RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Jakmip2D3YXK0 820 aa7.14□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Tbc1d32Q3URV1 1296 aa7.14□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Mcm2P97310 904 aa7.14□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Dhx8A2A4P0 1244 aaKnown RBP7.14□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Cep135Q6P5D4 1140 aa7.14□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Chmp3Q9CQ10 224 aa7.14□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Ppip5k2Q6ZQB6 1129 aa7.14□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Cfap58B2RW38 873 aa7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 SrrtQ99MR6 875 aaKnown RBP7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 DonsonQ9QXP4 560 aa7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Pank2Q3U4S0 443 aa7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Mindy4Q3UQI9 744 aa7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Chd1lQ9CXF7 900 aa7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Ranbp1P34022 203 aaKnown RBP7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Ddx11Q6AXC6 880 aa7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Ppp2r1aQ76MZ3 589 aa7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Nat10Q8K224 1024 aaKnown RBP7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Ric3Q8BPM6 367 aa7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Maats1Q8BRC6 783 aa7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Erc2Q6PH08 957 aa7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Ccnb3Q810T2 1396 aa7.13□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Ercc6lQ8BHK9 1240 aa7.12□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Tmx4Q8C0L0 335 aa7.12□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Odf2A3KGV1 830 aaKnown RBP7.12□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Stk26Q99JT2 416 aa7.12□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Rbm25B2RY56 838 aaKnown RBP7.12□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Irf5P56477 497 aa7.12□□□□□ -1.27
Ubr4-201ENSMUST00000097822 CenpjQ569L8 1344 aa7.12□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Tceal9Q9DD24 104 aa7.12□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Zkscan7E9PVW1 718 aa7.12□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Lamb3Q61087 1168 aa7.12□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Spag9Q58A65 1321 aaKnown RBP7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Cplx1P63040 134 aa7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Irx4Q9QY61 515 aa7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Trerf1Q8BXJ2 1205 aa7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Zkscan2G3X952 960 aa7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 MvpQ9EQK5 861 aa7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Sytl4Q9R0Q1 673 aa7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Nf2P46662 596 aa7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Psma5Q9Z2U1 241 aaKnown RBP7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Zeb2Q9R0G7 1215 aa7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Vps8Q0P5W1 1427 aa7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Sycp1Q62209 993 aa7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Nbr1P97432 988 aa7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 SelenooQ9DBC0 667 aa7.11□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Jakmip3Q5DTN8 844 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Vps18Q8R307 973 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Plekhh2Q8C115 1491 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Zfp397Q7TNK4 527 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Secisbp2lQ6A098 1086 aaKnown RBP7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Gcc1Q9D4H2 778 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 CenphQ9QYM8 241 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Phlpp2Q8BXA7 1320 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Tmx3Q8BXZ1 456 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Ccdc39Q9D5Y1 937 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Mcm6P97311 821 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Hspa4Q61316 841 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Gnl2Q99LH1 728 aaKnown RBP7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Tbc1d8Q9Z1A9 1134 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Cfap99A0A140LIX9 648 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Rab3gap2Q8BMG7 1366 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Jakmip1Q8BVL9 626 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Zbtb22Q9Z0G7 638 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Gm21969J3QJZ1 289 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 LarsQ8BMJ2 1178 aa7.1□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Rbm33Q9CXK9 1231 aaKnown RBP7.09□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Q9D9S1 216 aa7.09□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Wdr33Q8K4P0 1330 aaKnown RBP7.09□□□□□ -1.27
Ubr4-201ENSMUST00000097822 CarsQ9ER72 831 aaKnown RBP7.09□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Mnat1P51949 309 aa7.09□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Fan1Q69ZT1 1020 aa7.09□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Kdm4aQ8BW72 1064 aa7.09□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Pde1cQ64338 706 aa7.09□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Snw1Q9CSN1 536 aaKnown RBP7.09□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Kcnn1Q9EQR3 537 aa7.09□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Krt85Q9Z2T6 507 aa7.09□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Ccdc47Q9D024 483 aaKnown RBP7.09□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Zkscan5Q9Z1D8 819 aa7.09□□□□□ -1.27
Ubr4-201ENSMUST00000097822 Stk3Q9JI10 497 aa7.09□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Q8C5K5 320 aa7.09□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ankrd24Q80VM7 985 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Smarcc1P97496 1104 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ciz1Q8VEH2 845 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Gm18336A0A140LIU8 765 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ccdc73Q8CDM4 1066 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Apaf1O88879 1249 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Tbc1d9Q3UYK3 1264 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Phldb2Q8K1N2 1249 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Usp16Q99LG0 825 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Cplx2P84086 134 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ccdc171E9Q1U1 1324 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Bbof1Q3V079 533 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Bloc1s4Q8VED2 215 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Synpo2Q91YE8 1087 aaKnown RBP7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Eif5P59325 429 aaKnown RBP7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Fam107bQ3TGF2 131 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Q4VA45 678 aa7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Dhx29Q6PGC1 1365 aaKnown RBP7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 HmmrQ00547 794 aaKnown RBP7.08□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Eif3aP23116 1344 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms