RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Q9D9H8 365 aa10.28□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Znf316Q6PGE4 1016 aa10.28□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Cetn4Q8K4K1 168 aa10.28□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Zranb1Q7M760 708 aa10.28□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Nos1Q9Z0J4 1429 aa10.27□□□□□ -0.76
Bdnf-208ENSMUST00000111049 FanciQ8K368 1330 aa10.27□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Gnai1B2RSH2 354 aa10.27□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Gnai3Q9DC51 354 aa10.27□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Cdk19Q8BWD8 501 aa10.27□□□□□ -0.77
Bdnf-208ENSMUST00000111049 P2rx7Q9Z1M0 595 aa10.27□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Lrrc7Q80TE7 1490 aa10.26□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Cgnl1Q6AW69 1298 aa10.26□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Ccdc146E9Q9F7 977 aa10.26□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Fchsd2Q3USJ8 740 aa10.26□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Ssh1Q76I79 1042 aa10.26□□□□□ -0.77
Bdnf-208ENSMUST00000111049 PalmQ9Z0P4 383 aa10.26□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Rims1Q99NE5 1463 aa10.26□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Eif4g2Q62448 906 aaKnown RBP10.25□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Pdcl3Q8BVF2 240 aa10.25□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Rsph4aQ8BYM7 716 aa10.25□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Ncbp3Q8BZR9 615 aaKnown RBP10.25□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Ppp1r3fQ9JIG4 799 aa10.25□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Uggt1Q6P5E4 1551 aa10.25□□□□□ -0.77
Bdnf-208ENSMUST00000111049 AU019823E9PUQ3 292 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Slc12a5Q91V14 1138 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Usp16Q99LG0 825 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Nek4Q9Z1J2 792 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 AU022751B1B0V2 589 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Pnmal2G3X9N3 661 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Plekhm2Q80TQ5 1018 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Cdc37l1Q9CZP7 335 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Catsper2A2ARP9 588 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Terf2O35144 541 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 SlkO54988 1233 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Mcm4P49717 862 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Kcna4Q61423 654 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Aldh1l1Q8R0Y6 902 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Phf14Q9D4H9 881 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Gli2Q0VGT2 1544 aa10.24□□□□□ -0.77
Bdnf-208ENSMUST00000111049 PaskQ8CEE6 1383 aa10.23□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Kidins220E9Q9B7 1793 aa10.23□□□□□ -0.77
Bdnf-208ENSMUST00000111049 PtmaP26350 111 aa10.23□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Wwc1Q5SXA9 1104 aa10.23□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Talpid3E9PV87 1520 aa10.23□□□□□ -0.77
Bdnf-208ENSMUST00000111049 MvpQ9EQK5 861 aa10.23□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Ankrd50F7BE84 1390 aa10.23□□□□□ -0.77
Bdnf-208ENSMUST00000111049 KdrP35918 1367 aa10.23□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Abca6Q8K441 1624 aa10.22□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Q3UPC7 1272 aa10.22□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Ric3Q8BPM6 367 aa10.22□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Stk31Q99MW1 1018 aa10.22□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Efcab6Q6P1E8 1516 aa10.22□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Zfyve16Q80U44 1528 aa10.22□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Casq1O09165 405 aa10.22□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Plxnc1Q9QZC2 1574 aa10.21□□□□□ -0.77
Bdnf-208ENSMUST00000111049 NinlQ6ZQ12 1394 aa10.21□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Hfm1D3Z4R1 1434 aa10.21□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Iqgap3F8VQ29 1632 aa10.21□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Triml2E9PW10 424 aa10.21□□□□□ -0.77
Bdnf-208ENSMUST00000111049 Ttc21aQ8C0S4 1314 aa10.21□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Eif2ak4Q9QZ05 1648 aa10.21□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Abca17E9PX95 1733 aa10.2□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Myo5cE9Q1F5 1742 aa10.2□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Brd1E9PZ26 1189 aaKnown RBP10.2□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Pibf1E9Q6K3 756 aa10.2□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Psme1P97371 249 aa10.2□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Xrn1P97789 1719 aaKnown RBP10.2□□□□□ -0.78
Bdnf-208ENSMUST00000111049 CarsQ9ER72 831 aaKnown RBP10.2□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Tfip11Q9ERA6 838 aaKnown RBP10.2□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Pabpn1Q8CCS6 302 aaKnown RBP10.2□□□□□ -0.78
Bdnf-208ENSMUST00000111049 NgefQ8CHT1 710 aa10.2□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Pdlim2Q8R1G6 349 aa10.2□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Zfp777B9EKF4 885 aa10.19□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Txndc2Q6P902 515 aa10.19□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Isy1Q69ZQ2 285 aaKnown RBP10.19□□□□□ -0.78
Bdnf-208ENSMUST00000111049 PtmsQ9D0J8 101 aaKnown RBP10.19□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Chd1P40201 1711 aa10.19□□□□□ -0.78
Bdnf-208ENSMUST00000111049 1700010I14RikQ7TPG0 532 aa10.19□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Cabp2Q9JLK4 216 aa10.19□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Rtf1A2AQ19 715 aaKnown RBP10.18□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Ankrd44B2RXR6 993 aa10.18□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Wdr63B2RY71 923 aa10.18□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Ppp1r15aP17564 657 aa10.18□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Adgrb3Q80ZF8 1522 aa10.18□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Ptch1Q61115 1434 aa10.18□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Gm10093D3YYI8 482 aa10.18□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Hdac1O09106 482 aaKnown RBP10.18□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Kif20aP97329 887 aa10.18□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Rrp12Q6P5B0 1295 aaKnown RBP10.18□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Gtf2a1Q99PM3 378 aa10.18□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Aplp1Q03157 653 aa10.18□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Tbc1d9Q3UYK3 1264 aa10.17□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Ppp1r18Q8BQ30 594 aa10.17□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Mcm2P97310 904 aa10.17□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Gcc1Q9D4H2 778 aa10.17□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Hsp90b1P08113 802 aaKnown RBP10.17□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Rab11fip3Q8CHD8 1047 aa10.17□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Iqsec2Q5DU25 1478 aa10.17□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Vamp4O70480 141 aa10.16□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Afap1Q80YS6 731 aa10.16□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms