RNA–Protein interactions for RNA: ENSMUST00000029446.12

Csde1-201, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Csde1, Length 4,318 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-201ENSMUST00000029446 Pdcl3Q8BVF2 240 aa8.92□□□□□ -0.98
Csde1-201ENSMUST00000029446 Ccdc30Q8BVF4 654 aa8.92□□□□□ -0.98
Csde1-201ENSMUST00000029446 NudcO35685 332 aaKnown RBP8.92□□□□□ -0.98
Csde1-201ENSMUST00000029446 Ciz1Q8VEH2 845 aa8.92□□□□□ -0.98
Csde1-201ENSMUST00000029446 Naip7Q9JIB3 1402 aa8.92□□□□□ -0.98
Csde1-201ENSMUST00000029446 Iqcf3Q9D498 203 aa8.92□□□□□ -0.98
Csde1-201ENSMUST00000029446 Arhgap23Q69ZH9 1483 aa8.92□□□□□ -0.98
Csde1-201ENSMUST00000029446 L3mbtl2P59178 703 aa8.91□□□□□ -0.98
Csde1-201ENSMUST00000029446 DmtnQ9WV69 405 aa8.91□□□□□ -0.98
Csde1-201ENSMUST00000029446 Kank1E9Q238 1360 aa8.91□□□□□ -0.98
Csde1-201ENSMUST00000029446 Plekhg1F6S200 1446 aa8.91□□□□□ -0.98
Csde1-201ENSMUST00000029446 Map4k4P97820 1233 aaKnown RBP8.91□□□□□ -0.98
Csde1-201ENSMUST00000029446 Gprasp1Q5U4C1 1347 aa8.91□□□□□ -0.98
Csde1-201ENSMUST00000029446 1700019A02RikA0A087WPV9 146 aa8.91□□□□□ -0.98
Csde1-201ENSMUST00000029446 ChgaP26339 463 aaKnown RBP8.91□□□□□ -0.98
Csde1-201ENSMUST00000029446 Trpm1Q2TV84 1622 aa8.91□□□□□ -0.98
Csde1-201ENSMUST00000029446 Plin1Q8CGN5 517 aa8.9□□□□□ -0.98
Csde1-201ENSMUST00000029446 Spryd3E9Q9B3 442 aa8.89□□□□□ -0.99
Csde1-201ENSMUST00000029446 Ppm1gQ61074 542 aa8.89□□□□□ -0.99
Csde1-201ENSMUST00000029446 MlecQ6ZQI3 291 aaKnown RBP8.89□□□□□ -0.99
Csde1-201ENSMUST00000029446 ArsiQ32KI9 573 aa8.89□□□□□ -0.99
Csde1-201ENSMUST00000029446 GphnQ8BUV3 769 aaKnown RBP8.89□□□□□ -0.99
Csde1-201ENSMUST00000029446 CltcQ68FD5 1675 aaKnown RBP8.89□□□□□ -0.99
Csde1-201ENSMUST00000029446 Skap1Q3UUV5 355 aa8.89□□□□□ -0.99
Csde1-201ENSMUST00000029446 Ccar1Q8CH18 1146 aaKnown RBP8.89□□□□□ -0.99
Csde1-201ENSMUST00000029446 HnrnpmQ9D0E1 729 aaKnown RBP8.89□□□□□ -0.99
Csde1-201ENSMUST00000029446 DnmbpQ6TXD4 1580 aa8.88□□□□□ -0.99
Csde1-201ENSMUST00000029446 Chmp4bQ9D8B3 224 aaKnown RBP8.88□□□□□ -0.99
Csde1-201ENSMUST00000029446 Cluap1Q8R3P7 413 aa8.88□□□□□ -0.99
Csde1-201ENSMUST00000029446 Ap3b2Q9JME5 1082 aa8.88□□□□□ -0.99
Csde1-201ENSMUST00000029446 Sparcl1P70663 650 aa8.87□□□□□ -0.99
Csde1-201ENSMUST00000029446 Ksr2Q3UVC0 959 aa8.87□□□□□ -0.99
Csde1-201ENSMUST00000029446 Idi2Q8BFZ6 227 aa8.87□□□□□ -0.99
Csde1-201ENSMUST00000029446 MaddQ80U28 1577 aa8.87□□□□□ -0.99
Csde1-201ENSMUST00000029446 Znf330Q922H9 316 aa8.87□□□□□ -0.99
Csde1-201ENSMUST00000029446 Prkrip1Q9CWV6 186 aaKnown RBP8.87□□□□□ -0.99
Csde1-201ENSMUST00000029446 NinlQ6ZQ12 1394 aa8.87□□□□□ -0.99
Csde1-201ENSMUST00000029446 Sox12Q04890 314 aa8.86□□□□□ -0.99
Csde1-201ENSMUST00000029446 Chrna2Q91X60 512 aa8.86□□□□□ -0.99
Csde1-201ENSMUST00000029446 Ipo9Q91YE6 1041 aa8.86□□□□□ -0.99
Csde1-201ENSMUST00000029446 Cdk5rap2Q8K389 1822 aa8.86□□□□□ -0.99
Csde1-201ENSMUST00000029446 Ncbp3Q8BZR9 615 aaKnown RBP8.86□□□□□ -0.99
Csde1-201ENSMUST00000029446 EspnQ9ET47 871 aa8.86□□□□□ -0.99
Csde1-201ENSMUST00000029446 PzpQ61838 1495 aa8.86□□□□□ -0.99
Csde1-201ENSMUST00000029446 Q3UJC8 639 aa8.85□□□□□ -0.99
Csde1-201ENSMUST00000029446 Pak3Q61036 559 aa8.85□□□□□ -0.99
Csde1-201ENSMUST00000029446 Scaf11E9PZM7 1456 aaKnown RBP8.85□□□□□ -0.99
Csde1-201ENSMUST00000029446 Kcnh8P59111 1102 aa8.85□□□□□ -0.99
Csde1-201ENSMUST00000029446 Uspl1Q3ULM6 1089 aa8.85□□□□□ -0.99
Csde1-201ENSMUST00000029446 Zranb1Q7M760 708 aa8.85□□□□□ -0.99
Csde1-201ENSMUST00000029446 Tmco5bQ80X59 307 aa8.85□□□□□ -0.99
Csde1-201ENSMUST00000029446 Rrp9Q91WM3 475 aaKnown RBP8.85□□□□□ -0.99
Csde1-201ENSMUST00000029446 KdrP35918 1367 aa8.85□□□□□ -0.99
Csde1-201ENSMUST00000029446 Asxl2Q8BZ32 1370 aa8.85□□□□□ -0.99
Csde1-201ENSMUST00000029446 Cavin4A2AMM0 362 aa8.85□□□□□ -0.99
Csde1-201ENSMUST00000029446 Fchsd2Q3USJ8 740 aa8.85□□□□□ -0.99
Csde1-201ENSMUST00000029446 Dnai1Q8C0M8 701 aa8.85□□□□□ -0.99
Csde1-201ENSMUST00000029446 Apaf1O88879 1249 aa8.84□□□□□ -0.99
Csde1-201ENSMUST00000029446 Plcb2A3KGF7 1181 aa8.84□□□□□ -1
Csde1-201ENSMUST00000029446 Fbxo2Q80UW2 297 aa8.83□□□□□ -1
Csde1-201ENSMUST00000029446 Swt1Q9DBQ9 907 aa8.83□□□□□ -1
Csde1-201ENSMUST00000029446 Ercc6l2Q9JIM3 1537 aa8.83□□□□□ -1
Csde1-201ENSMUST00000029446 PtprmP28828 1452 aa8.83□□□□□ -1
Csde1-201ENSMUST00000029446 Ppp1r15aP17564 657 aa8.83□□□□□ -1
Csde1-201ENSMUST00000029446 U2surpQ6NV83 1029 aaKnown RBP8.83□□□□□ -1
Csde1-201ENSMUST00000029446 Ube2q2Q8K2Z8 378 aa8.83□□□□□ -1
Csde1-201ENSMUST00000029446 Stk31Q99MW1 1018 aa8.83□□□□□ -1
Csde1-201ENSMUST00000029446 Qser1A2BIE1 1698 aa8.82□□□□□ -1
Csde1-201ENSMUST00000029446 Trim58Q5NCC9 485 aa8.82□□□□□ -1
Csde1-201ENSMUST00000029446 Cul9Q80TT8 1865 aa8.82□□□□□ -1
Csde1-201ENSMUST00000029446 Tubgcp6G5E8P0 1769 aa8.82□□□□□ -1
Csde1-201ENSMUST00000029446 Map3k19E9Q3S4 1311 aa8.82□□□□□ -1
Csde1-201ENSMUST00000029446 Hoxb7P09024 217 aa8.82□□□□□ -1
Csde1-201ENSMUST00000029446 Dusp27Q148W8 1138 aa8.81□□□□□ -1
Csde1-201ENSMUST00000029446 Htatsf1Q8BGC0 757 aa8.81□□□□□ -1
Csde1-201ENSMUST00000029446 Cabp4Q8VHC5 271 aa8.81□□□□□ -1
Csde1-201ENSMUST00000029446 Pik3r4Q8VD65 1358 aa8.8□□□□□ -1
Csde1-201ENSMUST00000029446 PalmQ9Z0P4 383 aa8.8□□□□□ -1
Csde1-201ENSMUST00000029446 Rtf1A2AQ19 715 aaKnown RBP8.8□□□□□ -1
Csde1-201ENSMUST00000029446 Dip2aQ8BWT5 1523 aa8.8□□□□□ -1
Csde1-201ENSMUST00000029446 Arhgef28P97433 1693 aa8.8□□□□□ -1
Csde1-201ENSMUST00000029446 Med14A2ABV5 1459 aaKnown RBP8.79□□□□□ -1
Csde1-201ENSMUST00000029446 Kiaa1107Q80TK0 1369 aa8.79□□□□□ -1
Csde1-201ENSMUST00000029446 Gm21190A0A0G2JGJ6 266 aa8.79□□□□□ -1
Csde1-201ENSMUST00000029446 Usp19Q3UJD6 1360 aa8.79□□□□□ -1
Csde1-201ENSMUST00000029446 Slc12a5Q91V14 1138 aa8.79□□□□□ -1
Csde1-201ENSMUST00000029446 Cep170bQ80U49 1574 aa8.79□□□□□ -1
Csde1-201ENSMUST00000029446 Ccdc171E9Q1U1 1324 aa8.79□□□□□ -1
Csde1-201ENSMUST00000029446 Ttc41Q692V3 1318 aa8.79□□□□□ -1
Csde1-201ENSMUST00000029446 Gnai1B2RSH2 354 aa8.78□□□□□ -1
Csde1-201ENSMUST00000029446 Rab11fip3Q8CHD8 1047 aa8.78□□□□□ -1
Csde1-201ENSMUST00000029446 Gtf2a1Q99PM3 378 aa8.78□□□□□ -1
Csde1-201ENSMUST00000029446 Gnai3Q9DC51 354 aa8.78□□□□□ -1
Csde1-201ENSMUST00000029446 PaskQ8CEE6 1383 aa8.78□□□□□ -1
Csde1-201ENSMUST00000029446 Rbm25B2RY56 838 aaKnown RBP8.78□□□□□ -1
Csde1-201ENSMUST00000029446 Ccdc60Q8C4J0 545 aa8.78□□□□□ -1
Csde1-201ENSMUST00000029446 Sirt1Q923E4 737 aa8.78□□□□□ -1
Csde1-201ENSMUST00000029446 Erbb3Q61526 1339 aa8.78□□□□□ -1
Csde1-201ENSMUST00000029446 Map7O88735 730 aa8.78□□□□□ -1
Csde1-201ENSMUST00000029446 Astn2Q80Z10 1352 aa8.78□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms