RNA–Protein interactions for RNA: ENSMUST00000103611.1

Trav6n-5-201, Transcript of T cell receptor alpha variable 6N-5 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav6n-5, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5-201ENSMUST00000103611 Gm35339A0A140LHH9 1649 aa14.15□□□□□ -0.14
Trav6n-5-201ENSMUST00000103611 NischQ80TM9 1593 aa13.93□□□□□ -0.18
Trav6n-5-201ENSMUST00000103611 Abcc9P70170 1546 aa13.51□□□□□ -0.25
Trav6n-5-201ENSMUST00000103611 Abcc8B2RUS7 1588 aa13.45□□□□□ -0.26
Trav6n-5-201ENSMUST00000103611 ScribQ80U72 1612 aa12.96□□□□□ -0.33
Trav6n-5-201ENSMUST00000103611 NacadQ5SWP3 1504 aa12.57□□□□□ -0.4
Trav6n-5-201ENSMUST00000103611 Kdm5dQ62240 1548 aa12.55□□□□□ -0.4
Trav6n-5-201ENSMUST00000103611 Mapk8ip2Q9ERE9 830 aa12.47□□□□□ -0.41
Trav6n-5-201ENSMUST00000103611 Dcaf1Q80TR8 1506 aa12.43□□□□□ -0.42
Trav6n-5-201ENSMUST00000103611 Sycp2Q9CUU3 1500 aa12.31□□□□□ -0.44
Trav6n-5-201ENSMUST00000103611 Rb1cc1Q9ESK9 1588 aa12.17□□□□□ -0.46
Trav6n-5-201ENSMUST00000103611 BicraF8VPZ9 1578 aa12.12□□□□□ -0.47
Trav6n-5-201ENSMUST00000103611 Ccdc180J3QNE4 1664 aa12.06□□□□□ -0.48
Trav6n-5-201ENSMUST00000103611 Rhox8Q6VSS7 320 aa12.01□□□□□ -0.49
Trav6n-5-201ENSMUST00000103611 Baz1aO88379 1555 aa12□□□□□ -0.49
Trav6n-5-201ENSMUST00000103611 Crybg2B7ZCC2 1516 aa11.95□□□□□ -0.5
Trav6n-5-201ENSMUST00000103611 Pds5bQ4VA53 1446 aaKnown RBP11.8□□□□□ -0.52
Trav6n-5-201ENSMUST00000103611 Zcchc6Q5BLK4 1491 aaKnown RBP11.79□□□□□ -0.52
Trav6n-5-201ENSMUST00000103611 Thoc2B1AZI6 1594 aaKnown RBP11.71□□□□□ -0.54
Trav6n-5-201ENSMUST00000103611 Atad2bE9Q166 1460 aaKnown RBP11.69□□□□□ -0.54
Trav6n-5-201ENSMUST00000103611 Smarca2Q6DIC0 1577 aa11.65□□□□□ -0.54
Trav6n-5-201ENSMUST00000103611 Dnajc5bQ9CQ94 199 aa11.63□□□□□ -0.55
Trav6n-5-201ENSMUST00000103611 Smarca4Q3TKT4 1613 aaKnown RBP11.63□□□□□ -0.55
Trav6n-5-201ENSMUST00000103611 Ercc6F8VPZ5 1481 aa11.58□□□□□ -0.56
Trav6n-5-201ENSMUST00000103611 Rtl1Q7M732 1744 aa11.55□□□□□ -0.56
Trav6n-5-201ENSMUST00000103611 Iqgap2Q3UQ44 1575 aa11.55□□□□□ -0.56
Trav6n-5-201ENSMUST00000103611 Cecr2E9Q2Z1 1453 aa11.53□□□□□ -0.56
Trav6n-5-201ENSMUST00000103611 Cc2d2aQ8CFW7 1633 aa11.49□□□□□ -0.57
Trav6n-5-201ENSMUST00000103611 Fam135aQ6NS59 1506 aa11.45□□□□□ -0.58
Trav6n-5-201ENSMUST00000103611 Wdr62Q3U3T8 1523 aa11.45□□□□□ -0.58
Trav6n-5-201ENSMUST00000103611 Frmpd1A2AKB4 1549 aa11.4□□□□□ -0.59
Trav6n-5-201ENSMUST00000103611 Baz1bQ9Z277 1479 aa11.38□□□□□ -0.59
Trav6n-5-201ENSMUST00000103611 Cttnbp2B9EJA2 1648 aa11.35□□□□□ -0.59
Trav6n-5-201ENSMUST00000103611 Phldb1Q6PDH0 1371 aaKnown RBP11.34□□□□□ -0.59
Trav6n-5-201ENSMUST00000103611 Brd4Q9ESU6 1400 aaKnown RBP11.33□□□□□ -0.6
Trav6n-5-201ENSMUST00000103611 CftrP26361 1476 aa11.32□□□□□ -0.6
Trav6n-5-201ENSMUST00000103611 Synj1Q8CHC4 1574 aa11.3□□□□□ -0.6
Trav6n-5-201ENSMUST00000103611 Unc13aQ4KUS2 1712 aa11.27□□□□□ -0.61
Trav6n-5-201ENSMUST00000103611 Ccdc136Q3TVA9 1136 aa11.2□□□□□ -0.62
Trav6n-5-201ENSMUST00000103611 Ubl4bQ9CQ84 188 aa11.17□□□□□ -0.62
Trav6n-5-201ENSMUST00000103611 Mrc2Q64449 1479 aa11.17□□□□□ -0.62
Trav6n-5-201ENSMUST00000103611 Chic1Q8CBW7 227 aa11.16□□□□□ -0.62
Trav6n-5-201ENSMUST00000103611 Esf1Q3V1V3 845 aaKnown RBP11.08□□□□□ -0.64
Trav6n-5-201ENSMUST00000103611 Trim41Q5NCC3 630 aa11.08□□□□□ -0.64
Trav6n-5-201ENSMUST00000103611 Rsf1E9PWW9 1441 aaKnown RBP11.05□□□□□ -0.64
Trav6n-5-201ENSMUST00000103611 Lamc3Q9R0B6 1581 aa11□□□□□ -0.65
Trav6n-5-201ENSMUST00000103611 Kif15Q6P9L6 1387 aa11□□□□□ -0.65
Trav6n-5-201ENSMUST00000103611 Cux2P70298 1426 aa10.99□□□□□ -0.65
Trav6n-5-201ENSMUST00000103611 Lrriq1Q0P5X1 1673 aa10.93□□□□□ -0.66
Trav6n-5-201ENSMUST00000103611 Kif21aQ9QXL2 1672 aa10.92□□□□□ -0.66
Trav6n-5-201ENSMUST00000103611 Top2bQ64511 1612 aa10.92□□□□□ -0.66
Trav6n-5-201ENSMUST00000103611 Golga3P55937 1487 aa10.91□□□□□ -0.66
Trav6n-5-201ENSMUST00000103611 TnnQ80Z71 1560 aa10.9□□□□□ -0.66
Trav6n-5-201ENSMUST00000103611 Cep164Q5DU05 1446 aa10.87□□□□□ -0.67
Trav6n-5-201ENSMUST00000103611 Npm1Q61937 292 aaKnown RBP10.86□□□□□ -0.67
Trav6n-5-201ENSMUST00000103611 Ccdc18Q640L5 1455 aa10.86□□□□□ -0.67
Trav6n-5-201ENSMUST00000103611 Cngb1E1AZ71 1325 aa10.82□□□□□ -0.68
Trav6n-5-201ENSMUST00000103611 Camsap1A2AHC3 1581 aa10.81□□□□□ -0.68
Trav6n-5-201ENSMUST00000103611 Fmn1Q05860 1466 aa10.81□□□□□ -0.68
Trav6n-5-201ENSMUST00000103611 Eif4g3Q80XI3 1579 aaKnown RBP10.8□□□□□ -0.68
Trav6n-5-201ENSMUST00000103611 Dhx29Q6PGC1 1365 aaKnown RBP10.76□□□□□ -0.69
Trav6n-5-201ENSMUST00000103611 Crocc2F6XLV1 1638 aa10.75□□□□□ -0.69
Trav6n-5-201ENSMUST00000103611 LrpprcQ6PB66 1392 aaKnown RBP10.75□□□□□ -0.69
Trav6n-5-201ENSMUST00000103611 Urb2E9Q7L1 1524 aaKnown RBP10.74□□□□□ -0.69
Trav6n-5-201ENSMUST00000103611 Il27Q8K3I6 234 aa10.73□□□□□ -0.69
Trav6n-5-201ENSMUST00000103611 Plb1Q3TTY0 1478 aa10.71□□□□□ -0.69
Trav6n-5-201ENSMUST00000103611 PogzQ8BZH4 1409 aaKnown RBP10.7□□□□□ -0.7
Trav6n-5-201ENSMUST00000103611 Ift140E9PY46 1464 aa10.67□□□□□ -0.7
Trav6n-5-201ENSMUST00000103611 Grin2bQ01097 1482 aa10.65□□□□□ -0.7
Trav6n-5-201ENSMUST00000103611 Duox2A2AQ99 1517 aa10.64□□□□□ -0.71
Trav6n-5-201ENSMUST00000103611 Shroom2A2ALU4 1481 aa10.63□□□□□ -0.71
Trav6n-5-201ENSMUST00000103611 Rusc2Q80U22 1514 aa10.63□□□□□ -0.71
Trav6n-5-201ENSMUST00000103611 Top2aQ01320 1528 aaKnown RBP10.6□□□□□ -0.71
Trav6n-5-201ENSMUST00000103611 Pbrm1Q8BSQ9 1634 aaKnown RBP10.6□□□□□ -0.71
Trav6n-5-201ENSMUST00000103611 Samd9lQ69Z37 1561 aa10.58□□□□□ -0.72
Trav6n-5-201ENSMUST00000103611 Ccdc88bQ4QRL3 1481 aa10.58□□□□□ -0.72
Trav6n-5-201ENSMUST00000103611 Efcab5A0JP43 1406 aa10.58□□□□□ -0.72
Trav6n-5-201ENSMUST00000103611 Disp1Q3TDN0 1521 aa10.55□□□□□ -0.72
Trav6n-5-201ENSMUST00000103611 Dnajc5P60904 198 aa10.55□□□□□ -0.72
Trav6n-5-201ENSMUST00000103611 NrkQ9R0G8 1455 aa10.55□□□□□ -0.72
Trav6n-5-201ENSMUST00000103611 Nup160Q9Z0W3 1402 aaKnown RBP10.53□□□□□ -0.72
Trav6n-5-201ENSMUST00000103611 Cc2d2bA0A286YDU8 1405 aa10.52□□□□□ -0.73
Trav6n-5-201ENSMUST00000103611 Shroom4Q1W617 1475 aa10.5□□□□□ -0.73
Trav6n-5-201ENSMUST00000103611 Setd1bQ8CFT2 1985 aa10.49□□□□□ -0.73
Trav6n-5-201ENSMUST00000103611 Gpatch8A2A6A1 1505 aa10.48□□□□□ -0.73
Trav6n-5-201ENSMUST00000103611 Grin2aP35436 1464 aa10.48□□□□□ -0.73
Trav6n-5-201ENSMUST00000103611 Pabpn1Q8CCS6 302 aaKnown RBP10.47□□□□□ -0.73
Trav6n-5-201ENSMUST00000103611 Magi3Q9EQJ9 1476 aa10.47□□□□□ -0.73
Trav6n-5-201ENSMUST00000103611 AqrQ8CFQ3 1481 aaKnown RBP10.46□□□□□ -0.74
Trav6n-5-201ENSMUST00000103611 Rad54l2Q99NG0 1466 aa10.46□□□□□ -0.74
Trav6n-5-201ENSMUST00000103611 SynmQ70IV5 1561 aa10.45□□□□□ -0.74
Trav6n-5-201ENSMUST00000103611 PtprkP35822 1457 aa10.43□□□□□ -0.74
Trav6n-5-201ENSMUST00000103611 Col17a1Q07563 1470 aa10.43□□□□□ -0.74
Trav6n-5-201ENSMUST00000103611 Zcchc11B2RX14 1644 aaKnown RBP10.41□□□□□ -0.74
Trav6n-5-201ENSMUST00000103611 Pla2r1Q62028 1487 aa10.41□□□□□ -0.74
Trav6n-5-201ENSMUST00000103611 Pelp1Q9DBD5 1123 aaKnown RBP10.4□□□□□ -0.74
Trav6n-5-201ENSMUST00000103611 Fgd6Q69ZL1 1399 aa10.39□□□□□ -0.75
Trav6n-5-201ENSMUST00000103611 Zeb1Q64318 1117 aa10.37□□□□□ -0.75
Trav6n-5-201ENSMUST00000103611 Mroh2bQ7M6Y6 1581 aa10.35□□□□□ -0.75
Trav6n-5-201ENSMUST00000103611 TchhA0A0B4J1F9 1599 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 152.5 ms