RNA–Protein interactions for RNA: ENSMUST00000103611.1

Trav6n-5-201, Transcript of T cell receptor alpha variable 6N-5 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav6n-5, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5-201ENSMUST00000103611 Ppargc1bQ8VHJ7 1014 aa8.66□□□□□ -1.02
Trav6n-5-201ENSMUST00000103611 Lrrc59Q922Q8 307 aaKnown RBP8.66□□□□□ -1.02
Trav6n-5-201ENSMUST00000103611 Frmpd2A0A140LI67 1392 aa8.65□□□□□ -1.02
Trav6n-5-201ENSMUST00000103611 Las1lA2BE28 776 aaKnown RBP8.65□□□□□ -1.02
Trav6n-5-201ENSMUST00000103611 Arhgef1Q61210 920 aaKnown RBP8.65□□□□□ -1.02
Trav6n-5-201ENSMUST00000103611 Cypt2Q6P924 180 aa8.65□□□□□ -1.02
Trav6n-5-201ENSMUST00000103611 Dmrt2Q8BG36 561 aa8.65□□□□□ -1.02
Trav6n-5-201ENSMUST00000103611 MypopQ8R4U1 393 aa8.65□□□□□ -1.02
Trav6n-5-201ENSMUST00000103611 ZgpatQ8VDM1 511 aa8.65□□□□□ -1.02
Trav6n-5-201ENSMUST00000103611 TimelessQ9R1X4 1197 aa8.65□□□□□ -1.02
Trav6n-5-201ENSMUST00000103611 Col16a1Q8BLX7 1580 aa8.65□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Kif7B7ZNG0 1348 aa8.64□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 HdgfP51859 237 aaKnown RBP8.64□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Slc35g1Q8BY79 368 aa8.64□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Gimap6Q8K349 305 aa8.64□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Acsbg1Q99PU5 721 aa8.64□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Senp3Q9EP97 568 aaKnown RBP8.64□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Nfat5Q9WV30 1534 aa8.64□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 NinlQ6ZQ12 1394 aa8.63□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 PaskQ8CEE6 1383 aa8.63□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Cnga1P29974 684 aa8.63□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Smim5Q8BT42 78 aa8.63□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Ddx54Q8K4L0 874 aaKnown RBP8.63□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Mdc1Q5PSV9 1707 aa8.63□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Nid2O88322 1403 aa8.63□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Astn2Q80Z10 1352 aa8.62□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Kif16bB1AVY7 1312 aa8.62□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Cdhr2E9Q7P9 1308 aa8.62□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Dzip1Q8BMD2 852 aa8.62□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Ncapd2Q8K2Z4 1392 aa8.6□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Scn7aB1AYL1 1681 aa8.59□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Shank2Q80Z38 1476 aa8.59□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 InhbeO08717 350 aa8.59□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 ArsiQ32KI9 573 aa8.59□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Ncoa4Q5U4H9 625 aa8.59□□□□□ -1.03
Trav6n-5-201ENSMUST00000103611 Cdk12Q14AX6 1484 aaKnown RBP8.58□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Gm21190A0A0G2JGJ6 266 aa8.58□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Slc4a1apE9PX68 744 aa8.58□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Rtl5Q5DTT4 599 aa8.58□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Scaf1Q5U4C3 1256 aaKnown RBP8.58□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Dennd6aQ8BH65 605 aa8.58□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Slc24a1Q91WD8 1130 aa8.58□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Kcnh5Q920E3 988 aa8.58□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 ClspnQ80YR7 1315 aa8.57□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Tnrc6cQ3UHC0 1690 aaKnown RBP8.57□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Gm21698A0A087WQP8 267 aa8.57□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Tmf1B9EKI3 1091 aa8.57□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Gm21671G3UY31 267 aa8.57□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Txnrd1Q9JMH6 613 aa8.57□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Ubr1O70481 1757 aa8.57□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 CemipQ8BI06 1361 aa8.57□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Fam184bQ0KK56 942 aa8.56□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Sin3aQ60520 1274 aaKnown RBP8.56□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 TnrQ8BYI9 1358 aa8.56□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Chd4Q6PDQ2 1915 aaKnown RBP8.56□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Cacna1sQ02789 1880 aa8.55□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Robo1O89026 1612 aa8.55□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Nlgn1Q99K10 843 aa8.55□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Zeb2Q9R0G7 1215 aa8.55□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Pard3Q99NH2 1333 aa8.54□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Col22a1E9Q7P1 1613 aa8.54□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 PrxO55103 1391 aa8.54□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Fmnl2A2APV2 1086 aa8.54□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Card10P58660 1021 aa8.54□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Sf3b2Q3UJB0 878 aaKnown RBP8.54□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Eno4Q8C042 619 aa8.54□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Psrc1Q9D0P7 329 aa8.54□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Map2P20357 1828 aa8.54□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 FancaQ9JL70 1439 aa8.54□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 IbtkQ6ZPR6 1352 aaKnown RBP8.53□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Ano8Q6PB70 1060 aa8.53□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Slx1bQ8BX32 270 aa8.53□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 TatQ8QZR1 454 aa8.53□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Cabp4Q8VHC5 271 aa8.53□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Smg6P61406 1418 aaKnown RBP8.53□□□□□ -1.04
Trav6n-5-201ENSMUST00000103611 Ltbp1Q8CG19 1712 aa8.52□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Kat6bQ8BRB7 1872 aa8.52□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Hoxb7P09024 217 aa8.52□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Prdm10Q3UTQ7 1184 aa8.52□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Plekhg5Q66T02 1073 aa8.52□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Amotl2Q8K371 772 aa8.52□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Pank3Q8R2W9 370 aa8.52□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Slc34a2Q9DBP0 697 aa8.52□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Tnks1bp1P58871 1720 aa8.51□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Nol11Q8BJW5 723 aaKnown RBP8.51□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Dnajc10Q9DC23 793 aa8.51□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Nckap5lQ6GQX2 1323 aa8.51□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Fer1l6E0CZ42 1862 aa8.5□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Sgsm1Q8BPQ7 1093 aa8.5□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Pm20d1Q8C165 503 aa8.5□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Gprasp1Q5U4C1 1347 aa8.5□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Birc3O08863 600 aa8.49□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Ccdc129Q14B48 1034 aa8.49□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Zscan10Q3URR7 782 aa8.49□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Rad17Q6NXW6 688 aa8.49□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Inpp5dQ9ES52 1191 aa8.49□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Nup153E9Q3G8 1462 aaKnown RBP8.49□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 FocadA2AKG8 1798 aa8.48□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Dcaf11Q91VU6 549 aa8.48□□□□□ -1.05
Trav6n-5-201ENSMUST00000103611 Slit1Q80TR4 1531 aa8.48□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms