RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Fam71e1A1L3C1 212 aa8.8□□□□□ -1
Scn3a-201ENSMUST00000066432 Rbm27Q5SFM8 1060 aaKnown RBP8.8□□□□□ -1
Scn3a-201ENSMUST00000066432 Mum1Q6DID5 682 aa8.8□□□□□ -1
Scn3a-201ENSMUST00000066432 Sbno1Q689Z5 1390 aa8.8□□□□□ -1
Scn3a-201ENSMUST00000066432 Abcc2Q8VI47 1543 aa8.8□□□□□ -1
Scn3a-201ENSMUST00000066432 Brpf1B2RRD7 1212 aa8.8□□□□□ -1
Scn3a-201ENSMUST00000066432 Mctp2Q5RJH2 878 aa8.8□□□□□ -1
Scn3a-201ENSMUST00000066432 Ush1cQ9ES64 910 aa8.8□□□□□ -1
Scn3a-201ENSMUST00000066432 Ttc21bQ0HA38 1315 aa8.8□□□□□ -1
Scn3a-201ENSMUST00000066432 Gli2Q0VGT2 1544 aa8.79□□□□□ -1
Scn3a-201ENSMUST00000066432 Dennd4bQ3U1Y4 1499 aa8.79□□□□□ -1
Scn3a-201ENSMUST00000066432 Naip6Q9JIB6 1403 aa8.79□□□□□ -1
Scn3a-201ENSMUST00000066432 Trim29Q8R2Q0 587 aa8.79□□□□□ -1
Scn3a-201ENSMUST00000066432 Sox12Q04890 314 aa8.79□□□□□ -1
Scn3a-201ENSMUST00000066432 Ccdc146E9Q9F7 977 aa8.79□□□□□ -1
Scn3a-201ENSMUST00000066432 Zkscan2G3X952 960 aa8.79□□□□□ -1
Scn3a-201ENSMUST00000066432 Sv2bQ8BG39 683 aa8.79□□□□□ -1
Scn3a-201ENSMUST00000066432 Map3k4O08648 1597 aa8.78□□□□□ -1
Scn3a-201ENSMUST00000066432 Kdm3aQ6PCM1 1323 aa8.78□□□□□ -1
Scn3a-201ENSMUST00000066432 Atf7ipQ7TT18 1306 aa8.78□□□□□ -1
Scn3a-201ENSMUST00000066432 Pip4k2aO70172 405 aa8.78□□□□□ -1
Scn3a-201ENSMUST00000066432 Ncbp1Q3UYV9 790 aaKnown RBP8.78□□□□□ -1
Scn3a-201ENSMUST00000066432 Sin3aQ60520 1274 aaKnown RBP8.78□□□□□ -1
Scn3a-201ENSMUST00000066432 4930572O03RikQ8C5Y0 211 aa8.78□□□□□ -1
Scn3a-201ENSMUST00000066432 Kdm5cP41230 1554 aa8.78□□□□□ -1
Scn3a-201ENSMUST00000066432 Riok1Q922Q2 567 aa8.78□□□□□ -1
Scn3a-201ENSMUST00000066432 Zpr1Q62384 459 aa8.77□□□□□ -1
Scn3a-201ENSMUST00000066432 SetQ9EQU5 289 aaKnown RBP8.77□□□□□ -1
Scn3a-201ENSMUST00000066432 Ints3Q7TPD0 1041 aaKnown RBP8.77□□□□□ -1.01
Scn3a-201ENSMUST00000066432 PdcQ9QW08 244 aa8.77□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Synj2Q9D2G5 1434 aa8.77□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Stard3nlQ9DCI3 235 aa8.77□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Zrsr2Q62377 462 aaKnown RBP8.77□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Ercc6lQ8BHK9 1240 aa8.77□□□□□ -1.01
Scn3a-201ENSMUST00000066432 TimelessQ9R1X4 1197 aa8.77□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Efcab6Q6P1E8 1516 aa8.77□□□□□ -1.01
Scn3a-201ENSMUST00000066432 B4galnt3Q6L8S8 986 aa8.77□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Ppp2r1aQ76MZ3 589 aa8.77□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Ubxn4Q8VCH8 506 aa8.77□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Cep131Q62036 1060 aa8.76□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Ncbp3Q8BZR9 615 aaKnown RBP8.76□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Flad1Q8R123 492 aa8.76□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Ppp1r15aP17564 657 aa8.76□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Gpatch3Q8BIY1 525 aa8.76□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Magi3Q9EQJ9 1476 aa8.76□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Pdcd11Q6NS46 1862 aaKnown RBP8.76□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Kif3cO35066 796 aa8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Eif3bQ8JZQ9 803 aaKnown RBP8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 NaspQ99MD9 773 aaKnown RBP8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Astn2Q80Z10 1352 aa8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Gnai2P08752 355 aaKnown RBP8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Kif20aP97329 887 aa8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Ric3Q8BPM6 367 aa8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Sf3a1Q8K4Z5 791 aaKnown RBP8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Pola1P33609 1465 aa8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Odf2A3KGV1 830 aaKnown RBP8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Cdkl5Q3UTQ8 938 aa8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Usp16Q99LG0 825 aa8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Ak9G3UYQ4 1894 aa8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Slc4a10Q5DTL9 1118 aa8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Clasp1Q80TV8 1535 aaKnown RBP8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Fam208aQ69ZR9 1610 aaKnown RBP8.75□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Sh3bgrQ9WUZ7 214 aa8.74□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Washc2Q6PGL7 1334 aa8.74□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Abca8bQ8K440 1620 aa8.74□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Rbm25B2RY56 838 aaKnown RBP8.74□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Kif4P33174 1231 aa8.74□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Erich6bQ9D4S6 220 aa8.74□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Znf287Q9EQB9 759 aa8.74□□□□□ -1.01
Scn3a-201ENSMUST00000066432 PalldQ9ET54 1408 aa8.74□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Cdk13Q69ZA1 1511 aaKnown RBP8.74□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Tnnt2P50752 301 aa8.74□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Cplx1P63040 134 aa8.74□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Dnttip2Q8R2M2 758 aaKnown RBP8.74□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Rtn4Q99P72 1162 aaKnown RBP8.73□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Gripap1Q8VD04 806 aa8.73□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Pde4dQ01063 747 aa8.73□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Trappc8E9PWG2 1437 aa8.73□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Abcc6Q9R1S7 1498 aa8.73□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Cyp46a1Q9WVK8 500 aa8.73□□□□□ -1.01
Scn3a-201ENSMUST00000066432 CrcpO35427 148 aa8.73□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Q8C5K5 320 aa8.73□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Cfap99A0A140LIX9 648 aa8.72□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Ppp4r3bQ922R5 820 aa8.72□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Dhx9O70133 1380 aaKnown RBP8.72□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Pcmtd1P59913 357 aa8.72□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Necab1Q8BG18 352 aa8.72□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Cc2d1aQ8K1A6 943 aa8.72□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Ccdc34Q3UI66 367 aa8.72□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Cavin1O54724 392 aa8.72□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Noc3lQ8VI84 807 aaKnown RBP8.72□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Luc7lQ9CYI4 371 aaKnown RBP8.72□□□□□ -1.01
Scn3a-201ENSMUST00000066432 SrrtQ99MR6 875 aaKnown RBP8.72□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Trim34bJ3QNR8 485 aa8.72□□□□□ -1.01
Scn3a-201ENSMUST00000066432 AppP12023 770 aa8.72□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Znf518aB2RRF6 1478 aaKnown RBP8.71□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Dennd6aQ8BH65 605 aa8.71□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Erc1Q99MI1 1120 aa8.71□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Cdk19Q8BWD8 501 aa8.71□□□□□ -1.01
Scn3a-201ENSMUST00000066432 Ppp2r3aB2RXC8 1150 aa8.71□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 6.4 ms