RNA–Protein interactions for RNA: ENSMUST00000064129.13

Ttc39a-201, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ttc39a, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-201ENSMUST00000064129 Tnrc6bQ8BKI2 1810 aaKnown RBP22.52■■□□□ 1.2
Ttc39a-201ENSMUST00000064129 Ncbp3Q8BZR9 615 aaKnown RBP22.52■■□□□ 1.2
Ttc39a-201ENSMUST00000064129 Rreb1Q3UH06 1700 aaKnown RBP22.51■■□□□ 1.19
Ttc39a-201ENSMUST00000064129 CatipB9EKE5 520 aa22.5■■□□□ 1.19
Ttc39a-201ENSMUST00000064129 Birc3O08863 600 aa22.5■■□□□ 1.19
Ttc39a-201ENSMUST00000064129 Slc12a5Q91V14 1138 aa22.5■■□□□ 1.19
Ttc39a-201ENSMUST00000064129 Mapk8ip3Q9ESN9 1337 aa22.5■■□□□ 1.19
Ttc39a-201ENSMUST00000064129 Dusp27Q148W8 1138 aa22.49■■□□□ 1.19
Ttc39a-201ENSMUST00000064129 Q3UJC8 639 aa22.49■■□□□ 1.19
Ttc39a-201ENSMUST00000064129 Znf541Q0GGX2 1363 aa22.49■■□□□ 1.19
Ttc39a-201ENSMUST00000064129 Sirt1Q923E4 737 aa22.46■■□□□ 1.19
Ttc39a-201ENSMUST00000064129 PalmQ9Z0P4 383 aa22.46■■□□□ 1.19
Ttc39a-201ENSMUST00000064129 Bcl9Q9D219 1425 aa22.46■■□□□ 1.19
Ttc39a-201ENSMUST00000064129 N4bp2F8VQG7 1678 aaKnown RBP22.45■■□□□ 1.19
Ttc39a-201ENSMUST00000064129 Uhrf1bp1B2KF50 1429 aa22.45■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 Ppp1r15aP17564 657 aa22.44■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 Uhrf1bp1lA2RSJ4 1457 aa22.44■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 Cavin4A2AMM0 362 aa22.43■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 Ksr2Q3UVC0 959 aa22.43■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 Lmtk3Q5XJV6 1424 aa22.43■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 Kdm2bQ6P1G2 1309 aa22.43■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 D430041D05RikF6ZGR6 1678 aa22.43■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 Ciz1Q8VEH2 845 aa22.42■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 Fchsd2Q3USJ8 740 aa22.41■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 Chd4Q6PDQ2 1915 aaKnown RBP22.41■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 PaskQ8CEE6 1383 aa22.41■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 MyclP10166 368 aa22.4■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 Q4VA45 678 aa22.4■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 Pak3Q61036 559 aa22.39■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 Polr3glQ8R0C0 218 aa22.39■■□□□ 1.18
Ttc39a-201ENSMUST00000064129 Abcc10Q8R4P9 1501 aa22.39■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Hoxb7P09024 217 aa22.39■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Ccar1Q8CH18 1146 aaKnown RBP22.39■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Kif20bQ80WE4 1774 aaKnown RBP22.38■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Astn2Q80Z10 1352 aa22.38■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 GphnQ8BUV3 769 aaKnown RBP22.38■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Pank1Q8K4K6 548 aa22.38■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 C5P06684 1680 aa22.36■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Trim58Q5NCC9 485 aa22.36■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Tspyl2Q7TQI8 677 aa22.36■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Trim26Q99PN3 545 aa22.36■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Fam135bQ9DAI6 1403 aa22.36■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Znf335A2A5K6 1337 aa22.36■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Rsph6aQ8CDR2 708 aa22.35■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 NgefQ8CHT1 710 aa22.35■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Als2Q920R0 1651 aa22.35■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Ttc21aQ8C0S4 1314 aa22.34■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Ankrd50F7BE84 1390 aa22.34■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Atp7bQ64446 1462 aa22.34■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Ecm2Q5FW85 670 aa22.33■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Znf521Q6KAS7 1311 aa22.33■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Spef2Q8C9J3 1734 aa22.33■■□□□ 1.17
Ttc39a-201ENSMUST00000064129 Topaz1E5FYH1 1653 aa22.33■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Mon2Q80TL7 1715 aa22.33■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Swt1Q9DBQ9 907 aa22.33■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Rims2Q9EQZ7 1530 aa22.32■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Med1Q925J9 1575 aa22.32■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Zmym3Q9JLM4 1370 aa22.32■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Sox12Q04890 314 aa22.31■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Egfem1Q8C088 590 aa22.31■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 NalcnQ8BXR5 1738 aa22.31■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Idi1P58044 227 aa22.31■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Pik3c2aQ61194 1686 aa22.3■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Mdc1Q5PSV9 1707 aa22.3■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Ttll13A4Q9F6 804 aa22.3■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Gm10563F6WIE4 79 aa22.3■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 CastP51125 788 aa22.29■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 CemipQ8BI06 1361 aa22.29■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Cdk12Q14AX6 1484 aaKnown RBP22.28■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Rbm25B2RY56 838 aaKnown RBP22.28■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Tmem94Q7TSH8 1360 aa22.27■■□□□ 1.16
Ttc39a-201ENSMUST00000064129 Mcm10Q0VBD2 885 aa22.26■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 Col16a1Q8BLX7 1580 aa22.26■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 B4galnt3Q6L8S8 986 aa22.26■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 Eif4a2P10630 407 aa22.25■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 Smc5Q8CG46 1101 aaKnown RBP22.25■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 Ubr1O70481 1757 aa22.25■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 Alpk3Q924C5 1678 aa22.23■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 Cabp2Q9JLK4 216 aa22.23■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 Duxf3A0A0N4SV92 674 aa22.22■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 NudcO35685 332 aaKnown RBP22.22■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 Ap3b2Q9JME5 1082 aa22.22■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 C3P01027 1663 aa22.22■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 Ccdc60Q8C4J0 545 aa22.21■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 Chmp5Q9D7S9 219 aa22.21■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 Scn7aB1AYL1 1681 aa22.21■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 Cdc37l1Q9CZP7 335 aa22.2■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 EspnQ9ET47 871 aa22.2■■□□□ 1.15
Ttc39a-201ENSMUST00000064129 Dbr1Q923B1 550 aa22.2■■□□□ 1.14
Ttc39a-201ENSMUST00000064129 Ccdc171E9Q1U1 1324 aa22.2■■□□□ 1.14
Ttc39a-201ENSMUST00000064129 Map2P20357 1828 aa22.2■■□□□ 1.14
Ttc39a-201ENSMUST00000064129 MpripP97434 1024 aa22.19■■□□□ 1.14
Ttc39a-201ENSMUST00000064129 MlecQ6ZQI3 291 aaKnown RBP22.19■■□□□ 1.14
Ttc39a-201ENSMUST00000064129 Frmpd2A0A140LI67 1392 aa22.19■■□□□ 1.14
Ttc39a-201ENSMUST00000064129 Dennd6aQ8BH65 605 aa22.19■■□□□ 1.14
Ttc39a-201ENSMUST00000064129 FancaQ9JL70 1439 aa22.19■■□□□ 1.14
Ttc39a-201ENSMUST00000064129 Camta1A2A891 1682 aa22.19■■□□□ 1.14
Ttc39a-201ENSMUST00000064129 Plin1Q8CGN5 517 aa22.18■■□□□ 1.14
Ttc39a-201ENSMUST00000064129 Ppp1r3fQ9JIG4 799 aa22.18■■□□□ 1.14
Ttc39a-201ENSMUST00000064129 AampJ3QN89 436 aa22.18■■□□□ 1.14
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms