RNA–Protein interactions for RNA: ENSMUST00000029446.12

Csde1-201, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Csde1, Length 4,318 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-201ENSMUST00000029446 NischQ80TM9 1593 aa13.36□□□□□ -0.27
Csde1-201ENSMUST00000029446 Gm35339A0A140LHH9 1649 aa13□□□□□ -0.33
Csde1-201ENSMUST00000029446 Abcc9P70170 1546 aa12.89□□□□□ -0.35
Csde1-201ENSMUST00000029446 Chic1Q8CBW7 227 aa12.76□□□□□ -0.37
Csde1-201ENSMUST00000029446 Mapk8ip2Q9ERE9 830 aa12.66□□□□□ -0.38
Csde1-201ENSMUST00000029446 Abcc8B2RUS7 1588 aa12.65□□□□□ -0.38
Csde1-201ENSMUST00000029446 Rhox8Q6VSS7 320 aa12.63□□□□□ -0.39
Csde1-201ENSMUST00000029446 Rtl1Q7M732 1744 aa11.97□□□□□ -0.49
Csde1-201ENSMUST00000029446 Dcaf1Q80TR8 1506 aa11.82□□□□□ -0.52
Csde1-201ENSMUST00000029446 ScribQ80U72 1612 aa11.75□□□□□ -0.53
Csde1-201ENSMUST00000029446 Ccdc180J3QNE4 1664 aa11.74□□□□□ -0.53
Csde1-201ENSMUST00000029446 Rb1cc1Q9ESK9 1588 aa11.71□□□□□ -0.54
Csde1-201ENSMUST00000029446 NacadQ5SWP3 1504 aa11.68□□□□□ -0.54
Csde1-201ENSMUST00000029446 Kdm5dQ62240 1548 aa11.64□□□□□ -0.55
Csde1-201ENSMUST00000029446 Ccdc136Q3TVA9 1136 aa11.59□□□□□ -0.55
Csde1-201ENSMUST00000029446 Baz1aO88379 1555 aa11.56□□□□□ -0.56
Csde1-201ENSMUST00000029446 Zcchc6Q5BLK4 1491 aaKnown RBP11.52□□□□□ -0.57
Csde1-201ENSMUST00000029446 Trim41Q5NCC3 630 aa11.47□□□□□ -0.57
Csde1-201ENSMUST00000029446 Ehmt2Q9Z148 1263 aaKnown RBP11.41□□□□□ -0.58
Csde1-201ENSMUST00000029446 Crybg2B7ZCC2 1516 aa11.37□□□□□ -0.59
Csde1-201ENSMUST00000029446 Sycp2Q9CUU3 1500 aa11.36□□□□□ -0.59
Csde1-201ENSMUST00000029446 Phf23Q8BSN5 401 aa11.35□□□□□ -0.59
Csde1-201ENSMUST00000029446 HrcG5E8J6 738 aa11.31□□□□□ -0.6
Csde1-201ENSMUST00000029446 Amer1Q7TS75 1132 aa11.28□□□□□ -0.6
Csde1-201ENSMUST00000029446 Cngb1E1AZ71 1325 aa11.21□□□□□ -0.61
Csde1-201ENSMUST00000029446 Esf1Q3V1V3 845 aaKnown RBP11.21□□□□□ -0.62
Csde1-201ENSMUST00000029446 Smarca2Q6DIC0 1577 aa11.2□□□□□ -0.62
Csde1-201ENSMUST00000029446 DiexfQ8BTT6 772 aaKnown RBP11.2□□□□□ -0.62
Csde1-201ENSMUST00000029446 Brd4Q9ESU6 1400 aaKnown RBP11.18□□□□□ -0.62
Csde1-201ENSMUST00000029446 Rpgrip1Q9EPQ2 1331 aa11.17□□□□□ -0.62
Csde1-201ENSMUST00000029446 Las1lA2BE28 776 aaKnown RBP11.07□□□□□ -0.64
Csde1-201ENSMUST00000029446 Cecr2E9Q2Z1 1453 aa10.98□□□□□ -0.65
Csde1-201ENSMUST00000029446 BicraF8VPZ9 1578 aa10.98□□□□□ -0.65
Csde1-201ENSMUST00000029446 Cep164Q5DU05 1446 aa10.95□□□□□ -0.66
Csde1-201ENSMUST00000029446 Gab3Q8BSM5 595 aa10.95□□□□□ -0.66
Csde1-201ENSMUST00000029446 Golga3P55937 1487 aa10.93□□□□□ -0.66
Csde1-201ENSMUST00000029446 CenpbP27790 599 aa10.91□□□□□ -0.66
Csde1-201ENSMUST00000029446 Plppr3Q7TPB0 716 aa10.9□□□□□ -0.67
Csde1-201ENSMUST00000029446 CftrP26361 1476 aa10.89□□□□□ -0.67
Csde1-201ENSMUST00000029446 Synj1Q8CHC4 1574 aa10.88□□□□□ -0.67
Csde1-201ENSMUST00000029446 Smarca4Q3TKT4 1613 aaKnown RBP10.88□□□□□ -0.67
Csde1-201ENSMUST00000029446 Pds5bQ4VA53 1446 aaKnown RBP10.85□□□□□ -0.67
Csde1-201ENSMUST00000029446 Myt1Q8CFC2 1127 aa10.85□□□□□ -0.67
Csde1-201ENSMUST00000029446 Cttnbp2B9EJA2 1648 aa10.84□□□□□ -0.67
Csde1-201ENSMUST00000029446 Atad2bE9Q166 1460 aaKnown RBP10.8□□□□□ -0.68
Csde1-201ENSMUST00000029446 Rsf1E9PWW9 1441 aaKnown RBP10.77□□□□□ -0.68
Csde1-201ENSMUST00000029446 Acin1Q9JIX8 1338 aaKnown RBP10.77□□□□□ -0.69
Csde1-201ENSMUST00000029446 Zeb1Q64318 1117 aa10.77□□□□□ -0.69
Csde1-201ENSMUST00000029446 Npm2Q80W85 207 aa10.76□□□□□ -0.69
Csde1-201ENSMUST00000029446 Iqgap2Q3UQ44 1575 aa10.74□□□□□ -0.69
Csde1-201ENSMUST00000029446 Ercc6F8VPZ5 1481 aa10.73□□□□□ -0.69
Csde1-201ENSMUST00000029446 Ccdc88bQ4QRL3 1481 aa10.71□□□□□ -0.7
Csde1-201ENSMUST00000029446 Ttbk1Q6PCN3 1308 aa10.71□□□□□ -0.7
Csde1-201ENSMUST00000029446 Fmn1Q05860 1466 aa10.68□□□□□ -0.7
Csde1-201ENSMUST00000029446 Myt1lP97500 1187 aa10.66□□□□□ -0.7
Csde1-201ENSMUST00000029446 Wdr66E9Q743 1299 aa10.65□□□□□ -0.7
Csde1-201ENSMUST00000029446 Il27Q8K3I6 234 aa10.64□□□□□ -0.71
Csde1-201ENSMUST00000029446 Top2bQ64511 1612 aa10.62□□□□□ -0.71
Csde1-201ENSMUST00000029446 Pcgf6Q99NA9 353 aa10.61□□□□□ -0.71
Csde1-201ENSMUST00000029446 Kif15Q6P9L6 1387 aa10.57□□□□□ -0.72
Csde1-201ENSMUST00000029446 Cc2d2aQ8CFW7 1633 aa10.55□□□□□ -0.72
Csde1-201ENSMUST00000029446 Npm1Q61937 292 aaKnown RBP10.53□□□□□ -0.72
Csde1-201ENSMUST00000029446 Ubl4bQ9CQ84 188 aa10.53□□□□□ -0.72
Csde1-201ENSMUST00000029446 UbtfP25976 765 aaKnown RBP10.52□□□□□ -0.73
Csde1-201ENSMUST00000029446 Frmpd1A2AKB4 1549 aa10.52□□□□□ -0.73
Csde1-201ENSMUST00000029446 Wdr62Q3U3T8 1523 aa10.51□□□□□ -0.73
Csde1-201ENSMUST00000029446 Ccdc18Q640L5 1455 aa10.49□□□□□ -0.73
Csde1-201ENSMUST00000029446 Phldb1Q6PDH0 1371 aaKnown RBP10.49□□□□□ -0.73
Csde1-201ENSMUST00000029446 Top2aQ01320 1528 aaKnown RBP10.48□□□□□ -0.73
Csde1-201ENSMUST00000029446 Bcl11aQ9QYE3 773 aa10.47□□□□□ -0.73
Csde1-201ENSMUST00000029446 Rapgef2Q8CHG7 1496 aa10.45□□□□□ -0.74
Csde1-201ENSMUST00000029446 NefmP08553 848 aa10.44□□□□□ -0.74
Csde1-201ENSMUST00000029446 Cep162Q6ZQ06 1403 aa10.43□□□□□ -0.74
Csde1-201ENSMUST00000029446 Clip1Q922J3 1391 aa10.39□□□□□ -0.75
Csde1-201ENSMUST00000029446 Lamc3Q9R0B6 1581 aa10.38□□□□□ -0.75
Csde1-201ENSMUST00000029446 Ube2uB1AUC4 352 aa10.38□□□□□ -0.75
Csde1-201ENSMUST00000029446 Cux2P70298 1426 aa10.37□□□□□ -0.75
Csde1-201ENSMUST00000029446 Senp3Q9EP97 568 aaKnown RBP10.36□□□□□ -0.75
Csde1-201ENSMUST00000029446 TnnQ80Z71 1560 aa10.35□□□□□ -0.75
Csde1-201ENSMUST00000029446 Supt5hO55201 1082 aaKnown RBP10.34□□□□□ -0.75
Csde1-201ENSMUST00000029446 Mier1Q5UAK0 511 aa10.34□□□□□ -0.75
Csde1-201ENSMUST00000029446 Ap3b1Q9Z1T1 1105 aa10.32□□□□□ -0.76
Csde1-201ENSMUST00000029446 Ppargc1bQ8VHJ7 1014 aa10.3□□□□□ -0.76
Csde1-201ENSMUST00000029446 Camsap1A2AHC3 1581 aa10.3□□□□□ -0.76
Csde1-201ENSMUST00000029446 Eea1Q8BL66 1411 aa10.29□□□□□ -0.76
Csde1-201ENSMUST00000029446 Plekhg3Q4VAC9 1341 aa10.29□□□□□ -0.76
Csde1-201ENSMUST00000029446 NrkQ9R0G8 1455 aa10.29□□□□□ -0.76
Csde1-201ENSMUST00000029446 Thoc2B1AZI6 1594 aaKnown RBP10.29□□□□□ -0.76
Csde1-201ENSMUST00000029446 Shroom4Q1W617 1475 aa10.29□□□□□ -0.76
Csde1-201ENSMUST00000029446 Setd5Q5XJV7 1441 aa10.28□□□□□ -0.76
Csde1-201ENSMUST00000029446 LrpprcQ6PB66 1392 aaKnown RBP10.27□□□□□ -0.77
Csde1-201ENSMUST00000029446 Grin2bQ01097 1482 aa10.25□□□□□ -0.77
Csde1-201ENSMUST00000029446 Fam135aQ6NS59 1506 aa10.24□□□□□ -0.77
Csde1-201ENSMUST00000029446 Baz1bQ9Z277 1479 aa10.24□□□□□ -0.77
Csde1-201ENSMUST00000029446 Arhgap35Q91YM2 1499 aa10.23□□□□□ -0.77
Csde1-201ENSMUST00000029446 Efcab5A0JP43 1406 aa10.22□□□□□ -0.77
Csde1-201ENSMUST00000029446 Map3k1P53349 1493 aa10.22□□□□□ -0.77
Csde1-201ENSMUST00000029446 Pelp1Q9DBD5 1123 aaKnown RBP10.21□□□□□ -0.77
Csde1-201ENSMUST00000029446 PtprkP35822 1457 aa10.21□□□□□ -0.78
Csde1-201ENSMUST00000029446 Dhx29Q6PGC1 1365 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms