr2E9Q7P9 1308 aa27.86■■■□□ 2.05
Tpm1-211ENSMUST00000113695 PtprvP70289 1705 aa27.85■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Hoxc9P09633 260 aa27.85■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Card10P58660 1021 aa27.85■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Acsbg1Q99PU5 721 aa27.85■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Zfp777B9EKF4 885 aa27.84■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Arhgef1Q61210 920 aaKnown RBP27.84■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Lrrc59Q922Q8 307 aaKnown RBP27.84■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Kiaa1107Q80TK0 1369 aa27.84■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Uhrf1bp1lA2RSJ4 1457 aa27.83■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Slc12a5Q91V14 1138 aa27.83■■■□□ 2.05
Tpm1-211ENSMUST00000113695 Tsen2Q6P7W5 460 aa27.82■■■□□ 2.04
Tpm1-211ENSMUST00000113695 Smim5Q8BT42 78 aa27.81■■■□□ 2.04
Tpm1-211ENSMUST00000113695 Rsph6aQ8CDR2 708 aa27.81■■■□□ 2.04
Tpm1-211ENSMUST00000113695 Nol11Q8BJW5 723 aaKnown RBP27.81■■■□□ 2.04
Tpm1-211ENSMUST00000113695 Amotl2Q8K371 772 aa27.8■■■□□ 2.04
Tpm1-211ENSMUST00000113695 Eif4a2P10630 407 aa27.78■■■□□ 2.04
Tpm1-211ENSMUST00000113695 Tmem132eQ6IEE6 982 aa27.78■■■□□ 2.04
Tpm1-211ENSMUST00000113695 Ptpn23Q6PB44 1692 aa27.78■■■□□ 2.04
Tpm1-211ENSMUST00000113695 Nop58Q6DFW4 536 aaKnown RBP27.78■■■□□ 2.04
Tpm1-211ENSMUST00000113695 Txnrd1Q9JMH6 613 aa27.78■■■□□ 2.04
Tpm1-211ENSMUST00000113695 U2af1Q9D883 239 aaKnown RBP27.76■■■□□ 2.03
Tpm1-211ENSMUST00000113695 Ddx54Q8K4L0 874 aaKnown RBP27.75■■■□□ 2.03
Tpm1-211ENSMUST00000113695 Slit2Q9R1B9 1521 aa27.75■■■□□ 2.03
Tpm1-211ENSMUST00000113695 Ccne1Q61457 408 aa27.74■■■□□ 2.03
Tpm1-211ENSMUST00000113695 Parp14Q2EMV9 1817 aa27.74■■■□□ 2.03
Tpm1-211ENSMUST00000113695 Slx1bQ8BX32 270 aa27.74■■■□□ 2.03
Tpm1-211ENSMUST00000113695 Ggt6Q6PDE7 497 aa27.73■■■□□ 2.03
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms